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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g006880.2.1
CDS Infomation

PPPDE thiol peptidase family protein, putative (AHRD V3.3 *** I3T9Q3_MEDTR)
Sequence

ATGGGAGAAGAAAGCACCTCAAATTCCAAGGCTGATGATAATAATAATGCAGCTAAAACT
GATGGAAGCTATGAGACACCAGTTATATTGAATGTGTATGATCTCACACCTGCAAATCAG
TACTCAGTTTGGCTTGGCTTTGGAATCTTTCATTCTGGTATTGAAGTTCATGGTATGGAA
TATGGATATGGAGCGCATGACTTTCCCATAAGTGGCGTGTTTGAAGTGGAACCTAAGAGC
TGCCCTGGTTTCATCTACAGATGTTCAGTCCCATTGGGTCGTATTAAGATGCCTCCTTCT
GAATTTCATGCATTTCTTGAGGATGTGGCTTCTGAGTATCACGGGGATACGTATCACCTC
ATTTCAAAGAACTGTAACCATTTTACAGATGACATAGCACAGAGATTAACAGGGAAAGGG
ATACCTGGATGGGTGAATCGGCTTGCCAGGGTTGGTGCTTTCTGCAGTTGTCTTCTTCCT
GAGAGCCTCCAAGCGACAACTGTTAAACAGCTTCCTGAGTATCACCATTGTACAGAAGAA
GATGGAAGTGGATCGATGACATCTACAACGCCCCATGAACCAACTGAAAGCGAAGACGGA
GATCAAGATAAGCACTTGTTGTCATCTCCAATCAGTAGTCGTGAAGTGGCTTTCATAAGA
GAGACTCAAAGGTGA

Peptide Sequence

PEP ID

Solyc12g006880.2.1
PEP Infomation

PPPDE thiol peptidase family protein, putative (AHRD V3.3 *** I3T9Q3_MEDTR)
Sequence

MGEESTSNSKADDNNNAAKTDGSYETPVILNVYDLTPANQYSVWLGFGIFHSGIEVHGME
YGYGAHDFPISGVFEVEPKSCPGFIYRCSVPLGRIKMPPSEFHAFLEDVASEYHGDTYHL
ISKNCNHFTDDIAQRLTGKGIPGWVNRLARVGAFCSCLLPESLQATTVKQLPEYHHCTEE
DGSGSMTSTTPHEPTESEDGDQDKHLLSSPISSREVAFIRETQR*

Transcript Sequence

Transcript ID

Solyc12g006880.2.1
Transcript Infomation

PPPDE thiol peptidase family protein, putative (AHRD V3.3 *** I3T9Q3_MEDTR)
Sequence

ATTTCCATTTTTACAAAGTTCAAACCTTTTTCTCTTTGCCAGAGAGACAAATCAAGAATC
AAAAGCTATTTGCTTTTATACCAAAAATAAAAAAAAATGGACTCAAAAATACAATCTTTT
TCCTAATCCCAGATTTCCATTATTACAGAAATTTCAAAATAAAAAAAAAAGAAAAAGAGA
GGAGTCAAATGGGAGAAGAAAGCACCTCAAATTCCAAGGCTGATGATAATAATAATGCAG
CTAAAACTGATGGAAGCTATGAGACACCAGTTATATTGAATGTGTATGATCTCACACCTG
CAAATCAGTACTCAGTTTGGCTTGGCTTTGGAATCTTTCATTCTGGTATTGAAGTTCATG
GTATGGAATATGGATATGGAGCGCATGACTTTCCCATAAGTGGCGTGTTTGAAGTGGAAC
CTAAGAGCTGCCCTGGTTTCATCTACAGATGTTCAGTCCCATTGGGTCGTATTAAGATGC
CTCCTTCTGAATTTCATGCATTTCTTGAGGATGTGGCTTCTGAGTATCACGGGGATACGT
ATCACCTCATTTCAAAGAACTGTAACCATTTTACAGATGACATAGCACAGAGATTAACAG
GGAAAGGGATACCTGGATGGGTGAATCGGCTTGCCAGGGTTGGTGCTTTCTGCAGTTGTC
TTCTTCCTGAGAGCCTCCAAGCGACAACTGTTAAACAGCTTCCTGAGTATCACCATTGTA
CAGAAGAAGATGGAAGTGGATCGATGACATCTACAACGCCCCATGAACCAACTGAAAGCG
AAGACGGAGATCAAGATAAGCACTTGTTGTCATCTCCAATCAGTAGTCGTGAAGTGGCTT
TCATAAGAGAGACTCAAAGGTGAAAACATGCTGCCTGAAGGGGATTCAATATGTATTATC
GGTTTATTAAAGGCTATCGACTCGCCCCACAGAACCACTGCTCAAGTTCTCCATTTGCTT
GCTATATGTATTACTAGTCCATTGATTTTCAAACCTTTTTTGCTTTTGGTTATTAAGGTT
TCCTTTTAGTGTGCAATATGTATTAGTTCAAAGTGACAGGATTGTCATCTATTGAGTTAT
GCCTTTGTTACAGATCACAAATATCCATGTAAACATTCTGAGTTTGGAAGATGAAAACAG
GCCAGTATTTGTGAAAAAATGAGATAACCATACATTTATTTAATACTACACCAGATACTC
ATTGAGGAAATG