Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g006450.2.1
CDS Infomation

gamma-aminobutyrate transaminase subunit precursor isozyme 3
Sequence

ATGGCCAAGATTACTAGTTTAATTGGATCTGGAATTGTTGCAGCTACCAACCAGGTTGGT
CCTCACGTAAAGCATATCCCTGCTGTTGGCAATTTGCAAAAACAAATCGTTAGCGATCAA
ATACAGGTCAGATGGAGTAGCACTGAGACATCTTTGAAGAATGACATCTCAGCAACTGAT
GTTAGAGGATACAAGGGGCATGATATGTTGGCACCCTTCACTGCCGGATGGCATTCTACT
GATTTGGAACCTTTAGTCATACAAAAATCCGAGGGTTCGTATGTCTATGATGTTAACGGG
AAGAAGTACCTCGATGCTCTAGCTGGTTTGTGGTGCACATCTTTGGGTGGAAATGAGCCT
CGTCTTGTTGCAGCCGCAACTAAACAACTCAACGAGTTGCCCTTTTACCATTCATTTTGG
AATCGTAGCACAAAACCTTCTTTGGATCTCGCGAAGGAGCTCCTAGATCTTTTTACTGCA
AATAAAATGGCGAAAGCTTTTTTCACAAACAGCGGATCAGAAGCCAATGACACACAGGTG
AAACTGGTATGGTATTACAACAATGCACTCGGGAGGCCAGACAAAAAGAAATTTATTGCT
CGAACAAAATCATACCACGGATCAACTCTCATTTCCGCTAGTCTCTCTGGTCTTCCTGCA
CTACATCAGCAATTCGATCTACCAGCTCCGTTTGTTCTGCATACTGACTGCCCTCATTTT
TGGCGCTTTCATCAGCCAGGTGAGACGGAAGAGGAGTTCTCGACAAGATTGGCTAATAAT
TTGGAAAATCTCATACTCAAAGAGGGACCTGAAACAATAGCTGCTTTCATTGCGGAGCCA
GTCATGGGGGCAGGAGGTGTCATACCTCCTCCCGCGACCTATTTTGAAAAGGTCCAAGCT
ATACTAAAGAAGTACGACATTCTTTTCATCGCGGATGAGGTTATATGTGGATTTGGAAGG
CTCGGGACAATGTTCGGATGTGAAAAGTACAACATTAAACCTGATCTTGTCTCTGTAGCA
AAGGCTCTTTCCTCCGGATATATGCCAATTGGGGCTGTCCTTGTAAGCCCTGAAGTCTCC
GATGTCATATATTCTCAAAGCAACAAGCTCGGTACATTTTCCCATGGATTTACTTACTCG
GGGCACCCTGTCTCGTGTGCAGTTGCCTTGGAAACACTGAAGATCTACAAGGAAAGAAAT
ATTATTGAGCAAGTAAACAGAATATCACCAAAGTTCCAAGAAGGTCTGAAGGCGTTTTCT
GATAGTCCCATAATCGGAGAGATAAGGGGAACTGGTTTGCTACATGGTACAGAGTTTACA
GATAACAAATCTCCAAATGATCCATTCCCTCCTGAATGGGGTATCGGTGCATATTTTGGA
GCACGGTGTGAGAAGCATGGAGTGTTGGTACGCGTTGCTGGTGATAACATAATGATGTCT
CCTCCCTACATTCTTAGTTTGGAAGAAATTGATGAGTTGATAATCAAATATGGGAAAGCA
TTGAAGGATACTGAAAATAGAGTAGAAGAACTCAAGTCTCAGAAGAAGTAA

Peptide Sequence

PEP ID

Solyc12g006450.2.1
PEP Infomation

gamma-aminobutyrate transaminase subunit precursor isozyme 3
Sequence

MAKITSLIGSGIVAATNQVGPHVKHIPAVGNLQKQIVSDQIQVRWSSTETSLKNDISATD
VRGYKGHDMLAPFTAGWHSTDLEPLVIQKSEGSYVYDVNGKKYLDALAGLWCTSLGGNEP
RLVAAATKQLNELPFYHSFWNRSTKPSLDLAKELLDLFTANKMAKAFFTNSGSEANDTQV
KLVWYYNNALGRPDKKKFIARTKSYHGSTLISASLSGLPALHQQFDLPAPFVLHTDCPHF
WRFHQPGETEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQA
ILKKYDILFIADEVICGFGRLGTMFGCEKYNIKPDLVSVAKALSSGYMPIGAVLVSPEVS
DVIYSQSNKLGTFSHGFTYSGHPVSCAVALETLKIYKERNIIEQVNRISPKFQEGLKAFS
DSPIIGEIRGTGLLHGTEFTDNKSPNDPFPPEWGIGAYFGARCEKHGVLVRVAGDNIMMS
PPYILSLEEIDELIIKYGKALKDTENRVEELKSQKK*

Transcript Sequence

Transcript ID

Solyc12g006450.2.1
Transcript Infomation

gamma-aminobutyrate transaminase subunit precursor isozyme 3
Sequence

TTATGAATCGGAGAAAATAGTACGACTAATGTCCAAATTCAATGTACATTATAAAATTTA
AACAGTGTCACGTAAATTAAAACGCAGTGTCTAAATTCAATGTATATTAAGTCTGTGGTT
TTTCTCCCTCCTAAAAGTATTACAAACCTTAAAAAAATATTTTTATAATTGTTTGAATAT
CCGATGAATGAGGATTTATAAAATTTATAATTTTTTTGTCCATTTATAAATACTGATTTT
TTTTTCTTAAAACCATTTTTTGGACAAGACAAGATAAGCTGAGTCATATGTTATCACTTG
TCAATTGTTTTTCTTTCTAATTTCTTTGTTTTCTTTGTTCTCTTCAACTTATATATAAAA
TCTTATAATTATTATTAAAACTTTAAGGAAGAGGGAACATATAGAATTAAGAGGGAGGTT
TTTGTGTTATAATTAGTTTTTTTTTATATTTTTTTCAAGAATTTTCTTGAAGGTTAATTA
ATGGCCAAGATTACTAGTTTAATTGGATCTGGAATTGTTGCAGCTACCAACCAGGTTGGT
CCTCACGTAAAGCATATCCCTGCTGTTGGCAATTTGCAAAAACAAATCGTTAGCGATCAA
ATACAGGTCAGATGGAGTAGCACTGAGACATCTTTGAAGAATGACATCTCAGCAACTGAT
GTTAGAGGATACAAGGGGCATGATATGTTGGCACCCTTCACTGCCGGATGGCATTCTACT
GATTTGGAACCTTTAGTCATACAAAAATCCGAGGGTTCGTATGTCTATGATGTTAACGGG
AAGAAGTACCTCGATGCTCTAGCTGGTTTGTGGTGCACATCTTTGGGTGGAAATGAGCCT
CGTCTTGTTGCAGCCGCAACTAAACAACTCAACGAGTTGCCCTTTTACCATTCATTTTGG
AATCGTAGCACAAAACCTTCTTTGGATCTCGCGAAGGAGCTCCTAGATCTTTTTACTGCA
AATAAAATGGCGAAAGCTTTTTTCACAAACAGCGGATCAGAAGCCAATGACACACAGGTG
AAACTGGTATGGTATTACAACAATGCACTCGGGAGGCCAGACAAAAAGAAATTTATTGCT
CGAACAAAATCATACCACGGATCAACTCTCATTTCCGCTAGTCTCTCTGGTCTTCCTGCA
CTACATCAGCAATTCGATCTACCAGCTCCGTTTGTTCTGCATACTGACTGCCCTCATTTT
TGGCGCTTTCATCAGCCAGGTGAGACGGAAGAGGAGTTCTCGACAAGATTGGCTAATAAT
TTGGAAAATCTCATACTCAAAGAGGGACCTGAAACAATAGCTGCTTTCATTGCGGAGCCA
GTCATGGGGGCAGGAGGTGTCATACCTCCTCCCGCGACCTATTTTGAAAAGGTCCAAGCT
ATACTAAAGAAGTACGACATTCTTTTCATCGCGGATGAGGTTATATGTGGATTTGGAAGG
CTCGGGACAATGTTCGGATGTGAAAAGTACAACATTAAACCTGATCTTGTCTCTGTAGCA
AAGGCTCTTTCCTCCGGATATATGCCAATTGGGGCTGTCCTTGTAAGCCCTGAAGTCTCC
GATGTCATATATTCTCAAAGCAACAAGCTCGGTACATTTTCCCATGGATTTACTTACTCG
GGGCACCCTGTCTCGTGTGCAGTTGCCTTGGAAACACTGAAGATCTACAAGGAAAGAAAT
ATTATTGAGCAAGTAAACAGAATATCACCAAAGTTCCAAGAAGGTCTGAAGGCGTTTTCT
GATAGTCCCATAATCGGAGAGATAAGGGGAACTGGTTTGCTACATGGTACAGAGTTTACA
GATAACAAATCTCCAAATGATCCATTCCCTCCTGAATGGGGTATCGGTGCATATTTTGGA
GCACGGTGTGAGAAGCATGGAGTGTTGGTACGCGTTGCTGGTGATAACATAATGATGTCT
CCTCCCTACATTCTTAGTTTGGAAGAAATTGATGAGTTGATAATCAAATATGGGAAAGCA
TTGAAGGATACTGAAAATAGAGTAGAAGAACTCAAGTCTCAGAAGAAGTAAAAAAGCTCA
TGAGGAAAAAAAGAGTGAAAAAAATACAAGTCAAAATTGTTTTGTATATTGTTAACTAGG
CTTATGTGTTGTTGGCTAACAAAGTCATTTGACTTTCTAGTAACTCGCAATAGGCGTTTG
ATTATTTTAATTATATATTTTTTTAAAAAAGTTTTGGATGAATATGAAAATAAACTTGAA
AATCAAGAAGTATGATTGATTAAATCATGCTAAGATAAGTTTAAGTTGAATTATGATCGA
TTGTTTAGCCTAAATCTATTTCAATCCAATCAAATTTTAAGCCTA