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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g007250.1.1
CDS Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DBR2_SOLLC)
Sequence

ATGGCAAAAATCATACATTTTAATTCCTTGGTTTTGATGATTATTGCAACAATCACATTT
CAATCATATTTAGCCAATGGATGGACATCAAGTAGCATGTATGTCAATTGGGGTGCTCAT
CATTGTAAACTTTTAGGGGATGATCTTCAACTTGTTCTTGATAAATCTGCAGGCTCTGGT
GCTCAATCGAAAAATTCATTTCTCTTTGGTAGCTTTGAAATGCTTCTCAAGTTGGTACCT
AACAACTCTGCTGGAACTGTCACAACATATTATTTATCTTCTACCGGTACCAAGCATGAT
GAAATCGATTTCGAGTTTCTAGGAAATATATCAGGACATCCTTATATTATACACACAAAT
ATTTACACCCAAGGTGTTGGAAATAGAGAGCAACAATTCTATCCATGGTTTGATCCAACT
GCTGCTTTTCACAATTACACCATTCATTGGAACCCTAACGCCGTTGTATGGTACATTGAT
AGTATTCCAATTAGGGTTTTTAGAAACTACCAATCCAAAGGCATTTCATTCCCAAACCAA
CAAGGGATGGGAGTCTACACTAGTCTATGGAATGCTGATGATTGGGCAACAAGAGGTGGT
CTTGTTAAAATTGATTGGACAAATGCACCATTTATTGCAACTTATAGAAATTTTAGACCA
AGAGCTTGCTATTGGAATGGACCAATGAGTATTTCCCAATGTGCAATTCCAACAAATTCC
AATTGGTGGGCTTCACCTTCATACTATAAATTGAGTGCAAATAAAGTTGGTGAAATGATC
TCAATTAGAAGCAAGAATATGATTTATGATTATTGCAAAGATGTGAAAAGATTCAAGGGA
GTTATGCCTATTGAGTGCTCATTGCCCCAATACTAA

Peptide Sequence

PEP ID

Solyc12g007250.1.1
PEP Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DBR2_SOLLC)
Sequence

MAKIIHFNSLVLMIIATITFQSYLANGWTSSSMYVNWGAHHCKLLGDDLQLVLDKSAGSG
AQSKNSFLFGSFEMLLKLVPNNSAGTVTTYYLSSTGTKHDEIDFEFLGNISGHPYIIHTN
IYTQGVGNREQQFYPWFDPTAAFHNYTIHWNPNAVVWYIDSIPIRVFRNYQSKGISFPNQ
QGMGVYTSLWNADDWATRGGLVKIDWTNAPFIATYRNFRPRACYWNGPMSISQCAIPTNS
NWWASPSYYKLSANKVGEMISIRSKNMIYDYCKDVKRFKGVMPIECSLPQY*

Transcript Sequence

Transcript ID

Solyc12g007250.1.1
Transcript Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4DBR2_SOLLC)
Sequence

ATGGCAAAAATCATACATTTTAATTCCTTGGTTTTGATGATTATTGCAACAATCACATTT
CAATCATATTTAGCCAATGGATGGACATCAAGTAGCATGTATGTCAATTGGGGTGCTCAT
CATTGTAAACTTTTAGGGGATGATCTTCAACTTGTTCTTGATAAATCTGCAGGCTCTGGT
GCTCAATCGAAAAATTCATTTCTCTTTGGTAGCTTTGAAATGCTTCTCAAGTTGGTACCT
AACAACTCTGCTGGAACTGTCACAACATATTATTTATCTTCTACCGGTACCAAGCATGAT
GAAATCGATTTCGAGTTTCTAGGAAATATATCAGGACATCCTTATATTATACACACAAAT
ATTTACACCCAAGGTGTTGGAAATAGAGAGCAACAATTCTATCCATGGTTTGATCCAACT
GCTGCTTTTCACAATTACACCATTCATTGGAACCCTAACGCCGTTGTATGGTACATTGAT
AGTATTCCAATTAGGGTTTTTAGAAACTACCAATCCAAAGGCATTTCATTCCCAAACCAA
CAAGGGATGGGAGTCTACACTAGTCTATGGAATGCTGATGATTGGGCAACAAGAGGTGGT
CTTGTTAAAATTGATTGGACAAATGCACCATTTATTGCAACTTATAGAAATTTTAGACCA
AGAGCTTGCTATTGGAATGGACCAATGAGTATTTCCCAATGTGCAATTCCAACAAATTCC
AATTGGTGGGCTTCACCTTCATACTATAAATTGAGTGCAAATAAAGTTGGTGAAATGATC
TCAATTAGAAGCAAGAATATGATTTATGATTATTGCAAAGATGTGAAAAGATTCAAGGGA
GTTATGCCTATTGAGTGCTCATTGCCCCAATACTAA