Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g008490.2.1
CDS Infomation

Nucleotide-diphospho-sugar transferase domain protein (AHRD V3.3 *** G7L7F4_MEDTR)
Sequence

ATGGTGACGGTTGATACATTTGATGAGTATTTGTTTAATGCTAGCAGAGCATTGTGTAGT
CCTATTGCAGTTTTCATTCAGATCCAGGGATGTTTAATCGTCTTAATCCTGGCTCTTGGA
TGGGCTTTAGCTGCTTATGTTAGGGGCAGGGAGATCCGACGGATGAAGAGTAGTATGAAA
CGTGGAAATAGTTTTGCATTCCTTACATTGGACATTAATGAACTTGAGCATTCAAAACAG
GTCAATTTGCCTCGAGTCACAGTTGTAATGCCTTTAAAAGGGTTTGGCGAGCACAATCTA
CACAACTGGAGAAGTCAGATCACGTCTCTTTATGGTGGTCCTTTGGAGTTCCTTTTTGTG
GTTGAAAGTACTGCTGATCCTGCTTATCATGCTGTGAAGTGTTTATTAGCGGATTTTAAG
GATGCTGTTGAGGCTAAGGTTATTGTAGCTGGTCTGTCAACAACTTGTAGTCAGAAGATT
CACAATCAATTGGTTGGGGTGGAACAAATGCACAAAGATACGAAGTATGTTTTATTCCTT
GACGACGATGTTAGGTTGCACCCTGGGTCAATTGGGGCCCTTACTACTGAAATGGAGAAG
AATCCAGAGATCTTTATTCAAACAGGATATCCTCTTGATTTACCATCTGGAACTTTGGGA
AGTTACTGCATTTATGGATACCACATGCCATGTTCAATGGGATTTGCTACTGGTGGAAAA
ACATTCTTTCTGTGGGGAGGATGCATGATGATGCATGCAAACGATTTTAGAACCGACCGC
CATTGTGTAGTGTCAGGGCTTCGAGATGGGGGCTACTCAGATGACATGACTCTAGCAGCT
ATAGCAGGTGCACACAAGAGGCTTATTACATCACCACCGGTTGCAGTCTTTCCACATCCT
CTTGCAACTGATCTTACCTTCCCTAGATATTGGAATTATTTGAGGAAGCAAACATTTGTA
CTCGAATCATATACAACAAAGGTGAACTGGATCATGAATCGGGCTTTATTTACATCCCAC
TGCTATCTGTCTTGGGGTTTTGTATCTCCATACATCATGGCGGGGATTCATGTAGCAGCA
GCACTGAGGCATTACCTTAAAGAAAACTCTCTTGAGGGTACAGCCATGACATGTAATGGG
TTGTTACTTGTTGCATGCCTTGCTGTATGCACAGTGATTGAACTCCTTTCCATATGGAAC
TTGACAAGAATCGAAGTTCACTTGTGCAATATGTTGTCTCCCGAGGCACCTCAACTGTCA
CTCGCTTCTTATAACTGGTGTCTTGTATTCATTGCAATGCTGGTTGACAACTTTTTATAC
CCACTATCTGCTATGCGTTCTCATCTTTCTCAGTCCATCAACTGGTCTGGCATCCGATAT
CATTTGAAAGATGGGAAGATATGCAAGATCGACAGACACAAACACCTGGTTCCTAAAATT
ACAGATTTGGCAGGAAAAGATTTGCTTGGAAAACAAGGATCAATACCTAAGGTTGCTATT
ATTAGTACATTGTCCAGAACTTTAGCTCAATGGAGACAACCAAAGAAATATAACATTTAG

Peptide Sequence

PEP ID

Solyc12g008490.2.1
PEP Infomation

Nucleotide-diphospho-sugar transferase domain protein (AHRD V3.3 *** G7L7F4_MEDTR)
Sequence

MVTVDTFDEYLFNASRALCSPIAVFIQIQGCLIVLILALGWALAAYVRGREIRRMKSSMK
RGNSFAFLTLDINELEHSKQVNLPRVTVVMPLKGFGEHNLHNWRSQITSLYGGPLEFLFV
VESTADPAYHAVKCLLADFKDAVEAKVIVAGLSTTCSQKIHNQLVGVEQMHKDTKYVLFL
DDDVRLHPGSIGALTTEMEKNPEIFIQTGYPLDLPSGTLGSYCIYGYHMPCSMGFATGGK
TFFLWGGCMMMHANDFRTDRHCVVSGLRDGGYSDDMTLAAIAGAHKRLITSPPVAVFPHP
LATDLTFPRYWNYLRKQTFVLESYTTKVNWIMNRALFTSHCYLSWGFVSPYIMAGIHVAA
ALRHYLKENSLEGTAMTCNGLLLVACLAVCTVIELLSIWNLTRIEVHLCNMLSPEAPQLS
LASYNWCLVFIAMLVDNFLYPLSAMRSHLSQSINWSGIRYHLKDGKICKIDRHKHLVPKI
TDLAGKDLLGKQGSIPKVAIISTLSRTLAQWRQPKKYNI*

Transcript Sequence

Transcript ID

Solyc12g008490.2.1
Transcript Infomation

Nucleotide-diphospho-sugar transferase domain protein (AHRD V3.3 *** G7L7F4_MEDTR)
Sequence

TTCTTTCTCTAAATTACACCAAAATCCATTTTCCCCCTTTCGAAATATAAAATTACGCGG
TCTCTCACAAGTTTTTCCTTTTTTTCCTCCATTCATTTCTTCTCTCTCAGTGTTTCTCTC
TCTTCTTCTCCTTCCATGGTGATTGATCTGAGAGAAACGCTGAATATAACTCTGCAGAAT
TTCTCTCTCTCTTCTCTCTCTCAGATCTAGGGCATTGTTTTGATTGCCCTAGCACATTTG
AGTTATCTCTCGCCTCGCAACAGACAGGGAGATTGGAGATATACATATATATATCTTCGT
AAAAAAAATTGAAAAAAAAAAGTGAAAAAAATGGTGACGGTTGATACATTTGATGAGTAT
TTGTTTAATGCTAGCAGAGCATTGTGTAGTCCTATTGCAGTTTTCATTCAGATCCAGGGA
TGTTTAATCGTCTTAATCCTGGCTCTTGGATGGGCTTTAGCTGCTTATGTTAGGGGCAGG
GAGATCCGACGGATGAAGAGTAGTATGAAACGTGGAAATAGTTTTGCATTCCTTACATTG
GACATTAATGAACTTGAGCATTCAAAACAGGTCAATTTGCCTCGAGTCACAGTTGTAATG
CCTTTAAAAGGGTTTGGCGAGCACAATCTACACAACTGGAGAAGTCAGATCACGTCTCTT
TATGGTGGTCCTTTGGAGTTCCTTTTTGTGGTTGAAAGTACTGCTGATCCTGCTTATCAT
GCTGTGAAGTGTTTATTAGCGGATTTTAAGGATGCTGTTGAGGCTAAGGTTATTGTAGCT
GGTCTGTCAACAACTTGTAGTCAGAAGATTCACAATCAATTGGTTGGGGTGGAACAAATG
CACAAAGATACGAAGTATGTTTTATTCCTTGACGACGATGTTAGGTTGCACCCTGGGTCA
ATTGGGGCCCTTACTACTGAAATGGAGAAGAATCCAGAGATCTTTATTCAAACAGGATAT
CCTCTTGATTTACCATCTGGAACTTTGGGAAGTTACTGCATTTATGGATACCACATGCCA
TGTTCAATGGGATTTGCTACTGGTGGAAAAACATTCTTTCTGTGGGGAGGATGCATGATG
ATGCATGCAAACGATTTTAGAACCGACCGCCATTGTGTAGTGTCAGGGCTTCGAGATGGG
GGCTACTCAGATGACATGACTCTAGCAGCTATAGCAGGTGCACACAAGAGGCTTATTACA
TCACCACCGGTTGCAGTCTTTCCACATCCTCTTGCAACTGATCTTACCTTCCCTAGATAT
TGGAATTATTTGAGGAAGCAAACATTTGTACTCGAATCATATACAACAAAGGTGAACTGG
ATCATGAATCGGGCTTTATTTACATCCCACTGCTATCTGTCTTGGGGTTTTGTATCTCCA
TACATCATGGCGGGGATTCATGTAGCAGCAGCACTGAGGCATTACCTTAAAGAAAACTCT
CTTGAGGGTACAGCCATGACATGTAATGGGTTGTTACTTGTTGCATGCCTTGCTGTATGC
ACAGTGATTGAACTCCTTTCCATATGGAACTTGACAAGAATCGAAGTTCACTTGTGCAAT
ATGTTGTCTCCCGAGGCACCTCAACTGTCACTCGCTTCTTATAACTGGTGTCTTGTATTC
ATTGCAATGCTGGTTGACAACTTTTTATACCCACTATCTGCTATGCGTTCTCATCTTTCT
CAGTCCATCAACTGGTCTGGCATCCGATATCATTTGAAAGATGGGAAGATATGCAAGATC
GACAGACACAAACACCTGGTTCCTAAAATTACAGATTTGGCAGGAAAAGATTTGCTTGGA
AAACAAGGATCAATACCTAAGGTTGCTATTATTAGTACATTGTCCAGAACTTTAGCTCAA
TGGAGACAACCAAAGAAATATAACATTTAGATAATATATCCAATCAATGATAAATTATGT
GATTCTTTTGTTCCCTTGGTATTAGTGACCAAGCATTTGCTTGACCAATTTTTTTTTTTT
TAATCCCTTGTGATCTTAAGGGGTACATCATTGATGTAGGTTGTAAGTTGTAAGGGTTAT
TGTTTCTGGCTATTAAATTTATCACTTCATTCTTGTCACTAAGGTCTACCATGCTTTTGA
GCTGGTTTTTGTAATTGTAATGTTCATTTTGTAAAAATTTAATGTCCATTTCAAAGTTAG
TTTAAGATTGTATTTTGGATGGTGGCTGACCAATAGATAACAAATGTAAGTTTATGTTGT
TTCTCAGTATTTAATTTTCACTTCATTCTTC