Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g008980.2.1
CDS Infomation

Delta
Sequence

ATGGAGTGTGTTGGAGCTCAAAATGTTGGAGCAATGGCAGTTTTTACGCGTCCGAGATTG
AAACCGTTGGTCGGGAGGAGAGTTATGCCAAGAAAAAAGCAATCTTTTTGGCGTATGAGC
AGTATGAAAGTAAAATGTAATAGCAGTAGTGGTAGTGACAGTTGTGTAGTTGATAAAGAA
GATTTTGCTGATGAAGAAGATTATATAAAAGCCGGTGGTTCGCAACTTGTATTTGTTCAA
ATGCAGCAGAAAAAAGATATGGATCAGCAGTCTAAGCTTTCTGATGAGCATACTATATTG
CTTTGTTCATCATACTATCTCAGCTTGCAGTTACGACAAATATCTGCTGGACAAACCGTA
CTGGATTTAGTGGTAATCGGCTGTGGTCCTGCTGGTCTTGCTCTTGCCGCGGAGTCAGCT
AAATTGGGGTTGAACGTGGGGCTCGTTGGGCCTGATCTTCCTTTCACAAACAACTATGGT
GTATGGGAGGACGAGTTCAAAGATCTTGGTCTTCAAGCCTGCATTGAACATGTTTGGCGG
GATACCATTGTATATCTTGATGATGATGAACCTATTCTTATTGGCCGTGCCTATGGAAGA
GTTAGTCGCCATTTTCTGCACGAGGAGTTACTCAAAAGGTGTGTGGAGGCAGGTGTTTTG
TATCTAAACTCGAAAGTGGATAGGATTGTTGAGGCCACAAATGGCCAGAGTCTTGTAGAG
TGCGAGGGTGATGTTGTGATTCCCTGCAGGTTTGTGACTGTTGCATCGGGGGCAGCCTCG
GGGAAATTCTTGCAGTATGAGTTGGGAGGTCCTAGAGTTTCTGTTCAAACAGCTTATGGA
GTGGAAGTTGAGGTTGATAACAATCCATTTGACCCGAGCCTGATGGTTTTCATGGATTAT
AGAGATTATGTCAGACACGACGCTCAATCTTTAGAAGCTAAATATCCAACATTTCTTTAT
GCCATGCCCATGTCTCCAACACGAGAAACTTGTTTGGCTTCAAAAGATGCAATGCCATTC
GATCTGTTAAAGAAAAAACTGATGCTACGATTGAACACCCTTGGTGTAAGAATTAAAGAA
ATTTACGAGGAGGAATGGTCTTACATACCGGTTGGTGGATCTTTGCCAAATACAGAACAA
AAAACACTTGCATTTGGTGCTGCTGCTAGCATGGTTCATCCAGCCACAGGTTATTCAGTC
GTCAGATCACTTTCTGAAGCTCCAAAATGCGCCTCTGTACTTGCAAATATATTACGACAA
CATTATAGCAAGAACATGCTTACCAGTTCAAGTATCCCGAGTATATCAACTCAAGCTTGG
AACACTCTTTGGCCACAAGAACGAAAACGACAAAGATCGTTTTTCCTATTTGGACTGGCT
CTGATATTGCAGCTGGATATTGAGGGGATAAGGTCATTTTTCCGCGCATTCTTCCGTGTG
CCAAAATGGATGTGGCAGGGATTTCTTGGTTCAAGTCTTTCTTCAGCAGACCTCATGTTA
TTTGCCTTCTACATGTTTATTATTGCACCAAATGACATGAGAAAAGGCTTGATCAGACAT
CTTTTATCTGATCCTACTGGTGCAACATTGATAAGAACTTATCTTACATTTTAG

Peptide Sequence

PEP ID

Solyc12g008980.2.1
PEP Infomation

Delta
Sequence

MECVGAQNVGAMAVFTRPRLKPLVGRRVMPRKKQSFWRMSSMKVKCNSSSGSDSCVVDKE
DFADEEDYIKAGGSQLVFVQMQQKKDMDQQSKLSDEHTILLCSSYYLSLQLRQISAGQTV
LDLVVIGCGPAGLALAAESAKLGLNVGLVGPDLPFTNNYGVWEDEFKDLGLQACIEHVWR
DTIVYLDDDEPILIGRAYGRVSRHFLHEELLKRCVEAGVLYLNSKVDRIVEATNGQSLVE
CEGDVVIPCRFVTVASGAASGKFLQYELGGPRVSVQTAYGVEVEVDNNPFDPSLMVFMDY
RDYVRHDAQSLEAKYPTFLYAMPMSPTRETCLASKDAMPFDLLKKKLMLRLNTLGVRIKE
IYEEEWSYIPVGGSLPNTEQKTLAFGAAASMVHPATGYSVVRSLSEAPKCASVLANILRQ
HYSKNMLTSSSIPSISTQAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRV
PKWMWQGFLGSSLSSADLMLFAFYMFIIAPNDMRKGLIRHLLSDPTGATLIRTYLTF*

Transcript Sequence

Transcript ID

Solyc12g008980.2.1
Transcript Infomation

Delta
Sequence

ATCCGTATAACTTATTCTCTCTGTTTTCCTCCATCCAAAAAAAAACAGCAAAATTCCCAA
AATCTATATCAAATTAATCTTCAATTCTTGCAAATTTCTTCAAGATTTTTCAGTTTTCGA
ACACCCAATTGACTAAAATAATGGAAAAAGATCTCAGATTTTGAACATTTTTGAAGAAAA
AAGAAGCAAAGAAGCTAAGATAAAAGGGGATATACTTGAAAATGGAGTGTGTTGGAGCTC
AAAATGTTGGAGCAATGGCAGTTTTTACGCGTCCGAGATTGAAACCGTTGGTCGGGAGGA
GAGTTATGCCAAGAAAAAAGCAATCTTTTTGGCGTATGAGCAGTATGAAAGTAAAATGTA
ATAGCAGTAGTGGTAGTGACAGTTGTGTAGTTGATAAAGAAGATTTTGCTGATGAAGAAG
ATTATATAAAAGCCGGTGGTTCGCAACTTGTATTTGTTCAAATGCAGCAGAAAAAAGATA
TGGATCAGCAGTCTAAGCTTTCTGATGAGCATACTATATTGCTTTGTTCATCATACTATC
TCAGCTTGCAGTTACGACAAATATCTGCTGGACAAACCGTACTGGATTTAGTGGTAATCG
GCTGTGGTCCTGCTGGTCTTGCTCTTGCCGCGGAGTCAGCTAAATTGGGGTTGAACGTGG
GGCTCGTTGGGCCTGATCTTCCTTTCACAAACAACTATGGTGTATGGGAGGACGAGTTCA
AAGATCTTGGTCTTCAAGCCTGCATTGAACATGTTTGGCGGGATACCATTGTATATCTTG
ATGATGATGAACCTATTCTTATTGGCCGTGCCTATGGAAGAGTTAGTCGCCATTTTCTGC
ACGAGGAGTTACTCAAAAGGTGTGTGGAGGCAGGTGTTTTGTATCTAAACTCGAAAGTGG
ATAGGATTGTTGAGGCCACAAATGGCCAGAGTCTTGTAGAGTGCGAGGGTGATGTTGTGA
TTCCCTGCAGGTTTGTGACTGTTGCATCGGGGGCAGCCTCGGGGAAATTCTTGCAGTATG
AGTTGGGAGGTCCTAGAGTTTCTGTTCAAACAGCTTATGGAGTGGAAGTTGAGGTTGATA
ACAATCCATTTGACCCGAGCCTGATGGTTTTCATGGATTATAGAGATTATGTCAGACACG
ACGCTCAATCTTTAGAAGCTAAATATCCAACATTTCTTTATGCCATGCCCATGTCTCCAA
CACGAGAAACTTGTTTGGCTTCAAAAGATGCAATGCCATTCGATCTGTTAAAGAAAAAAC
TGATGCTACGATTGAACACCCTTGGTGTAAGAATTAAAGAAATTTACGAGGAGGAATGGT
CTTACATACCGGTTGGTGGATCTTTGCCAAATACAGAACAAAAAACACTTGCATTTGGTG
CTGCTGCTAGCATGGTTCATCCAGCCACAGGTTATTCAGTCGTCAGATCACTTTCTGAAG
CTCCAAAATGCGCCTCTGTACTTGCAAATATATTACGACAACATTATAGCAAGAACATGC
TTACCAGTTCAAGTATCCCGAGTATATCAACTCAAGCTTGGAACACTCTTTGGCCACAAG
AACGAAAACGACAAAGATCGTTTTTCCTATTTGGACTGGCTCTGATATTGCAGCTGGATA
TTGAGGGGATAAGGTCATTTTTCCGCGCATTCTTCCGTGTGCCAAAATGGATGTGGCAGG
GATTTCTTGGTTCAAGTCTTTCTTCAGCAGACCTCATGTTATTTGCCTTCTACATGTTTA
TTATTGCACCAAATGACATGAGAAAAGGCTTGATCAGACATCTTTTATCTGATCCTACTG
GTGCAACATTGATAAGAACTTATCTTACATTTTAGAGTAAACTCCTCCTACAATAATTGT
TGAATCAGAGGCCTCATTACTTCAGATTCATAACAGAAATCGCGGTCTCTCGAGGCATTG
TATATAACATTTTCACTAGCTTAATATGCTTGAATAAGTTGCATAGTTTCAGTTTTTGTA
TCTGCTTCTTTTTTTGTCCTAGATCATGTATTGATCCAATCTATATACATTGCCAATATA
TATAAATTTTACAATATTGCTAGTTTTTTTTTTTTTTTTAATTTGTCATGAATTACCTAC
TTTAATTTTTTGTTTTCACTAATTATGAATTGTTTATATCTGTAATTTTCTTTTAGATAA
TTTGCTAGTGTATATAGAAGTTTATTAGTAGTGCATGACTCTGAGCTGTTCAAGTTTGAA
ACATTCTTTTGTTTATTTTAGAAAAAAGTAGTTTATTTAAACAATTTAAAAGAAGCATTT
ATCATGTCTTCTCACAAATTATATTAATTTAGCAATGTTATTTTGTATATATACAATATA
TATGATAATCTTTTCCTTCATTTTCCTTTGAGGATTATTCATTTCCTAAACCATGAGATT
GGTTTCAAAGTTAATGATGAGAAATATAAAGGGAAAGACGATATTTCACTTTTATATGCT
TAATTTGTGAGTTCATATTTTATATTTGGACAGTTGAAAATTAAAAAATTATTTTTAAGA
TCAACTCTAATTAAACTAGTAGAAAATAAAAATAAAAATCAATTTTTATTATTATTTTTA
CAAAATTTTCACGATCAATATAATTACTCTGTAGCTTGTTCTCACTCAGTATATATACAT
GAAGTGTCTAATACAAT