Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g007230.2.1
CDS Infomation

auxin-regulated IAA8
Sequence

ATGTCTATATCCATTGAAGGGAACTCTGATAAGAGCTGTGTTTCATCAATGGACAGTAAA
GATTTGAACTTTAAGGCAACTGAACTTAGACTAGGCTTGCCTGGTTCTGAATCACCACCA
GATAAGAATGATTACCCACTTGGGGTTTTGAAAATTTTCCCTTCTGGAGCTAAAAGGGGT
TTTTCTGATACCATAAATGGTGATTCTGGGAGATGGGGTTTTGGATCTGAAGTTGATTTT
GTTAAAAACAGTAGCTTTATTGTTTCTCCAAAGGGTGTAAAAGTTGGAAATAAGATTCTT
GGTTCTGTTTGCAATGAGAGTAGCTCTGTGAAAGAGGGAACTCCAAAATCACCTAGACCA
GTGGAAGAGAAAAAGGCCTTGATTTGTAGTACTAATAGTCATGGGGTTGCTCCAGCTGCA
AAGGCACAAGTAGTAGGATGGCCACCAATTAGATCTTTTCGGAAGAATATGGTTAGTAAT
CCTCCAAAGACTGAGGAAGATGCAAATGGTAAGCTAGTAGCAGGTTGTCATTATGTCAAA
GTCAGCATGGATGGTGCTCCGTACCTGAGGAAGGTTGATCTTACTATGTACAACAGCTAT
AAGGATCTATCTTCAGCACTAGAGAAAATGTTCCGTTGCTTCAAGGCTGGCCAATGTGAA
ACTCAAGGCATTTCTCTAAGTGATGGACTTAAAGAAAGCAAATTGGCGGATCTTCTACAT
GGATCTGAATACGCTCTTACTTATGAAGACAAGGACGGTGATTGGATGCTTGTCGGTGAT
GTCCCATGGGAGATGTTCACAGAATCCTGCAAGAAGCTGAGGATCATGAAGAGTTCAGAT
GCAAATGGTCTAGCTCCAAGAGCCGCGGAGAAGTGCAAAGATCGTTAG

Peptide Sequence

PEP ID

Solyc12g007230.2.1
PEP Infomation

auxin-regulated IAA8
Sequence

MSISIEGNSDKSCVSSMDSKDLNFKATELRLGLPGSESPPDKNDYPLGVLKIFPSGAKRG
FSDTINGDSGRWGFGSEVDFVKNSSFIVSPKGVKVGNKILGSVCNESSSVKEGTPKSPRP
VEEKKALICSTNSHGVAPAAKAQVVGWPPIRSFRKNMVSNPPKTEEDANGKLVAGCHYVK
VSMDGAPYLRKVDLTMYNSYKDLSSALEKMFRCFKAGQCETQGISLSDGLKESKLADLLH
GSEYALTYEDKDGDWMLVGDVPWEMFTESCKKLRIMKSSDANGLAPRAAEKCKDR*

Transcript Sequence

Transcript ID

Solyc12g007230.2.1
Transcript Infomation

auxin-regulated IAA8
Sequence

AAAGATCAGACATGGCATAATTGTATAAAATTACAAACAAGCTACATAAAGCCCAAAGAT
CCCTTATTCTGCTACTTTGATAATCTTGCACACTATTTTCTTGAATTTTTGATGTCTATA
TCCATTGAAGGGAACTCTGATAAGAGCTGTGTTTCATCAATGGACAGTAAAGATTTGAAC
TTTAAGGCAACTGAACTTAGACTAGGCTTGCCTGGTTCTGAATCACCACCAGATAAGAAT
GATTACCCACTTGGGGTTTTGAAAATTTTCCCTTCTGGAGCTAAAAGGGGTTTTTCTGAT
ACCATAAATGGTGATTCTGGGAGATGGGGTTTTGGATCTGAAGTTGATTTTGTTAAAAAC
AGTAGCTTTATTGTTTCTCCAAAGGGTGTAAAAGTTGGAAATAAGATTCTTGGTTCTGTT
TGCAATGAGAGTAGCTCTGTGAAAGAGGGAACTCCAAAATCACCTAGACCAGTGGAAGAG
AAAAAGGCCTTGATTTGTAGTACTAATAGTCATGGGGTTGCTCCAGCTGCAAAGGCACAA
GTAGTAGGATGGCCACCAATTAGATCTTTTCGGAAGAATATGGTTAGTAATCCTCCAAAG
ACTGAGGAAGATGCAAATGGTAAGCTAGTAGCAGGTTGTCATTATGTCAAAGTCAGCATG
GATGGTGCTCCGTACCTGAGGAAGGTTGATCTTACTATGTACAACAGCTATAAGGATCTA
TCTTCAGCACTAGAGAAAATGTTCCGTTGCTTCAAGGCTGGCCAATGTGAAACTCAAGGC
ATTTCTCTAAGTGATGGACTTAAAGAAAGCAAATTGGCGGATCTTCTACATGGATCTGAA
TACGCTCTTACTTATGAAGACAAGGACGGTGATTGGATGCTTGTCGGTGATGTCCCATGG
GAGATGTTCACAGAATCCTGCAAGAAGCTGAGGATCATGAAGAGTTCAGATGCAAATGGT
CTAGCTCCAAGAGCCGCGGAGAAGTGCAAAGATCGTTAGAATCTGCAGTACTTTCGCTGC
AAACATTCAATCAATTCTCTATAAGCAATGAGAAGTCGAAATTCACATGTTTCTTCCTAT
TCATGTTAAGGTAGATCACCAAATCTGTGGATTTGAAGATCGACGCCAGGATTTCGAGTG
TTTCTGTCTTGGAAATCTTTAGTATAACTATTTGTGTTACATATATATTCATAATATATG
CAAAAGTATTCCAATTTATAGCCATAGTAGTATGTTGTTCTTTTTTTTTTCTGTATTGTT
ACTGCTTGAGTCTCCAAGGCTTGTGAAAGAAAATGTAAATGGTCTCACTTTTGTTTATAA
AAGTTTCTTTGTATGTGCATCTCGATTAAAGAGGCCCTG