Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g007020.2.1
CDS Infomation	DUF936 family protein (AHRD V3.3 *** A0A072UQI4_MEDTR)
Sequence	ATGGCAACTCTAACACCAGGAATTCTACTGAAGTTACTTCAGTCGATGAACACCGGTGCA AGAGTCACCGGCGACCACCGTACGCCGTTGTTGCAAGTGATTGGGATTGTACCGGCACTT TCGACTTCCGATTCCTTGTGGCCTCATAATGGGTTTTTTGTTCAGCTTTCTGATTCTCTC AACTCAACTTATGTTTCCCTTTCGGAGCGTGACACAGATCTCATCCTCACGAATCGGCTT CAGCTTGGTCAGTTTGTTCATGTTGACCGGTTCTGTTTTGATTCTCCGCCTGTACCACGG GCTGTTAATATTCGGTCTATTGCTGGTAGACATGGGTTTATTGGCTCGCCGGAACCCTTA ATTGCTCGGATTTCTGGTGGGGGGTTTCTGATTCAACCTGTTACTGATTCGGATCCTATT GCTGCTTATTTGTCGAAAAATGGAAGAACAGAGACGGGTTCAGGTCCGGGTTTGAAAGAT GGGAAGGAAAAACTCAGGGTAAGAGAAGTGCTTGCACCAAAAGAAAATGTGGAAATGAAG GAAGATTTGAGTAAAAATTGTTCTGCTCCGAAGAGATTTTCGTCTCCGGCATCAGTTAAG CAGAGATCAGTATCAGCAGGGAAGAAGAATTTGGTAGCTGAAAGGGATCCATCACCAGCA GGGAAAGTGAAGAGATCAGCATCACCAGTGCCATCAAAGTCCGTGGTGCCTAGTTTGGTA GCTGCAAAAGAGGAAAATCGGAGGACATCGAAGGAGCCAGCTATTATAGTTCCATCAAGG TATAGGCAGCCATCACCTACATCAGGGAGAAGGCAGGCAAGTCCATTGGTGGCAAGACGT ATGTCGTTATCACCTGGACGACGATTGTCTGGTGGTCTTAAGGTTTCTCCTGCTGCAGAT TCTTCTGGAAAGAAGAAGATGACTACTATTGCTTCTGGAATTTCCAAAGTTTCGGAGGCA ATTGCGGGGTCTGGTAAATCAAGTAGAAAAAGTTGGGATGAAGGTCCAGCAAATAGTGGT GATTCTTCGGAACAAGCAGAGAAGGTATTTTCGAAGAAAAAACCGGATATTCAGGCAATT CTGAGAACTCAGGCTGCTATTTCTAGGCGTTTGAGTGATGTAAGCTGTCATGCTGAGGAT TTTGGAAGTGAGGGAAAACTAAAATCTGGTGCCGCTGAAAATTCCCCCGACACTGAAAAG TCTAATAATGCAGCTCCAGTGATTCCAGTTCATGAGAAGAAGTGGACTGATGGAAGTGTA CCACTACACTCCGTAACCTCAGAACTTGCAAAGCTTGGAAAGGAGGCAATGCAAAGGAGA ATAACTGCTTCAACAGCTGCAGCTGAAGCATTGGAAGAGGCCCTTGCCATTGAGACTATT GTTAGAAATTTGAGTATGTTTGCAGATTTACGCTCAACATCCAACCCTAAAAACCCTCTC CCAACTATCGATCATTTCATGTCAATTTACGAAGATGTGGTGAAGTCAACATGCGTTGCT GAATCAATCACCAGCAATCGTGGCGTGCAAAAATCTAATGAGAATATGACTACGATGGAG CAACCAAAATCATCTCTTCTTTGGGTGGAGGCTGCTCTAGCAACTGATCTTAAAATTGTG TCTCTCTTGACAAATCAGAACAGTGGAACTCAACCAGCATCAGTGAAAAGCTCTCCGACG TATGAGTCAACAAAACCGTCTAACAAGAATCCTTTGATGGTTACTGGATTTTGGACAAGG GGTAATGGGATGAATGAGACTGTAGAACTTGCAAAGAAGCTGCAATCTGAAATGCAAATG TGGTTCATCACTTTTGTTGAAGAGTCACTAGATGCAGGTTTTCGTGTGTTCAAGAACTGC TCCCTGGCTTCTGTCGGAGCTTCTTCCAACTGTGATTCAATTCAAGCTATTTTGTCACAA CTCAAGCGAGTCAATAACTGGTTGGATCGCGTAGTCTCTAAGAAAGATGAACAACTGATA CAGAAGATTGAGTGCTTGAGACGAAAAATATATGGATTCGTCATTCAGCATGTTGGAACT ACTGCTGAAAATTCTTAA

Peptide Sequence

PEP ID	Solyc12g007020.2.1
PEP Infomation	DUF936 family protein (AHRD V3.3 *** A0A072UQI4_MEDTR)
Sequence	MATLTPGILLKLLQSMNTGARVTGDHRTPLLQVIGIVPALSTSDSLWPHNGFFVQLSDSL NSTYVSLSERDTDLILTNRLQLGQFVHVDRFCFDSPPVPRAVNIRSIAGRHGFIGSPEPL IARISGGGFLIQPVTDSDPIAAYLSKNGRTETGSGPGLKDGKEKLRVREVLAPKENVEMK EDLSKNCSAPKRFSSPASVKQRSVSAGKKNLVAERDPSPAGKVKRSASPVPSKSVVPSLV AAKEENRRTSKEPAIIVPSRYRQPSPTSGRRQASPLVARRMSLSPGRRLSGGLKVSPAAD SSGKKKMTTIASGISKVSEAIAGSGKSSRKSWDEGPANSGDSSEQAEKVFSKKKPDIQAI LRTQAAISRRLSDVSCHAEDFGSEGKLKSGAAENSPDTEKSNNAAPVIPVHEKKWTDGSV PLHSVTSELAKLGKEAMQRRITASTAAAEALEEALAIETIVRNLSMFADLRSTSNPKNPL PTIDHFMSIYEDVVKSTCVAESITSNRGVQKSNENMTTMEQPKSSLLWVEAALATDLKIV SLLTNQNSGTQPASVKSSPTYESTKPSNKNPLMVTGFWTRGNGMNETVELAKKLQSEMQM WFITFVEESLDAGFRVFKNCSLASVGASSNCDSIQAILSQLKRVNNWLDRVVSKKDEQLI QKIECLRRKIYGFVIQHVGTTAENS*

Transcript Sequence

Transcript ID	Solyc12g007020.2.1
Transcript Infomation	DUF936 family protein (AHRD V3.3 *** A0A072UQI4_MEDTR)
Sequence	CTATATAATTTGCTCTGTTTTTTTTTTCACCATAGCTAAACAATGGCAACTCTAACACCA GGAATTCTACTGAAGTTACTTCAGTCGATGAACACCGGTGCAAGAGTCACCGGCGACCAC CGTACGCCGTTGTTGCAAGTGATTGGGATTGTACCGGCACTTTCGACTTCCGATTCCTTG TGGCCTCATAATGGGTTTTTTGTTCAGCTTTCTGATTCTCTCAACTCAACTTATGTTTCC CTTTCGGAGCGTGACACAGATCTCATCCTCACGAATCGGCTTCAGCTTGGTCAGTTTGTT CATGTTGACCGGTTCTGTTTTGATTCTCCGCCTGTACCACGGGCTGTTAATATTCGGTCT ATTGCTGGTAGACATGGGTTTATTGGCTCGCCGGAACCCTTAATTGCTCGGATTTCTGGT GGGGGGTTTCTGATTCAACCTGTTACTGATTCGGATCCTATTGCTGCTTATTTGTCGAAA AATGGAAGAACAGAGACGGGTTCAGGTCCGGGTTTGAAAGATGGGAAGGAAAAACTCAGG GTAAGAGAAGTGCTTGCACCAAAAGAAAATGTGGAAATGAAGGAAGATTTGAGTAAAAAT TGTTCTGCTCCGAAGAGATTTTCGTCTCCGGCATCAGTTAAGCAGAGATCAGTATCAGCA GGGAAGAAGAATTTGGTAGCTGAAAGGGATCCATCACCAGCAGGGAAAGTGAAGAGATCA GCATCACCAGTGCCATCAAAGTCCGTGGTGCCTAGTTTGGTAGCTGCAAAAGAGGAAAAT CGGAGGACATCGAAGGAGCCAGCTATTATAGTTCCATCAAGGTATAGGCAGCCATCACCT ACATCAGGGAGAAGGCAGGCAAGTCCATTGGTGGCAAGACGTATGTCGTTATCACCTGGA CGACGATTGTCTGGTGGTCTTAAGGTTTCTCCTGCTGCAGATTCTTCTGGAAAGAAGAAG ATGACTACTATTGCTTCTGGAATTTCCAAAGTTTCGGAGGCAATTGCGGGGTCTGGTAAA TCAAGTAGAAAAAGTTGGGATGAAGGTCCAGCAAATAGTGGTGATTCTTCGGAACAAGCA GAGAAGGTATTTTCGAAGAAAAAACCGGATATTCAGGCAATTCTGAGAACTCAGGCTGCT ATTTCTAGGCGTTTGAGTGATGTAAGCTGTCATGCTGAGGATTTTGGAAGTGAGGGAAAA CTAAAATCTGGTGCCGCTGAAAATTCCCCCGACACTGAAAAGTCTAATAATGCAGCTCCA GTGATTCCAGTTCATGAGAAGAAGTGGACTGATGGAAGTGTACCACTACACTCCGTAACC TCAGAACTTGCAAAGCTTGGAAAGGAGGCAATGCAAAGGAGAATAACTGCTTCAACAGCT GCAGCTGAAGCATTGGAAGAGGCCCTTGCCATTGAGACTATTGTTAGAAATTTGAGTATG TTTGCAGATTTACGCTCAACATCCAACCCTAAAAACCCTCTCCCAACTATCGATCATTTC ATGTCAATTTACGAAGATGTGGTGAAGTCAACATGCGTTGCTGAATCAATCACCAGCAAT CGTGGCGTGCAAAAATCTAATGAGAATATGACTACGATGGAGCAACCAAAATCATCTCTT CTTTGGGTGGAGGCTGCTCTAGCAACTGATCTTAAAATTGTGTCTCTCTTGACAAATCAG AACAGTGGAACTCAACCAGCATCAGTGAAAAGCTCTCCGACGTATGAGTCAACAAAACCG TCTAACAAGAATCCTTTGATGGTTACTGGATTTTGGACAAGGGGTAATGGGATGAATGAG ACTGTAGAACTTGCAAAGAAGCTGCAATCTGAAATGCAAATGTGGTTCATCACTTTTGTT GAAGAGTCACTAGATGCAGGTTTTCGTGTGTTCAAGAACTGCTCCCTGGCTTCTGTCGGA GCTTCTTCCAACTGTGATTCAATTCAAGCTATTTTGTCACAACTCAAGCGAGTCAATAAC TGGTTGGATCGCGTAGTCTCTAAGAAAGATGAACAACTGATACAGAAGATTGAGTGCTTG AGACGAAAAATATATGGATTCGTCATTCAGCATGTTGGAACTACTGCTGAAAATTCTTAA GTTTTGTCTTCTTTTCTTTCTTCAATGTAAGGATGATAATTCTTCAACTCTATGTTTCAG ACATTCATCTATTAAAAGATTTTAATAATTC