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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g008630.2.1
CDS Infomation

Mitochondrial-processing peptidase subunit alpha (AHRD V3.3 *** MPPA_SOLTU)
Sequence

ATGTACAGATGCGTATCGTCTCGTCTCAGCTCTCTTAAGGCACGTCAAGGCAACAGGGTC
TTGACAAGATTTTCAAGTTCAGCTGCTGTTGCAACCAAGCCATCTGGGGGTCTTTTTAGT
TGGATAACTGGTGATACGTCAAGTTCAGTGACTCCCTTGGACTTTCCCCTCAATGATGTT
AAACTCTCGCCACCATTACCTGATTATGTAGAACCTGCAAAGACTCGGATAACGACTCTC
GCTAATGGTGTCAAAGTGGCCTCTGAAGCATCGGTGAATCCTGCTGCCTCAATTGGCCTC
TATGTTGACTGTGGCTCTATTTACGAGACACCAGTTTCATATGGAGCCACCCACCTCTTG
GAACGCATGGCCTTCAAAAGCACGTTAAACCGGAGTCACTTGCGTATTGTACGAGAAATT
GAAGCAATTGGTGGTAATGTAACAGCTTCAGCCTCACGAGAGCATATGATCTACACTTAC
GATGCTTTGAAAACTTATGTACCACAAATGGTGGAGATGCTTGTTGACTGTGTTAGAAAT
CCTGCATTCCTGGATTGGGAAGTTAAAGAGCAGCTTGAGAAGGTTAAAGCTGAGATTAGC
GAGTACTCCAAAAACCCTCAACACTTGCTTTTGGAGGCAGTTCATTCTGCTGGTTATGCT
GGTCCATATGGGAATTCTCTGATGGCCACAGAAGCTACAATAAACAGGTTAAACAGCACA
GTGCTGGAGGAGTTTGTAGCTGCGAATTATACTGCTCCTCGGATGGTTCTTGCTGCATCT
GGTGTTGAACATGAAGAATTCTTAAAAGTTGCAGAACCTCTTCTGTCTGATTTACCTAAG
GTGTCTGCCACTGAGGAGCCTAAACCTGTGTATGTGGGAGGAGATTACCGCTGTCAAGCC
GATGCAGAGATGACTCATTTTGCCCTTGCCTTTGAAGTTCCCGGTGGCTGGATGTCTGAA
AAAGAATCAATGACTTTAACAGTTCTTCAGATGCTTATGGGAGGAGGTGGATCTTTCTCA
GCTGGCGGTCCTGGAAAAGGGATGTACTCGAGATTATATCTTCGTGTCTTAAATCAGTAC
CCGCAGATTCACGCATTCTCTGCATTCAGCAGCATTTACAATAACACTGGATTATTTGGA
ATTCAAGGAACTACGGGCTCTGATTTTGGGCCTCAAGCTGTTGATGTAGCAGTTAAAGAG
CTTATCGCGGTAGCAAACCCTAGTGAAGTCGACCAAGTACAGCTAAACCGTGCTAAACAG
GCAACAAAGTCTGCCATTCTGATGAACTTGGAATCCCGGATGGTTGCATCAGAAGATATC
GGCAGACAACTTTTGACATATGGAGAGAGGAAACCAGTGGAGCATTTCTTGAAAGCCATT
GATGCAGTTTCAGCAAAAGATATTGCTTCCGTTGTGCAGAAGCTTATTTCTTCTCCTCTG
ACCATGGCATCCTACGGAGATGTTCTCTCCCTCCCATCATACGATGCAGTCAGCAGCAGG
TTCCGTTCCAAATAA

Peptide Sequence

PEP ID

Solyc12g008630.2.1
PEP Infomation

Mitochondrial-processing peptidase subunit alpha (AHRD V3.3 *** MPPA_SOLTU)
Sequence

MYRCVSSRLSSLKARQGNRVLTRFSSSAAVATKPSGGLFSWITGDTSSSVTPLDFPLNDV
KLSPPLPDYVEPAKTRITTLANGVKVASEASVNPAASIGLYVDCGSIYETPVSYGATHLL
ERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLVDCVRN
PAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINRLNST
VLEEFVAANYTAPRMVLAASGVEHEEFLKVAEPLLSDLPKVSATEEPKPVYVGGDYRCQA
DAEMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLNQY
PQIHAFSAFSSIYNNTGLFGIQGTTGSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQ
ATKSAILMNLESRMVASEDIGRQLLTYGERKPVEHFLKAIDAVSAKDIASVVQKLISSPL
TMASYGDVLSLPSYDAVSSRFRSK*

Transcript Sequence

Transcript ID

Solyc12g008630.2.1
Transcript Infomation

Mitochondrial-processing peptidase subunit alpha (AHRD V3.3 *** MPPA_SOLTU)
Sequence

ATCCCTAAGCCCAATGGGCTTTTTACATTCTCACCAAAAGCCCATCAAAGAAAGTTTCTC
ATCTTCTCCAAATTCCAATACACCCAAATATTTGCTATTCTTCTTCTCCGCAGCTTCATT
TTTTCACTGAAAAGAATTTCTACAAAATCGCATTTCTCATCTTCCCGGAGCTCTACTCAG
TTCTCCGATCATCACCGTCAAAATGTACAGATGCGTATCGTCTCGTCTCAGCTCTCTTAA
GGCACGTCAAGGCAACAGGGTCTTGACAAGATTTTCAAGTTCAGCTGCTGTTGCAACCAA
GCCATCTGGGGGTCTTTTTAGTTGGATAACTGGTGATACGTCAAGTTCAGTGACTCCCTT
GGACTTTCCCCTCAATGATGTTAAACTCTCGCCACCATTACCTGATTATGTAGAACCTGC
AAAGACTCGGATAACGACTCTCGCTAATGGTGTCAAAGTGGCCTCTGAAGCATCGGTGAA
TCCTGCTGCCTCAATTGGCCTCTATGTTGACTGTGGCTCTATTTACGAGACACCAGTTTC
ATATGGAGCCACCCACCTCTTGGAACGCATGGCCTTCAAAAGCACGTTAAACCGGAGTCA
CTTGCGTATTGTACGAGAAATTGAAGCAATTGGTGGTAATGTAACAGCTTCAGCCTCACG
AGAGCATATGATCTACACTTACGATGCTTTGAAAACTTATGTACCACAAATGGTGGAGAT
GCTTGTTGACTGTGTTAGAAATCCTGCATTCCTGGATTGGGAAGTTAAAGAGCAGCTTGA
GAAGGTTAAAGCTGAGATTAGCGAGTACTCCAAAAACCCTCAACACTTGCTTTTGGAGGC
AGTTCATTCTGCTGGTTATGCTGGTCCATATGGGAATTCTCTGATGGCCACAGAAGCTAC
AATAAACAGGTTAAACAGCACAGTGCTGGAGGAGTTTGTAGCTGCGAATTATACTGCTCC
TCGGATGGTTCTTGCTGCATCTGGTGTTGAACATGAAGAATTCTTAAAAGTTGCAGAACC
TCTTCTGTCTGATTTACCTAAGGTGTCTGCCACTGAGGAGCCTAAACCTGTGTATGTGGG
AGGAGATTACCGCTGTCAAGCCGATGCAGAGATGACTCATTTTGCCCTTGCCTTTGAAGT
TCCCGGTGGCTGGATGTCTGAAAAAGAATCAATGACTTTAACAGTTCTTCAGATGCTTAT
GGGAGGAGGTGGATCTTTCTCAGCTGGCGGTCCTGGAAAAGGGATGTACTCGAGATTATA
TCTTCGTGTCTTAAATCAGTACCCGCAGATTCACGCATTCTCTGCATTCAGCAGCATTTA
CAATAACACTGGATTATTTGGAATTCAAGGAACTACGGGCTCTGATTTTGGGCCTCAAGC
TGTTGATGTAGCAGTTAAAGAGCTTATCGCGGTAGCAAACCCTAGTGAAGTCGACCAAGT
ACAGCTAAACCGTGCTAAACAGGCAACAAAGTCTGCCATTCTGATGAACTTGGAATCCCG
GATGGTTGCATCAGAAGATATCGGCAGACAACTTTTGACATATGGAGAGAGGAAACCAGT
GGAGCATTTCTTGAAAGCCATTGATGCAGTTTCAGCAAAAGATATTGCTTCCGTTGTGCA
GAAGCTTATTTCTTCTCCTCTGACCATGGCATCCTACGGAGATGTTCTCTCCCTCCCATC
ATACGATGCAGTCAGCAGCAGGTTCCGTTCCAAATAAATCCATTGTCAACCACGAAGTAC
ACAGCAAGACTATCATGCTGTTATTTTTTAGGTTTTTAGAAAATCTTTACGCGTGTGGCT
ATAATTTGCTGAAAATAAAGAGGGGTTACGAGCTATCGATAATTCAGCTTTGTCAAAGCT
TTAAGATAAGGAGCATCATCATCTGGTCTGGGCACATGGTTTTTGTGTATACAGTTTGTA
ATTCATTCAGCTTTCTTTGATATTTTGATGACATAATGTCATAGGGCATTACTCCTCTAG
TTAACAATTTTGAGAATTCCTCTTCACCCAAAATGGGAAGAAATACTAATTTTATCTCAA
TATTGTGAATCCAATGAATTTTATACCAAGGTTGATCGATATTAATTAGCCTTGGGAGTT
GGTATGAATAAAAACAATATACTCAGTATCGAGTGTAAGCATGCTTTTACCTTTCTCTTA
TTTGAGGTAGAGAAGTCATTTCTTATATATCCTCGTCTCAAAAAGTTGACCTTTGACCTT
CATTGCGTGTCATGTTTATATGTTATGTTTAGTCTAATTAATTAATCTTAATTTTTCTTC
GGTCTATTTCTATCTCTACTTATAGGCTAAAGCTAACACTGATGCATCT