Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g008940.2.1
CDS Infomation

Nucleosome assembly protein 1-1 (AHRD V3.3 *** NAP1A_TOBAC)
Sequence

ATGAGCAACCCTAAAGATAACTTCAATGTTGCCGATCTCAGTGCTGCTCTGAATGCTGGG
GACAGAGCAGACCTTGTTAATGTTCTCAAAAACAAACTTCAAGACCTTACTGGGAAGCAC
ACAAACTTGCTTGAAAATCTCTCGCCCAATGTCAGAAAGCGTGTTGAAGTTCTGAGAGAG
ATTCAGTCTCAGCATGATGAGTTGGAGGCAAAATTTTTTGAAGAGAGAGCTGCACTTGAA
GCCAAATACCAAAAGTTGTATCAGCCTCTATATACTAAGAGGTTTGATATTGTGAATGGA
GTTGTTGAAGTTGATGGTGCAGTGACAGAGGCAGCAGCAGACCAGGAAGAGGATAAAGAT
GCAGAGGGGAAAGGAGTCCCAGATTTCTGGTTCACTGCAATGAAGAATAATGAAGTGCTA
GCTGAGGAGATTTCCGAGCGAGATGAAGGCGCCCTCAAATTTCTCAAGGATATAAAGTGG
ACAAGGATTGAGAATCCCAAGGGATTTAAACTTGAATTTTTCTTTGACACCAATCCGTAC
TTCAAGAATACTGTGCTGACTAAAACATATCACATGATTGATGAAGATGAACCAATTCTG
GAGAAGGCCATAGGGACCGAGATAGAATGGTATCCAGGAAAATGTTTGACACAAAAGATT
CTCAAGAAGAAGCCAAAGAAGGGCTCAAAGAATGCTAAACCTATTATGAAAACAGAACAA
TGCGAAAGTTTCTTCAACTTCTTTAGTCCACCTCAAGTTCCAGAAGACGAAGAGGATATC
GATGAAGATGCTGCTGAAGAACTTCAAGGTTTGATGGAACAAGACTATGATATTGGATCA
ACTATCCGAGATAAGATTATTCCTCATGCAGTTTCTTGGTTCACTGGGGAAGCTGCCGAA
GATGATTTTGCTGACTTGGAAGATGAGGATGATGAAGATGATGACGAAGTGGATGATGAA
GAGGACGAGGACGAGGATGATGATGAAGATGATGAGGATGATGAGGATGAAGATGATAGC
AGTACCAAGAAAAAGTCATCATCTGCTGCTCGCAAGAAGATTGGTAGGGCACATGCAGCA
GATGGTCCGGCTGGTGAGAGGCCACCGGAGTGCAAGCAACAGTAG

Peptide Sequence

PEP ID

Solyc12g008940.2.1
PEP Infomation

Nucleosome assembly protein 1-1 (AHRD V3.3 *** NAP1A_TOBAC)
Sequence

MSNPKDNFNVADLSAALNAGDRADLVNVLKNKLQDLTGKHTNLLENLSPNVRKRVEVLRE
IQSQHDELEAKFFEERAALEAKYQKLYQPLYTKRFDIVNGVVEVDGAVTEAAADQEEDKD
AEGKGVPDFWFTAMKNNEVLAEEISERDEGALKFLKDIKWTRIENPKGFKLEFFFDTNPY
FKNTVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKILKKKPKKGSKNAKPIMKTEQ
CESFFNFFSPPQVPEDEEDIDEDAAEELQGLMEQDYDIGSTIRDKIIPHAVSWFTGEAAE
DDFADLEDEDDEDDDEVDDEEDEDEDDDEDDEDDEDEDDSSTKKKSSSAARKKIGRAHAA
DGPAGERPPECKQQ*

Transcript Sequence

Transcript ID

Solyc12g008940.2.1
Transcript Infomation

Nucleosome assembly protein 1-1 (AHRD V3.3 *** NAP1A_TOBAC)
Sequence

CAACTTAATTTTTCACACGCATTTCAAAATTCCCCCTCCCCCCCCCAATTTCCCTACCCC
ACTTACAACCGGGCATGATCTCCTTTGAATCCAAACACGGTCTTGCTGACAGTCAGATAC
AGCTGCTGCTAGGTTTTCTCTTTTTTTAGAGAGAGAAAGTGAAAAAGGGGGGAATTTTGA
TAGCTTAAATACACCCATTTTCTCTCTCTCTTCCCTTATTGTTCATCCTCTGTTTTAGGT
TTTTATTTTTAGGGCATTTTTATCTTCCAATTTTCTCTTGGTATAATGAGCAACCCTAAA
GATAACTTCAATGTTGCCGATCTCAGTGCTGCTCTGAATGCTGGGGACAGAGCAGACCTT
GTTAATGTTCTCAAAAACAAACTTCAAGACCTTACTGGGAAGCACACAAACTTGCTTGAA
AATCTCTCGCCCAATGTCAGAAAGCGTGTTGAAGTTCTGAGAGAGATTCAGTCTCAGCAT
GATGAGTTGGAGGCAAAATTTTTTGAAGAGAGAGCTGCACTTGAAGCCAAATACCAAAAG
TTGTATCAGCCTCTATATACTAAGAGGTTTGATATTGTGAATGGAGTTGTTGAAGTTGAT
GGTGCAGTGACAGAGGCAGCAGCAGACCAGGAAGAGGATAAAGATGCAGAGGGGAAAGGA
GTCCCAGATTTCTGGTTCACTGCAATGAAGAATAATGAAGTGCTAGCTGAGGAGATTTCC
GAGCGAGATGAAGGCGCCCTCAAATTTCTCAAGGATATAAAGTGGACAAGGATTGAGAAT
CCCAAGGGATTTAAACTTGAATTTTTCTTTGACACCAATCCGTACTTCAAGAATACTGTG
CTGACTAAAACATATCACATGATTGATGAAGATGAACCAATTCTGGAGAAGGCCATAGGG
ACCGAGATAGAATGGTATCCAGGAAAATGTTTGACACAAAAGATTCTCAAGAAGAAGCCA
AAGAAGGGCTCAAAGAATGCTAAACCTATTATGAAAACAGAACAATGCGAAAGTTTCTTC
AACTTCTTTAGTCCACCTCAAGTTCCAGAAGACGAAGAGGATATCGATGAAGATGCTGCT
GAAGAACTTCAAGGTTTGATGGAACAAGACTATGATATTGGATCAACTATCCGAGATAAG
ATTATTCCTCATGCAGTTTCTTGGTTCACTGGGGAAGCTGCCGAAGATGATTTTGCTGAC
TTGGAAGATGAGGATGATGAAGATGATGACGAAGTGGATGATGAAGAGGACGAGGACGAG
GATGATGATGAAGATGATGAGGATGATGAGGATGAAGATGATAGCAGTACCAAGAAAAAG
TCATCATCTGCTGCTCGCAAGAAGATTGGTAGGGCACATGCAGCAGATGGTCCGGCTGGT
GAGAGGCCACCGGAGTGCAAGCAACAGTAGTCATTCGTTTCGAGCTGGCTTCATGATATT
TGTCTTGAAAATATGGATGACAGAGGAGATCCTGCAATTTTGTTTGCTTGTTGTTCGTCG
AGTATGCTAGAACAATCTTTTTAGTCATTTTGCATTATATATGTTTTCTGGTTTACATTC
TTTGCCTTTTGCAGTTTGCCCTTTTATATTCCTGGTGTAGTAGTAGTAGTAGTAGATAGG
ATTTGGAAGTGTGATGAGACTTGTTTGTACTCTTATTGAATTGGTTGGAGATTCAAAAAT
CTCAAATATAGCTTTAGTTGCAAGATATTTTTCTCCTTCCTGTGTTTCATAAGGTGTTTG
TAAGGTTGACTCTAAAAACTAAAACTTTTTAGAGCTCGTTTCCACTTGTTGTATTACATG
GGGTATGCGGAGATTGTCCTAAGCTTCTTGAATCGTATTGAAAACTTCTTTACACAAGGT
ATGAAGTTAAATTGACTTTACACACTATATCCTTCTCAGATCCCGATCTCATTCGTGAGA
TTCAATAGGGTATACGG