Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g006860.2.1
CDS Infomation

brassinosteroid hydroxylase
Sequence

ATGGAAAATTTGTTGAAGATTATTGGAGTAATTTTGTTGCTTTCAATTTTAATGATAAGA
GTTTTTGGTTATTTATGGTTAAGACCAAGAAAAATTGAAAAACATTTTGCTAAACAAGGT
ATTAGAGGTCCACCTTATAAATTTTTCATTGGAAATGCTAAAGAAATTGTTAGTTTAATG
CTAAAGGCTTCTTCTCAAACTATGCCTTTATCACACAATATTCTACCAAGAGTTCTTTCA
TTCTATCATCATTGGAAGAAAATTTATGGTGCAACATTTTTAGTGTGGTTTGGGCCAACA
CCACGTTTGGCTGTGGCTGATCCTGATCTTATTAGAGAAATTTTCACTACAAAATCTGAA
TTTTATGAGAAAAATGAAGCTCATCCATTGATTAAACAACTTGAAGGAGATGGTCTTCTA
AGTCTAAAAGGTGAAAAATGGGCTCATCATAGGAAAATTATTACCCCTACTTTCCATATG
GAAAATCTTAAATTGTTAGTACCAGGGGCAGCTAGCAAAGTGATTGAAATGTTGGACAAA
TTGACACCAAATTTAAAGAATGGAGAGATTGAAATCGAAGTATCAGAGTGGTTTCAAACT
CTTACAGAAGACATCGTAGCTCAAACAGCTTTTGGCCATAGTTATGAACAAGGAAAAGCT
ATTTTTAGGCTACAAGCTCAACAAATGGTACTTGCTGCTGAAGCATTTCAGAAAGTCTTC
ATACCTGGCTACAGGTTCCTACCGACGAAACGAAACATCAAATCGTGGAAACTTGACACG
GAGGTTAAGAAGTTGCTAATGAGGTTAATTCAAGAAAGGACAGATAATTGGGATAAGAAT
GAAATGCAAGAAAACAATGGGCCAAAAGACTTATTGGGCCTTATGATCCAAGCAAGTATT
AAGGAATCATTACAATTATCATCATCCATTAACAGCCCAATTCATCATAATTCTTCTACA
CATAATCATAATCACAATCATAATAATAATCATAATAATAATCCCTCCATGATCACACCA
AATGATATTGCTGAAGAATGCAAGACTTTCTTCTTTGCTGGTGAACAAACGACGTCGAAT
TTGCTGACGTGGACGACCGTGCTACTAGCTATGCATCCACAATGGCAAGACCTAGCTCGC
GACGAGGTGATCAAAGTGTGCGGCTCACGTGCCATACCTTCCAAAGACGATCTTGCCAAG
CTTAAAATGCTGAGCATGATACTCAATGAGTCCTTGCGCCTTTACCCTCCGATCGTCGCG
ACGATTCGAAGGGCAAAGGCTGATGTGGATCTCGGAGGATGCAAAATCCCTCTCGGGACG
GAAGTGTTGATTCCGATTCTAGCGATCCATCACGATCAAGCTATATGGGGTAACGATGCA
AACGAGTTCAACCCTAGTAGATTCTCCGAAGGGGTGGCTCGAGCCGCTAAGCATCCTGTG
GGGTACATTCCATTTGGGCTTGGAGTACGACAATGCATAGGTCAGAACTTAGCGATCTTA
CAAACTAAGTTGACTCTAGCAATTATACTTCAGCGATACGTCTTACGATTATCGCCACAA
TATAAACACGCCCCAACCGTGCTGATGCTACTTCATCCTCAATATGGTGCACCCGTCATC
TTCAAACAACGGTTGACTCATGACCCCACATTTGACAAAAGCTCATAA

Peptide Sequence

PEP ID

Solyc12g006860.2.1
PEP Infomation

brassinosteroid hydroxylase
Sequence

MENLLKIIGVILLLSILMIRVFGYLWLRPRKIEKHFAKQGIRGPPYKFFIGNAKEIVSLM
LKASSQTMPLSHNILPRVLSFYHHWKKIYGATFLVWFGPTPRLAVADPDLIREIFTTKSE
FYEKNEAHPLIKQLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVPGAASKVIEMLDK
LTPNLKNGEIEIEVSEWFQTLTEDIVAQTAFGHSYEQGKAIFRLQAQQMVLAAEAFQKVF
IPGYRFLPTKRNIKSWKLDTEVKKLLMRLIQERTDNWDKNEMQENNGPKDLLGLMIQASI
KESLQLSSSINSPIHHNSSTHNHNHNHNNNHNNNPSMITPNDIAEECKTFFFAGEQTTSN
LLTWTTVLLAMHPQWQDLARDEVIKVCGSRAIPSKDDLAKLKMLSMILNESLRLYPPIVA
TIRRAKADVDLGGCKIPLGTEVLIPILAIHHDQAIWGNDANEFNPSRFSEGVARAAKHPV
GYIPFGLGVRQCIGQNLAILQTKLTLAIILQRYVLRLSPQYKHAPTVLMLLHPQYGAPVI
FKQRLTHDPTFDKSS*

Transcript Sequence

Transcript ID

Solyc12g006860.2.1
Transcript Infomation

brassinosteroid hydroxylase
Sequence

ATAAAATAATTTAATTTTTATTTAATTCGTTGACCCTTATAATTCCAATGGCGGCCCCTA
CGCCGTTGGCCTTGCCAAACAAACTTCTCTCTCTTTTCCTTTGTATGCTTTAGTTTTTTG
CATTTAAAAAGAACCAACACACTCACAAAAAAATAAAAACCATATCACACAAACTTGAAA
AGAAAAAGAAAAATGGAAAATTTGTTGAAGATTATTGGAGTAATTTTGTTGCTTTCAATT
TTAATGATAAGAGTTTTTGGTTATTTATGGTTAAGACCAAGAAAAATTGAAAAACATTTT
GCTAAACAAGGTATTAGAGGTCCACCTTATAAATTTTTCATTGGAAATGCTAAAGAAATT
GTTAGTTTAATGCTAAAGGCTTCTTCTCAAACTATGCCTTTATCACACAATATTCTACCA
AGAGTTCTTTCATTCTATCATCATTGGAAGAAAATTTATGGTGCAACATTTTTAGTGTGG
TTTGGGCCAACACCACGTTTGGCTGTGGCTGATCCTGATCTTATTAGAGAAATTTTCACT
ACAAAATCTGAATTTTATGAGAAAAATGAAGCTCATCCATTGATTAAACAACTTGAAGGA
GATGGTCTTCTAAGTCTAAAAGGTGAAAAATGGGCTCATCATAGGAAAATTATTACCCCT
ACTTTCCATATGGAAAATCTTAAATTGTTAGTACCAGGGGCAGCTAGCAAAGTGATTGAA
ATGTTGGACAAATTGACACCAAATTTAAAGAATGGAGAGATTGAAATCGAAGTATCAGAG
TGGTTTCAAACTCTTACAGAAGACATCGTAGCTCAAACAGCTTTTGGCCATAGTTATGAA
CAAGGAAAAGCTATTTTTAGGCTACAAGCTCAACAAATGGTACTTGCTGCTGAAGCATTT
CAGAAAGTCTTCATACCTGGCTACAGGTTCCTACCGACGAAACGAAACATCAAATCGTGG
AAACTTGACACGGAGGTTAAGAAGTTGCTAATGAGGTTAATTCAAGAAAGGACAGATAAT
TGGGATAAGAATGAAATGCAAGAAAACAATGGGCCAAAAGACTTATTGGGCCTTATGATC
CAAGCAAGTATTAAGGAATCATTACAATTATCATCATCCATTAACAGCCCAATTCATCAT
AATTCTTCTACACATAATCATAATCACAATCATAATAATAATCATAATAATAATCCCTCC
ATGATCACACCAAATGATATTGCTGAAGAATGCAAGACTTTCTTCTTTGCTGGTGAACAA
ACGACGTCGAATTTGCTGACGTGGACGACCGTGCTACTAGCTATGCATCCACAATGGCAA
GACCTAGCTCGCGACGAGGTGATCAAAGTGTGCGGCTCACGTGCCATACCTTCCAAAGAC
GATCTTGCCAAGCTTAAAATGCTGAGCATGATACTCAATGAGTCCTTGCGCCTTTACCCT
CCGATCGTCGCGACGATTCGAAGGGCAAAGGCTGATGTGGATCTCGGAGGATGCAAAATC
CCTCTCGGGACGGAAGTGTTGATTCCGATTCTAGCGATCCATCACGATCAAGCTATATGG
GGTAACGATGCAAACGAGTTCAACCCTAGTAGATTCTCCGAAGGGGTGGCTCGAGCCGCT
AAGCATCCTGTGGGGTACATTCCATTTGGGCTTGGAGTACGACAATGCATAGGTCAGAAC
TTAGCGATCTTACAAACTAAGTTGACTCTAGCAATTATACTTCAGCGATACGTCTTACGA
TTATCGCCACAATATAAACACGCCCCAACCGTGCTGATGCTACTTCATCCTCAATATGGT
GCACCCGTCATCTTCAAACAACGGTTGACTCATGACCCCACATTTGACAAAAGCTCATAA
CATGTCTAAGTCTCCTTTTGGTGTGTGAGTGCATATATTCTTGGAGAAAAGAAAAAAAAA
TATTAAATATGTTGTTGGAAGGATTAATTAATTATAGGAGTAGGGAGAAAATTTATTTTA
TTCCTTTTTTTTTTTGTTCACCAAATATTAGTATTACTAACTAACCTATCAAGTAGAGTC
ATCATCATGCCTTGTTTTTTATTTTATTTTGCCCAAAATTGCTTGGATTTTTGGCATGTT
TATTTTAGGGTTATTACATAGTGACTCAATTTAGTAGATTTTATATTATTTTCCCACTCT
ATGTATATGTATATGTAATGTATGTATATTGGCTCAAGCCATAGTACAATTTTGTAATAT
TCTCATGTATATCCTTCTTTTTCTTGAAT