Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g005940.2.1
CDS Infomation

1-aminocyclopropane-1-carboxylate oxidase 1 (AHRD V3.3 *** ACCO1_SOLLC)
Sequence

ATGGAGAATTTCCCAATTATCAACTTGGAAAAACTCAATGGTGCTGAGAGAGTAGCCACA
ATGGAAAAGATTAATGATGCTTGTGAAAATTGGGGCTTCTTTGAGTTGGTGAACCATGGA
ATTCCACATGAAGTGATGGACACTGTGGAGAAATTAACAAAGGGACATTACAAGAAGTGT
ATGGAACAAAGATTTAAAGAATTGGTTGCTAAGAAAGGACTTGAAGGTGTTGAAGTTGAG
GTTACTGATATGGATTGGGAAAGTACTTTTTTCTTGAGGCATCTCCCTTCTTCTAATATC
TCTCAACTACCTGATCTTGATGATGTATATAGGGAAGTTATGAGGGATTTTGCTAAAAGA
TTAGAGAAGTTAGCAGAAGAACTCTTGGATTTGCTTTGTGAAAACCTTGGACTAGAAAAA
AGTTACTTGAAAAATACATTTTATGGCTCAAAAGGTCCAAATTTTGGGACTAAAGTAAGT
AACTATCCACCATGTCCAAAACCTGATCTAATAAAGGGGTTGCGTGCACATACTGATGCT
GGTGGCATAATACTTCTCTTCCAAGATGACAAGGTGAGTGGCCTACAACTCCTCAAAGAC
GGTCGATGGATCGATGTTCCTCCCATGCGCCACTCCATCGTGGTTAACCTAGGTGACCAA
CTCGAGGTAATCACGAACGGGAAGTACAAGAGTGTGATGCATAGAGTGATCGCACAAAAA
GACGGGACTCGGATGTCATTAGCATCCTTCTACAATCCAGGAAATGATGCATTGATCTAT
CCAGCACCAGCTCTAGTTGATAAAGAGGCAGAGGAACATAACAAACAAGTTTACCCTAAA
TTTATGTTTGATGATTACATGAAATTATATGCTAATCTCAAATTTCAAGCCAAAGAGCCA
AGATTTGAAGCCATGAAAGCTATGGAAAGTGATCCAATTGCAATTGCTTAG

Peptide Sequence

PEP ID

Solyc12g005940.2.1
PEP Infomation

1-aminocyclopropane-1-carboxylate oxidase 1 (AHRD V3.3 *** ACCO1_SOLLC)
Sequence

MENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKC
MEQRFKELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFAKR
LEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA
GGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK
DGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAKEP
RFEAMKAMESDPIAIA*

Transcript Sequence

Transcript ID

Solyc12g005940.2.1
Transcript Infomation

1-aminocyclopropane-1-carboxylate oxidase 1 (AHRD V3.3 *** ACCO1_SOLLC)
Sequence

ACACACCAAAAAAAGAAAACTCACTTTCAATATCTTCCATCTTTTTATTCCACACACTAT
TTACTCTAAAAAAGAAAAAAAAAACATTTTCTTCTATTTCTTCAAGAAATTAAAAATGGA
GAATTTCCCAATTATCAACTTGGAAAAACTCAATGGTGCTGAGAGAGTAGCCACAATGGA
AAAGATTAATGATGCTTGTGAAAATTGGGGCTTCTTTGAGTTGGTGAACCATGGAATTCC
ACATGAAGTGATGGACACTGTGGAGAAATTAACAAAGGGACATTACAAGAAGTGTATGGA
ACAAAGATTTAAAGAATTGGTTGCTAAGAAAGGACTTGAAGGTGTTGAAGTTGAGGTTAC
TGATATGGATTGGGAAAGTACTTTTTTCTTGAGGCATCTCCCTTCTTCTAATATCTCTCA
ACTACCTGATCTTGATGATGTATATAGGGAAGTTATGAGGGATTTTGCTAAAAGATTAGA
GAAGTTAGCAGAAGAACTCTTGGATTTGCTTTGTGAAAACCTTGGACTAGAAAAAAGTTA
CTTGAAAAATACATTTTATGGCTCAAAAGGTCCAAATTTTGGGACTAAAGTAAGTAACTA
TCCACCATGTCCAAAACCTGATCTAATAAAGGGGTTGCGTGCACATACTGATGCTGGTGG
CATAATACTTCTCTTCCAAGATGACAAGGTGAGTGGCCTACAACTCCTCAAAGACGGTCG
ATGGATCGATGTTCCTCCCATGCGCCACTCCATCGTGGTTAACCTAGGTGACCAACTCGA
GGTAATCACGAACGGGAAGTACAAGAGTGTGATGCATAGAGTGATCGCACAAAAAGACGG
GACTCGGATGTCATTAGCATCCTTCTACAATCCAGGAAATGATGCATTGATCTATCCAGC
ACCAGCTCTAGTTGATAAAGAGGCAGAGGAACATAACAAACAAGTTTACCCTAAATTTAT
GTTTGATGATTACATGAAATTATATGCTAATCTCAAATTTCAAGCCAAAGAGCCAAGATT
TGAAGCCATGAAAGCTATGGAAAGTGATCCAATTGCAATTGCTTAGATTAAAAATTAAAA
AAATTGGAAGAAAAATTATTTGTTATTGACATACATTATTTGTATTTTTTTTTGAAGTAT
AGTGGAATTTATATATTTTTATTACAAAGTGTGCGTCCCTACTACATGT