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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g006800.2.1
CDS Infomation

Two-component response regulator (AHRD V3.3 *** W9R8R3_9ROSA)
Sequence

ATGAATATGGCATCATCAAATTCAGAATTAAGCCTTGAATGCAAACCCCATCAAAGTTAT
TCTATGCTTTTGAAATCATTTGGTGAGAAAAATGTTGATCAAACACAAAATCTTGAAGAA
TTCTTAACTAGACTTGAAGAAGAAAGGGTCAAGATTGATGCATTCAAACGTGAACTTCCC
CTTTGCATGCAACTTTTAACCAATGCTATGGAGGCTTCAAGGCAACAACTTCACTCCCAT
AGAGAAAATAATCATATTGGACAAATGAGACCAGTTCTTGAAGAATTCATTCCACTTAAG
AATAACAATGCAAGTGTTGAATTAGGAGATGAAAAATTAGTGGCAAATAACACTTCTACT
ATTGTTGATAATAAGGCAAATTGGATGACTTCTGCCCAATTATGGAGTCCACCAAGTGAT
CATCAAGAAACAAAACAACAAGTACAAATATCAACTACTTGTAACAAAGAAAATGATCAT
CATAACAATATAGGCTTTTCTATTGCCTCAAAATTAGCATTGGATAACAACAATTCTTCA
TGTCCAAGTCCAACAACACTAGCACTTGCTTCATCTAATAAACAAAATAATAATGAAACA
TTATTACAAGTGGAAGATAATAACAAGAATTTGGAAATTCAACAAGATTCTCAAGGCATT
GGAGGTGGTACCAATAGCACAAGCACAAGTACTCAACAACAACAACCACATAGAAAGGCA
AGAAGATGTTGGTCACCTGATTTGCATAGGCGTTTTGTTAATGCTCTTCAAATGTTAGGT
GGTTCTCAAGTGGCCACTCCAAAACAAATCAGAGAGTTGATGAAAGTTGATGGATTGACC
AATGATGAAGTTAAAAGCCATTTGCAGAAGTACAGACTTCACACTCGAAGACCAAGTCCA
AGTCCACAAGCAACAACAGCACCACCCCACTTGGTGGTTTTAGGTGGGATATGGGTCCCA
CCTGAGTACGCAGCCGCAGCCGCACACGGTGGTGCACCACCTACAGCCACATTTTATGGA
CCACATTCAACTAGCCATGCACCATCACCTCACTATATTGCGGCCCCACAAGCATTAGCT
CAAGAGTTTTATAATACGCCACAACCATTACAAACACTGCACCACCAACAATTGTACCAT
CCTGGTAGTCACATGTACAAGCCATCGCCAAAAGCACATTCTCATAGCTCGCCGGAATCG
GACGCCCGTGGAACTGGTCAACACGGTGATCGGTCATCGGAGAGTATCGAAGACGGAAAA
TCGGAGAGTTATAGTAGTGAAAATGGTGGAGAGAGAAAGGTTGTGGTACACAAATTCTAG

Peptide Sequence

PEP ID

Solyc12g006800.2.1
PEP Infomation

Two-component response regulator (AHRD V3.3 *** W9R8R3_9ROSA)
Sequence

MNMASSNSELSLECKPHQSYSMLLKSFGEKNVDQTQNLEEFLTRLEEERVKIDAFKRELP
LCMQLLTNAMEASRQQLHSHRENNHIGQMRPVLEEFIPLKNNNASVELGDEKLVANNTST
IVDNKANWMTSAQLWSPPSDHQETKQQVQISTTCNKENDHHNNIGFSIASKLALDNNNSS
CPSPTTLALASSNKQNNNETLLQVEDNNKNLEIQQDSQGIGGGTNSTSTSTQQQQPHRKA
RRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSP
SPQATTAPPHLVVLGGIWVPPEYAAAAAHGGAPPTATFYGPHSTSHAPSPHYIAAPQALA
QEFYNTPQPLQTLHHQQLYHPGSHMYKPSPKAHSHSSPESDARGTGQHGDRSSESIEDGK
SESYSSENGGERKVVVHKF*

Transcript Sequence

Transcript ID

Solyc12g006800.2.1
Transcript Infomation

Two-component response regulator (AHRD V3.3 *** W9R8R3_9ROSA)
Sequence

CCTCTTTCAAGAATCTTTACTTTATTCTCCCTCGAACTCAACCCTCTAAAAAGACCACCA
TCCTCTTCACAAATATTTGAATCCACCTTGTGTTCATAAACAAACAATTCCTCCCTTTTT
TTCCTCTATCCACACACACCACTTTGTGTTTCAAAAACCTAACATTTTTTTTTATCATCT
TCCTATTTGAACATGAAAACAAATCCATTTGTTGTTTGAGGATTATATACGCGGAATATC
TGAATAGACACTTGTACTTGCATCGAATTTTACAGATAGACCTAGCTCGTTTTTTCGAGT
TTTTGAGAAAATATATAGGCAATCATGAATATGGCATCATCAAATTCAGAATTAAGCCTT
GAATGCAAACCCCATCAAAGTTATTCTATGCTTTTGAAATCATTTGGTGAGAAAAATGTT
GATCAAACACAAAATCTTGAAGAATTCTTAACTAGACTTGAAGAAGAAAGGGTCAAGATT
GATGCATTCAAACGTGAACTTCCCCTTTGCATGCAACTTTTAACCAATGCTATGGAGGCT
TCAAGGCAACAACTTCACTCCCATAGAGAAAATAATCATATTGGACAAATGAGACCAGTT
CTTGAAGAATTCATTCCACTTAAGAATAACAATGCAAGTGTTGAATTAGGAGATGAAAAA
TTAGTGGCAAATAACACTTCTACTATTGTTGATAATAAGGCAAATTGGATGACTTCTGCC
CAATTATGGAGTCCACCAAGTGATCATCAAGAAACAAAACAACAAGTACAAATATCAACT
ACTTGTAACAAAGAAAATGATCATCATAACAATATAGGCTTTTCTATTGCCTCAAAATTA
GCATTGGATAACAACAATTCTTCATGTCCAAGTCCAACAACACTAGCACTTGCTTCATCT
AATAAACAAAATAATAATGAAACATTATTACAAGTGGAAGATAATAACAAGAATTTGGAA
ATTCAACAAGATTCTCAAGGCATTGGAGGTGGTACCAATAGCACAAGCACAAGTACTCAA
CAACAACAACCACATAGAAAGGCAAGAAGATGTTGGTCACCTGATTTGCATAGGCGTTTT
GTTAATGCTCTTCAAATGTTAGGTGGTTCTCAAGTGGCCACTCCAAAACAAATCAGAGAG
TTGATGAAAGTTGATGGATTGACCAATGATGAAGTTAAAAGCCATTTGCAGAAGTACAGA
CTTCACACTCGAAGACCAAGTCCAAGTCCACAAGCAACAACAGCACCACCCCACTTGGTG
GTTTTAGGTGGGATATGGGTCCCACCTGAGTACGCAGCCGCAGCCGCACACGGTGGTGCA
CCACCTACAGCCACATTTTATGGACCACATTCAACTAGCCATGCACCATCACCTCACTAT
ATTGCGGCCCCACAAGCATTAGCTCAAGAGTTTTATAATACGCCACAACCATTACAAACA
CTGCACCACCAACAATTGTACCATCCTGGTAGTCACATGTACAAGCCATCGCCAAAAGCA
CATTCTCATAGCTCGCCGGAATCGGACGCCCGTGGAACTGGTCAACACGGTGATCGGTCA
TCGGAGAGTATCGAAGACGGAAAATCGGAGAGTTATAGTAGTGAAAATGGTGGAGAGAGA
AAGGTTGTGGTACACAAATTCTAGCAATTTTATGTGAT