Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g008960.2.1
CDS Infomation

Calmodulin-binding family protein (AHRD V3.3 *** A0A061GKK0_THECC)
Sequence

ATGACTGTTCGATCGAATAGCTTTAAAGGAACACATTTGGAAACTATTATACAATCGAAT
AATGAAGTCGATAAGATGACAAGGAAGAATTCGATAAATTTAAGGAACTGTGATCCAAAG
AAACTGATGTTAGAGACCACATTATCATTCAAGAATCTGGTTCAAGACTTAGATATATCA
GAATGGAACGAAAAAAAGACGAGAGCAACAGTTTCATTACCCGAGCCTTCGATTCTGTTT
TCTCCACGACCTGTTAGTGAGCTTGATGCTGCTGCTGTTAAGCTTCAGAAAGTGTATAAG
AGTTATAGGACAAGAAGAAATCTTGCAGATTGTGCTGTTGTGGTTGAAGAACTATGGTGG
AAGGCTTTGGATTTCGCAGCTCTCAAACGGAGTTCTGTTTCGTTCTTCAACGTGGAGAAA
CCGGAAACTGCTGTATCGCGGTGGGCTAGAGCACGTACACGAGCTGCCAAAGTTGGTAAA
GGATTGTCAAAAGATGAAAAAGCTCAGAAACTTGCTCTGCAGCATTGGCTAGAAGCTATT
GATCCACGACACCGGTATGGTCACAACTTACACTTCTACTACGATATATGGTTCGAAAGT
GAAAGCTCTCAACCTTTCTTCTACTGGTTGGATGTTGGAGACGGGAAAGAGATAAATCTC
GAGAAGTGTCCTAGGTTCAATCTGCAGCATCAATGCATCAAGTATCTAGGACCTAAAGAA
CGTGAATCGTATGAAGTAGTTATTCAGGACGGGAAACTTGTCTATAAACAAAACGGTGTC
TTTGTGGAGACAGTAGAGGGTTCAAAATGGATCTTTGTTCTTAGCACAACAAGAACATTG
TACGTAGGAAAAAAGAAGAAAGGTGTGTTTCAACACTCGAGTTTCCTATCGGGTGGTGCA
ACTACTGCTGCTGGTAGACTCGTTGCTCATGGTGGCGTTTTGAAGGCTATTTGGCCATAC
AGCGGACACTATCACCCCACGGAAGAGAACTTCCGGGAATTCATTAGTTTCCTCGAGGAG
CATAGCGTAGATCTTACAAACGTCAAGAGATGTTCTGTTGACGATGATGATCATTCGTTT
AGAGTTAACAACGAGGGATCGAATCATCAATCACTCATTACTAAAGAATCACCTAAGAGA
AGTACAGAGGAAAAAACAGAGGAAAAGAGAGAGGTTAATACAACAGATGATGAACGCGAA
GACAAGAAACAAGAAGACACATCGTTTAGCTTTGCTAAACGTTTGTCTCGAAAATGGTCA
ACAGGAAACGGGCCTCGTATTGGTTGTGTTAGGGAATATCCAACGGAGTTACAGTTCCGA
GCACTTGAACAAGTTAACTTGTCACCACGAGTTGCTAACGGAGGTTTCAACATGTATGGC
CCTATCCCCTCACCAAGACCTAGCCCGAAGATTCGTCTTTCTCCTAGGATTGCATATATG
GGACTACCTAGTCCAAGGACACCTATTTCAGCAGCTAACTAA

Peptide Sequence

PEP ID

Solyc12g008960.2.1
PEP Infomation

Calmodulin-binding family protein (AHRD V3.3 *** A0A061GKK0_THECC)
Sequence

MTVRSNSFKGTHLETIIQSNNEVDKMTRKNSINLRNCDPKKLMLETTLSFKNLVQDLDIS
EWNEKKTRATVSLPEPSILFSPRPVSELDAAAVKLQKVYKSYRTRRNLADCAVVVEELWW
KALDFAALKRSSVSFFNVEKPETAVSRWARARTRAAKVGKGLSKDEKAQKLALQHWLEAI
DPRHRYGHNLHFYYDIWFESESSQPFFYWLDVGDGKEINLEKCPRFNLQHQCIKYLGPKE
RESYEVVIQDGKLVYKQNGVFVETVEGSKWIFVLSTTRTLYVGKKKKGVFQHSSFLSGGA
TTAAGRLVAHGGVLKAIWPYSGHYHPTEENFREFISFLEEHSVDLTNVKRCSVDDDDHSF
RVNNEGSNHQSLITKESPKRSTEEKTEEKREVNTTDDEREDKKQEDTSFSFAKRLSRKWS
TGNGPRIGCVREYPTELQFRALEQVNLSPRVANGGFNMYGPIPSPRPSPKIRLSPRIAYM
GLPSPRTPISAAN*

Transcript Sequence

Transcript ID

Solyc12g008960.2.1
Transcript Infomation

Calmodulin-binding family protein (AHRD V3.3 *** A0A061GKK0_THECC)
Sequence

ATAGTTAGTCATATTCATAGACATATTTGTAGTTCATTTGAAGAAAAAAAAGGGTTGGGA
TTTTATTTTCTCATCTTTACAACTTTTTGTGATATTTGAGGTTATAAGGCTTTTTTAGTA
TCTTGCTAAAAAGAACTTGGGAGATGACTGTTCGATCGAATAGCTTTAAAGGAACACATT
TGGAAACTATTATACAATCGAATAATGAAGTCGATAAGATGACAAGGAAGAATTCGATAA
ATTTAAGGAACTGTGATCCAAAGAAACTGATGTTAGAGACCACATTATCATTCAAGAATC
TGGTTCAAGACTTAGATATATCAGAATGGAACGAAAAAAAGACGAGAGCAACAGTTTCAT
TACCCGAGCCTTCGATTCTGTTTTCTCCACGACCTGTTAGTGAGCTTGATGCTGCTGCTG
TTAAGCTTCAGAAAGTGTATAAGAGTTATAGGACAAGAAGAAATCTTGCAGATTGTGCTG
TTGTGGTTGAAGAACTATGGTGGAAGGCTTTGGATTTCGCAGCTCTCAAACGGAGTTCTG
TTTCGTTCTTCAACGTGGAGAAACCGGAAACTGCTGTATCGCGGTGGGCTAGAGCACGTA
CACGAGCTGCCAAAGTTGGTAAAGGATTGTCAAAAGATGAAAAAGCTCAGAAACTTGCTC
TGCAGCATTGGCTAGAAGCTATTGATCCACGACACCGGTATGGTCACAACTTACACTTCT
ACTACGATATATGGTTCGAAAGTGAAAGCTCTCAACCTTTCTTCTACTGGTTGGATGTTG
GAGACGGGAAAGAGATAAATCTCGAGAAGTGTCCTAGGTTCAATCTGCAGCATCAATGCA
TCAAGTATCTAGGACCTAAAGAACGTGAATCGTATGAAGTAGTTATTCAGGACGGGAAAC
TTGTCTATAAACAAAACGGTGTCTTTGTGGAGACAGTAGAGGGTTCAAAATGGATCTTTG
TTCTTAGCACAACAAGAACATTGTACGTAGGAAAAAAGAAGAAAGGTGTGTTTCAACACT
CGAGTTTCCTATCGGGTGGTGCAACTACTGCTGCTGGTAGACTCGTTGCTCATGGTGGCG
TTTTGAAGGCTATTTGGCCATACAGCGGACACTATCACCCCACGGAAGAGAACTTCCGGG
AATTCATTAGTTTCCTCGAGGAGCATAGCGTAGATCTTACAAACGTCAAGAGATGTTCTG
TTGACGATGATGATCATTCGTTTAGAGTTAACAACGAGGGATCGAATCATCAATCACTCA
TTACTAAAGAATCACCTAAGAGAAGTACAGAGGAAAAAACAGAGGAAAAGAGAGAGGTTA
ATACAACAGATGATGAACGCGAAGACAAGAAACAAGAAGACACATCGTTTAGCTTTGCTA
AACGTTTGTCTCGAAAATGGTCAACAGGAAACGGGCCTCGTATTGGTTGTGTTAGGGAAT
ATCCAACGGAGTTACAGTTCCGAGCACTTGAACAAGTTAACTTGTCACCACGAGTTGCTA
ACGGAGGTTTCAACATGTATGGCCCTATCCCCTCACCAAGACCTAGCCCGAAGATTCGTC
TTTCTCCTAGGATTGCATATATGGGACTACCTAGTCCAAGGACACCTATTTCAGCAGCTA
ACTAAAGCAACATTTTACATTTGCACCAGCTGATGATGGATGTCTCGAAAACAGGTTTTA
GTATCCGACCCATTTCTTTTGCTTGATCAGGACCACGAGTCATGTTCACTTGTTCGTTTA
TAGTATCCTGACCTCTGACTAAAGATGGAGAAGTAGATGCAACAAACTAACTAAAATCGT
TATTTATTCGTTCATTCATGTTTGATTTATTTGTACAAGATGGCTTCATTTAGCCTAATT
AATCATCTTTTATCAAAGTTTTCAATGATGGCTTTGATTAACATTTTTGTACAATTTTTT
TCATATTTTTTAGCATCAATGAATTGAAGTTGAAATGATAGCTCTTTACATATATATACC
AAAGTTTCTATGTCCAATCTTGTAATTTAAAT