Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g007170.2.1
CDS Infomation	Fatty acid beta-oxidation multifunctional protein (AHRD V3.3 *** A0A077DAS1_9ERIC)
Sequence	ATGGCGAAAGCAAAAGTGACGATGGAGGTTGGGAACGACGGCGTTGCGGTTATCACATTC GTCAATCCGCCGGTGAATGCTCTTGCTATTCAAATTTTCGCTGGTTTAAAGGAGAAATGG AATGAAGCAGCTATGAGAAATGATGTCAAAGCTATTGTTCTGACTGGATATGGTGGGCGG TTTTCTGGTGGTTTTGACATCAATGTTTTCGAAAAGGTTCATAAAACAGATGATGTTTCT CTATTGCCTGATGTTTCTGTTGATCTCGTGACGAACATTATGGAAGATGGAAAGAAGCCT GCAGTGGCTGTTGTGGAAGGACTTTGTCTTGGAGGTGGCTTGGAATTGGCATTGGGATGC CATGCACGCATTGCTGCGCCAAGAACACAACTTGGGTTGCCAGAGCTTAGCCTTGGAGTT CTTCCTGGCTCTGGAGGTACACAACGACTTCCAAGGCTTATAGGGTTGTCAAAGGCTATT GATATGATGATGACATCCAAACCAATAATGTCAGAAGAGGGGGAGAAGCTAGGTCTTATT GATGCAGTTGTCCCTTCCAAAGAGTTGTTAAAAGTAGCTAGACAGTGGGCCCTTGATATT GCAGAAAGGCGCAAACCTTGGATGCGTGCCCTTCACAGGACTGACAAAATTGGTTCCCTT TCAGAAGCACATGAAGTTCTGAAGTTGGCTAGGAAACAAGTGAAGCAAACTGCTCGGAAT ATGCCTCAGCACTTGGCATGCCTTGATGTAATTGAAGAAGGCATAGTCCATGGTGGATAT AATGGGATTCTCAAGGAAGCTAAAGTTTTTGAGGACCTTGTATTATCAGATACATCAAGA GGTCTTGTTCACGTATTTTTTGCCCAACGGGCTACATCAAAGGTACCTAATGTAACTGAT ATTGGTCTGAAACCAAGGTCAGTGAAGAAAGTTGCCATAATAGGTGGAGGTTTAATGGGT TCAGGCATAGCAACCTCTCTTGTTCTGAGCAACATATTTGTTATTATCAAGGAAATTAAT CCTGAGTATCTTCAGAAGGGGATAAAAACAGTTGAAGCAAATATCCGAGGTTTGGTAGCG AGAAAGAAGTTGCAGCAGGACAAAGCAAACAAAGCTTTGTCAATGGTTAAAGGTGTACTG GATTACTCAGAATTTAAGGATGTGGATATGGTCATTGAGGCTGTCATTGAAAATGTTCCT CTAAAACAACAAATCTTCATTGATATTGAGAAGATTTGTCCTCCCCACTGTATTTTGGCA TCCAATACATCTACTATCGACCTCAACATAATCGGGCAAAAGACGAGCTCTCAAGATCGG ATTATAGGAGCACACTTTTTCAGTCCTGCTCATGTGATGCCTCTGCTAGAGATAATCCGG ACGGAGAAGACATCTGCCCAAGCAATCCTCGATCTCATGGCTGTTGGCAAAACAATAAAG AAAGTACCTGTTGTAGTGGGAAACTGTACGGGTTTTGCTGTCAATAGGACATTCTTTCCA TATGCCCAGAGTGCACAGTTTCTCGCGAATCTTGGAGTGGATGTCTACAGGATTGATGCA CAAATCATTAACTTTGGTCTCCCCATCGGTCCATTCCAGCTTCAGGATTTAGCTGGATAT GGAGTTGCTATTGCAACAGGGAAAGAGTATAGTTCGGCTTTTCCTGATAGAGTATTTATG TCTCCACTGCTTGACCTTCTAATAAAAAGTGGTCGAAATGGTAAAAATAATGGAAAAGGA TACTACATTTACAAAAAGGGAGAGAAGCCAAGACCTGATCCTTCAGTTCTTCCAATTATT GAGGAGTCCAGAAGGCTCACTAATATTATGCCTGGAGGAAAGCCAATATCTATCACTGAT CAAGAAATTGTTGAGATGATACTCTTTCCAGTTGTGAACGAGGCATGCCGTGTTTTGGAT GAGGGGGTAGTAGTCCGAGCATCAGACCTTGATGTCGCTTCTGTACTTGGAATGAGTTTC CCATCTTACAGAGGTGGCATTGTTTTCTGGGGAGATACTGTTGGGGCTGGTCATATATAT AAAAGTCTCCGCAAGTGGTCAGAAGTATATGGTAATTTCTTCAAGCCATCAAAGTTCTTG GAAGAGAGAGCAGCAAAGGGCATTCCCTTGAGCGCTCCTGCTGCTACATCTTCGACATCA AGGTCACGCATGTAG

Peptide Sequence

PEP ID	Solyc12g007170.2.1
PEP Infomation	Fatty acid beta-oxidation multifunctional protein (AHRD V3.3 *** A0A077DAS1_9ERIC)
Sequence	MAKAKVTMEVGNDGVAVITFVNPPVNALAIQIFAGLKEKWNEAAMRNDVKAIVLTGYGGR FSGGFDINVFEKVHKTDDVSLLPDVSVDLVTNIMEDGKKPAVAVVEGLCLGGGLELALGC HARIAAPRTQLGLPELSLGVLPGSGGTQRLPRLIGLSKAIDMMMTSKPIMSEEGEKLGLI DAVVPSKELLKVARQWALDIAERRKPWMRALHRTDKIGSLSEAHEVLKLARKQVKQTARN MPQHLACLDVIEEGIVHGGYNGILKEAKVFEDLVLSDTSRGLVHVFFAQRATSKVPNVTD IGLKPRSVKKVAIIGGGLMGSGIATSLVLSNIFVIIKEINPEYLQKGIKTVEANIRGLVA RKKLQQDKANKALSMVKGVLDYSEFKDVDMVIEAVIENVPLKQQIFIDIEKICPPHCILA SNTSTIDLNIIGQKTSSQDRIIGAHFFSPAHVMPLLEIIRTEKTSAQAILDLMAVGKTIK KVPVVVGNCTGFAVNRTFFPYAQSAQFLANLGVDVYRIDAQIINFGLPIGPFQLQDLAGY GVAIATGKEYSSAFPDRVFMSPLLDLLIKSGRNGKNNGKGYYIYKKGEKPRPDPSVLPII EESRRLTNIMPGGKPISITDQEIVEMILFPVVNEACRVLDEGVVVRASDLDVASVLGMSF PSYRGGIVFWGDTVGAGHIYKSLRKWSEVYGNFFKPSKFLEERAAKGIPLSAPAATSSTS RSRM*

Transcript Sequence

Transcript ID	Solyc12g007170.2.1
Transcript Infomation	Fatty acid beta-oxidation multifunctional protein (AHRD V3.3 *** A0A077DAS1_9ERIC)
Sequence	ATAAATTCAGTTTTCTTCAGTCAATTCCCAAATTTTTGAGGATAATTTTCGTTGAAAATG GCGAAAGCAAAAGTGACGATGGAGGTTGGGAACGACGGCGTTGCGGTTATCACATTCGTC AATCCGCCGGTGAATGCTCTTGCTATTCAAATTTTCGCTGGTTTAAAGGAGAAATGGAAT GAAGCAGCTATGAGAAATGATGTCAAAGCTATTGTTCTGACTGGATATGGTGGGCGGTTT TCTGGTGGTTTTGACATCAATGTTTTCGAAAAGGTTCATAAAACAGATGATGTTTCTCTA TTGCCTGATGTTTCTGTTGATCTCGTGACGAACATTATGGAAGATGGAAAGAAGCCTGCA GTGGCTGTTGTGGAAGGACTTTGTCTTGGAGGTGGCTTGGAATTGGCATTGGGATGCCAT GCACGCATTGCTGCGCCAAGAACACAACTTGGGTTGCCAGAGCTTAGCCTTGGAGTTCTT CCTGGCTCTGGAGGTACACAACGACTTCCAAGGCTTATAGGGTTGTCAAAGGCTATTGAT ATGATGATGACATCCAAACCAATAATGTCAGAAGAGGGGGAGAAGCTAGGTCTTATTGAT GCAGTTGTCCCTTCCAAAGAGTTGTTAAAAGTAGCTAGACAGTGGGCCCTTGATATTGCA GAAAGGCGCAAACCTTGGATGCGTGCCCTTCACAGGACTGACAAAATTGGTTCCCTTTCA GAAGCACATGAAGTTCTGAAGTTGGCTAGGAAACAAGTGAAGCAAACTGCTCGGAATATG CCTCAGCACTTGGCATGCCTTGATGTAATTGAAGAAGGCATAGTCCATGGTGGATATAAT GGGATTCTCAAGGAAGCTAAAGTTTTTGAGGACCTTGTATTATCAGATACATCAAGAGGT CTTGTTCACGTATTTTTTGCCCAACGGGCTACATCAAAGGTACCTAATGTAACTGATATT GGTCTGAAACCAAGGTCAGTGAAGAAAGTTGCCATAATAGGTGGAGGTTTAATGGGTTCA GGCATAGCAACCTCTCTTGTTCTGAGCAACATATTTGTTATTATCAAGGAAATTAATCCT GAGTATCTTCAGAAGGGGATAAAAACAGTTGAAGCAAATATCCGAGGTTTGGTAGCGAGA AAGAAGTTGCAGCAGGACAAAGCAAACAAAGCTTTGTCAATGGTTAAAGGTGTACTGGAT TACTCAGAATTTAAGGATGTGGATATGGTCATTGAGGCTGTCATTGAAAATGTTCCTCTA AAACAACAAATCTTCATTGATATTGAGAAGATTTGTCCTCCCCACTGTATTTTGGCATCC AATACATCTACTATCGACCTCAACATAATCGGGCAAAAGACGAGCTCTCAAGATCGGATT ATAGGAGCACACTTTTTCAGTCCTGCTCATGTGATGCCTCTGCTAGAGATAATCCGGACG GAGAAGACATCTGCCCAAGCAATCCTCGATCTCATGGCTGTTGGCAAAACAATAAAGAAA GTACCTGTTGTAGTGGGAAACTGTACGGGTTTTGCTGTCAATAGGACATTCTTTCCATAT GCCCAGAGTGCACAGTTTCTCGCGAATCTTGGAGTGGATGTCTACAGGATTGATGCACAA ATCATTAACTTTGGTCTCCCCATCGGTCCATTCCAGCTTCAGGATTTAGCTGGATATGGA GTTGCTATTGCAACAGGGAAAGAGTATAGTTCGGCTTTTCCTGATAGAGTATTTATGTCT CCACTGCTTGACCTTCTAATAAAAAGTGGTCGAAATGGTAAAAATAATGGAAAAGGATAC TACATTTACAAAAAGGGAGAGAAGCCAAGACCTGATCCTTCAGTTCTTCCAATTATTGAG GAGTCCAGAAGGCTCACTAATATTATGCCTGGAGGAAAGCCAATATCTATCACTGATCAA GAAATTGTTGAGATGATACTCTTTCCAGTTGTGAACGAGGCATGCCGTGTTTTGGATGAG GGGGTAGTAGTCCGAGCATCAGACCTTGATGTCGCTTCTGTACTTGGAATGAGTTTCCCA TCTTACAGAGGTGGCATTGTTTTCTGGGGAGATACTGTTGGGGCTGGTCATATATATAAA AGTCTCCGCAAGTGGTCAGAAGTATATGGTAATTTCTTCAAGCCATCAAAGTTCTTGGAA GAGAGAGCAGCAAAGGGCATTCCCTTGAGCGCTCCTGCTGCTACATCTTCGACATCAAGG TCACGCATGTAGTAAGCAATACATTTACGACTTCAGCACCTACTTTGATCTGTTCATCAT TATGGTTCATAATATGTTTTAATGGTTACATGTAACATGCATAATGTTACTTCTTTTGGT CAGGGTGGGAACTGTTTGTAGACTTAAACAGATTGCTTAATTTTTATTTGAATAATGTTG GAAAAACATTTCAAGTGTTATTTCTTATTTCTAGAATAACGTAATAGACACCTCTACCGT GTCTAGGATA