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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g007260.2.1
CDS Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DBR3_SOLLC)
Sequence

ATGGCAAAACTCATAGATTTTAATTCTTTGGTTTTGATGATTATTGCAATAATTGCATTA
TTTCATTCATATGTAGTCATTGGGATGACATCAAGTAGCATGTATGTTAATTGGGGTGCT
CATCATTGTAAACTTCTAGGGGATGATCTTCAACTTGTTCTTGATAAATCTGCAGGCTCT
GGTGCTCAATCAAAAAGATCATTTCTTTTTGGTAGCTTTGAAATGCTTATCAAGTTAGTA
CCCAATAATTCTGCTGGAACTGTCACAACATACTATCTATCTTCTACTGGTACCAAGCAT
GATGAAATCGATTTCGAGTTTTTAGGAAATATATCAGGACAACCTTATATTATACACACA
AATATTTACACCCAAGGTGTTGGAAATAGAGAGCAACAATTTTACCCTTGGTTTGATCCA
ACTGCTGATTTTCACAACTATACTATTCATTGGAACCCTAACGCCGTTGTATGGTACATT
GATAGTATTCCAATTAGGGTTTTTAGAAACTACCAATCCAAAGGCATTCCATTCCCAAAC
AAACAAGGAATGAGAGTCTACACTAGTCTATGGAATGCAGATGATTGGGCAACAAGAGGT
GGTCTTGTTAAAATTGATTGGACAAATGCACCATTTATTGCAACTTATAGAAAATTTAGA
CCAAGAGCTTGTTATTGGAATGGACCAATGAGTATTTCCCAATGTTCAATTCCTACAAAA
ACCAATTGGTGGAGTTCACCTACATACAATAAATTGAGTGCAAATAAACTTGGTCAAATG
AACTCAATGAGGAGTAAGTATATGATCTATGATTATTGCAAAGATGTGAAAAGATTCAAA
GGAGTTATACCTATTGAGTGCTCATTGCCACAATACTAG

Peptide Sequence

PEP ID

Solyc12g007260.2.1
PEP Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DBR3_SOLLC)
Sequence

MAKLIDFNSLVLMIIAIIALFHSYVVIGMTSSSMYVNWGAHHCKLLGDDLQLVLDKSAGS
GAQSKRSFLFGSFEMLIKLVPNNSAGTVTTYYLSSTGTKHDEIDFEFLGNISGQPYIIHT
NIYTQGVGNREQQFYPWFDPTADFHNYTIHWNPNAVVWYIDSIPIRVFRNYQSKGIPFPN
KQGMRVYTSLWNADDWATRGGLVKIDWTNAPFIATYRKFRPRACYWNGPMSISQCSIPTK
TNWWSSPTYNKLSANKLGQMNSMRSKYMIYDYCKDVKRFKGVIPIECSLPQY*

Transcript Sequence

Transcript ID

Solyc12g007260.2.1
Transcript Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DBR3_SOLLC)
Sequence

GTACAAATCACAAAAAATAATTTTAAAGATGGCAAAACTCATAGATTTTAATTCTTTGGT
TTTGATGATTATTGCAATAATTGCATTATTTCATTCATATGTAGTCATTGGGATGACATC
AAGTAGCATGTATGTTAATTGGGGTGCTCATCATTGTAAACTTCTAGGGGATGATCTTCA
ACTTGTTCTTGATAAATCTGCAGGCTCTGGTGCTCAATCAAAAAGATCATTTCTTTTTGG
TAGCTTTGAAATGCTTATCAAGTTAGTACCCAATAATTCTGCTGGAACTGTCACAACATA
CTATCTATCTTCTACTGGTACCAAGCATGATGAAATCGATTTCGAGTTTTTAGGAAATAT
ATCAGGACAACCTTATATTATACACACAAATATTTACACCCAAGGTGTTGGAAATAGAGA
GCAACAATTTTACCCTTGGTTTGATCCAACTGCTGATTTTCACAACTATACTATTCATTG
GAACCCTAACGCCGTTGTATGGTACATTGATAGTATTCCAATTAGGGTTTTTAGAAACTA
CCAATCCAAAGGCATTCCATTCCCAAACAAACAAGGAATGAGAGTCTACACTAGTCTATG
GAATGCAGATGATTGGGCAACAAGAGGTGGTCTTGTTAAAATTGATTGGACAAATGCACC
ATTTATTGCAACTTATAGAAAATTTAGACCAAGAGCTTGTTATTGGAATGGACCAATGAG
TATTTCCCAATGTTCAATTCCTACAAAAACCAATTGGTGGAGTTCACCTACATACAATAA
ATTGAGTGCAAATAAACTTGGTCAAATGAACTCAATGAGGAGTAAGTATATGATCTATGA
TTATTGCAAAGATGTGAAAAGATTCAAAGGAGTTATACCTATTGAGTGCTCATTGCCACA
ATACTAGAAGGACACAAACAAATCGGAGTGACTTCACTATCTGAAGAAGAAAGAAAATTG
TTTTAACCCTGTCGAAACAGCAATGGAAGTTATATTTCTTAA