Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g005920.2.1
CDS Infomation	Fimbrin-like family protein (AHRD V3.3 *** B9I148_POPTR)
Sequence	ATGTCTAGTTTTGTTGGTGTTGTTGTCTCTGATCAATGGCTACAGAGTCAATTCACTCAA GTCGAGCTGCGCGGCCTCAATTCCAACTTCCTATCTGCAAGGAATCAATCCGGGAAGGTC ACTTTGGGAGATCTACCACCTATGTTATGCAAACTTAAGGCCTTCAAAGATATACTAAAT GAGGATGATATTAAGGCAATATTTAGCGAGTCATCATCTGATATGAGTGAAGAAATTGAT TTTGAATCGTTCCTTCGGGCATATCTAAATCTACAAGCACGGGCTACAGCGAAAGGTGAT TCAAAGACCAGCTCCTCTTTCCTCAAGGCAACTACAACCACACTCCGACACACCATTAGT GAATCTGAAAGGGGCTCATATGTAGCTCACATCAACAGCTTTCTCAGAGACGATCCGTTT TTGAAGGATTTCCTACCGATAGATCCATCTACCAATCAACTCTTTGATCTTGCCAAAGAT GGTGTTCTTCTTTGTAAGCTCATAAATATTGCTGTCCCCGGAACAATAGATGAACGTGCT ATCAATACCAAAAAGGTTCTTAATCCATGGGAAAGGAATGAGAACCACACCCTTTGCCTC AATTCCGCTAAGGCCATTGGTTGTACTGTGGTCAATATTGGAACACAGGATTTAATCGAA GCAAGACCTCATCTGGTTGTCGGGTTGATTTCTCAAATAATCAAGATACAATTATTAGCT GATCTCAATCTGAGAAAAACTCCACAACTTGTGGAACTTGTGGAAGATAGTCAGGAAGTA GAGGAGCTTATGAGCTTATCTCCAGAAAAAGTCTTACTGAAATGGATGAATTTCCATCTT AAAAAAGCAGGTTACAAGAAAGAGGTTACAAATTTCTCAAGTGACTTAAAGGACGGAGAA GCTTATGCTCATTTGCTCAATACTCTCGCGCCTGAACATGGTACGACCAGCACATTAGAT ACAGAAGATCCAACTGAAAGAGCAAACTTGATTCTTGAGCAAGCAGAAAAACTAGATTGC AAAAGATATGTAACTCCAAAGGACATTGTTGAGGGCTCAGCGAACCTAAATCTTGCATTC GTTGCACAAATATTTCAACACAGGAATGGATTGACAGCAGATACCACAAAGTTGTCTTTT GCTGTGATGATGGAGGATGATGCTCAAACTTCTCGAGAAGAAAGATGCTTTCGGTTGTGG ATTAACAGTCTTGGAACTGATACTTATGTGAATAATTTATTTGAGGACGTGAGAACCGGA TGGGTTCTTTTAGAGGTACTGGACAAAATTTCACAAGGATTAGTTAATTGGAAACAAGCA ACAAAGCCTCCAATTAAGATGCCATTTCGAAAAGTTGAGAATTGCAATCAAGTCATAAGC ATTGGGAAAGAACTGAATTTCTCCCTCGTAAATGTAGCTGGAAGTGATATTGTACAAGGA AACAAGAAGCTCATACTAGCTTTTTTGTGGCAGTTAATGAGGTTTTCAATGCTCCAATTG TTGATAAACTTGAAATTTCATGCCCTTGGAAAGGAGATAACAGATGCTGACATACTAAAT TGGGCAAACAGTAAAGTGAAGAGTGTAGGGAGAAAATCTCAAATTGAAAGCTTTAAGGAC AAAAGTATATCAAGTGGGAAATTCTTTCTCGAGCTTCTAAGTGCTGTGGAGCCAAGGGTC GTAAATTGGAGCCTTGTCACCAAGGGTAGAACTGATGAGGATAAGAAGCTTAATGCAAAT TATACAATCAGTGTAGCTCGTAAACTCGGGTGCTCCATCTTTTTATTGCCTGAGGATATA ATAGAGGTGAACCAGAAGATGATGCTGACACTCACAGCAAGCATCATGTATTGGAGCTTG CAAACAAAGACTGAAGATTCAGAGTCCAACACTGCAGAAAACGCCAGTTCGGAGGCATCT CCAGCAGCAGCCTCTGATGGTGACATTGCTTCCACAACTTCTGAAGTGGAAAAGGAGGTG CAAGAAGAAAGATAA

Peptide Sequence

PEP ID	Solyc12g005920.2.1
PEP Infomation	Fimbrin-like family protein (AHRD V3.3 *** B9I148_POPTR)
Sequence	MSSFVGVVVSDQWLQSQFTQVELRGLNSNFLSARNQSGKVTLGDLPPMLCKLKAFKDILN EDDIKAIFSESSSDMSEEIDFESFLRAYLNLQARATAKGDSKTSSSFLKATTTTLRHTIS ESERGSYVAHINSFLRDDPFLKDFLPIDPSTNQLFDLAKDGVLLCKLINIAVPGTIDERA INTKKVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLIEARPHLVVGLISQIIKIQLLA DLNLRKTPQLVELVEDSQEVEELMSLSPEKVLLKWMNFHLKKAGYKKEVTNFSSDLKDGE AYAHLLNTLAPEHGTTSTLDTEDPTERANLILEQAEKLDCKRYVTPKDIVEGSANLNLAF VAQIFQHRNGLTADTTKLSFAVMMEDDAQTSREERCFRLWINSLGTDTYVNNLFEDVRTG WVLLEVLDKISQGLVNWKQATKPPIKMPFRKVENCNQVISIGKELNFSLVNVAGSDIVQG NKKLILAFLWQLMRFSMLQLLINLKFHALGKEITDADILNWANSKVKSVGRKSQIESFKD KSISSGKFFLELLSAVEPRVVNWSLVTKGRTDEDKKLNANYTISVARKLGCSIFLLPEDI IEVNQKMMLTLTASIMYWSLQTKTEDSESNTAENASSEASPAAASDGDIASTTSEVEKEV QEER*

Transcript Sequence

Transcript ID	Solyc12g005920.2.1
Transcript Infomation	Fimbrin-like family protein (AHRD V3.3 *** B9I148_POPTR)
Sequence	ATGTCTAGTTTTGTTGGTGTTGTTGTCTCTGATCAATGGCTACAGAGTCAATTCACTCAA GTCGAGCTGCGCGGCCTCAATTCCAACTTCCTATCTGCAAGGAATCAATCCGGGAAGGTC ACTTTGGGAGATCTACCACCTATGTTATGCAAACTTAAGGCCTTCAAAGATATACTAAAT GAGGATGATATTAAGGCAATATTTAGCGAGTCATCATCTGATATGAGTGAAGAAATTGAT TTTGAATCGTTCCTTCGGGCATATCTAAATCTACAAGCACGGGCTACAGCGAAAGGTGAT TCAAAGACCAGCTCCTCTTTCCTCAAGGCAACTACAACCACACTCCGACACACCATTAGT GAATCTGAAAGGGGCTCATATGTAGCTCACATCAACAGCTTTCTCAGAGACGATCCGTTT TTGAAGGATTTCCTACCGATAGATCCATCTACCAATCAACTCTTTGATCTTGCCAAAGAT GGTGTTCTTCTTTGTAAGCTCATAAATATTGCTGTCCCCGGAACAATAGATGAACGTGCT ATCAATACCAAAAAGGTTCTTAATCCATGGGAAAGGAATGAGAACCACACCCTTTGCCTC AATTCCGCTAAGGCCATTGGTTGTACTGTGGTCAATATTGGAACACAGGATTTAATCGAA GCAAGACCTCATCTGGTTGTCGGGTTGATTTCTCAAATAATCAAGATACAATTATTAGCT GATCTCAATCTGAGAAAAACTCCACAACTTGTGGAACTTGTGGAAGATAGTCAGGAAGTA GAGGAGCTTATGAGCTTATCTCCAGAAAAAGTCTTACTGAAATGGATGAATTTCCATCTT AAAAAAGCAGGTTACAAGAAAGAGGTTACAAATTTCTCAAGTGACTTAAAGGACGGAGAA GCTTATGCTCATTTGCTCAATACTCTCGCGCCTGAACATGGTACGACCAGCACATTAGAT ACAGAAGATCCAACTGAAAGAGCAAACTTGATTCTTGAGCAAGCAGAAAAACTAGATTGC AAAAGATATGTAACTCCAAAGGACATTGTTGAGGGCTCAGCGAACCTAAATCTTGCATTC GTTGCACAAATATTTCAACACAGGAATGGATTGACAGCAGATACCACAAAGTTGTCTTTT GCTGTGATGATGGAGGATGATGCTCAAACTTCTCGAGAAGAAAGATGCTTTCGGTTGTGG ATTAACAGTCTTGGAACTGATACTTATGTGAATAATTTATTTGAGGACGTGAGAACCGGA TGGGTTCTTTTAGAGGTACTGGACAAAATTTCACAAGGATTAGTTAATTGGAAACAAGCA ACAAAGCCTCCAATTAAGATGCCATTTCGAAAAGTTGAGAATTGCAATCAAGTCATAAGC ATTGGGAAAGAACTGAATTTCTCCCTCGTAAATGTAGCTGGAAGTGATATTGTACAAGGA AACAAGAAGCTCATACTAGCTTTTTTGTGGCAGTTAATGAGGTTTTCAATGCTCCAATTG TTGATAAACTTGAAATTTCATGCCCTTGGAAAGGAGATAACAGATGCTGACATACTAAAT TGGGCAAACAGTAAAGTGAAGAGTGTAGGGAGAAAATCTCAAATTGAAAGCTTTAAGGAC AAAAGTATATCAAGTGGGAAATTCTTTCTCGAGCTTCTAAGTGCTGTGGAGCCAAGGGTC GTAAATTGGAGCCTTGTCACCAAGGGTAGAACTGATGAGGATAAGAAGCTTAATGCAAAT TATACAATCAGTGTAGCTCGTAAACTCGGGTGCTCCATCTTTTTATTGCCTGAGGATATA ATAGAGGTGAACCAGAAGATGATGCTGACACTCACAGCAAGCATCATGTATTGGAGCTTG CAAACAAAGACTGAAGATTCAGAGTCCAACACTGCAGAAAACGCCAGTTCGGAGGCATCT CCAGCAGCAGCCTCTGATGGTGACATTGCTTCCACAACTTCTGAAGTGGAAAAGGAGGTG CAAGAAGAAAGATAAATTTTGAAGAAAAGAAATATATACAAAAAAGGTTCTTTCTGATGT TGTCCTCAGTTTTGCTTTCAAGAGGACATGTCAAGTGAAGTTGGTTAGTAGGACAGTTCC TCCTTTTCTTTTCTTTTTCTAGTAACCATCTTGTATCCGGTGTTCACTTGTCCGACTAAT TCAGATTCTGCCCCCGTAAGAGGCCTATTAAGGAGGGAGAGAGCTCCCTCTCTACCTTAT TTGGGGTTTTCTGGTAAAGGGTCGAGGGATTCTTTCCGTCCCACTACAACTCATGATAGT TACATGAAGCACAGTAGTACGTTAATGCATTCTTTTGAAG