Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g005830.2.1
CDS Infomation

Homeobox-leucine zipper family protein (AHRD V3.3 *** B9GU68_POPTR)
Sequence

ATGGATAATCAACCTAATTCAATGGAAAATCGAAAGCGCTATCATCGCCACACTCAACAT
CAGATCCAGGAATTGGAAGCGTACTTTAAGGATTGTCCCCACCCAGATGACAAGCAAAGG
AAGGAGCTGAGTCGCGAGTTAGGGTTGGAGCCCCTGCAGGTCAAGTTTTGGTTCCAGAAC
AAGAGGACTCAAATGAAGAATCAACTTGAGAGGCACGAGAACACACATCTTCGCATTGAA
ATTGAGAGGATGAAGTCAGAAATGCTGAGGCTCAAAGAAGCTTTGGGCAATCTATCTTGC
CCTACTTGTGGTGGCCATCGTATCAACATTGGTGATTTGTCTTTTGAAGAACGCCAATTA
AGGAGCGAAAATGCAAGACTCAAAGAAGAGATCGAACGTATCTCATCTATGGCTGGAAGA
GTTGTTGGAAAATCTGTATTTCCAAACAACAACAATGGTTACATCTCTGCTCCTCCTGTT
GATTTTGGAGTTCTTCCTGCTTACTCGATGCCACAACGCGTCGATGGAAATGGTGGATTT
GAGGATGTTCCAATTATGAGTCCAATGATTATTCCACCAATTAGTGAAATTGAAAAGCCC
TTTATCATTGAGCTTGTTATGTCAGCTATGGATGAATTTGTTCAAATGGCATATATACAA
GAACCACTTTGGTCCCCTAGCATTGAAAATGCAGCATTTATGCTAAATGAAGATGAGTAT
TTTAGGGTTTTTCCTAGGGGAATTGGACCTAGACCTATTGGATTTGTTACTGAGGCTACA
AGGGATAGTTCTATTGTCATAATGAACAAGCTTGACCTAGTTCAAATTCTCATGAATGTG
AATCATTGGGCCAGTATTTTCTCTGGTATTGTCTCAAGGGCTTCATGTGTTGATGTGATA
TCAACTGGAGGTGCTGGAAATCCCAATGGAGTAATACAAGTGATACTAGCTGAAACTCAA
GTTGCATCTCCACAAGTTCCAACTAGGGAATTCTACTTTGCTAGGTATTGCAAGCTCAGA
GTTGATGGAACATGGGCAATTGTCGATGTTTCATTGGACCAGTTACGCGCTGGTCCAGCT
CTTAGGTCTCGAAAAAGGCCATCTGGATGCCTTATTGAAGATGCACCAAATGGATGCTCT
AAGGTTACTTGGGTTGAGCATGTTGAAGTTGATGCTTCAACAGTGCATACTATTTACAAG
CCACTAGTGAGTTCTGGTCTTGCATTTGGTGCGAAGCGTTGGCTCGCTGCTCTTGATCGA
CAGTGTGACCGTATTGCAAGTGTTCTGGTCACACCTACTCTAAACAATGATGACATGCTG
CTAACAACTGAGGAGAGTAGAAAAAATGTGTTGAAATTGGCTGAGAGAATGATTAATTGC
TTTAGCTCTGGAGTGAGTGCAACTGTAGGTAATCAATGGACAACTGTGTCAGCAGGAAAT
GGCACTGATGAAAATGTTAGAATTATGACTAGGAAAACTGTTGGTGATCCTAGTAGACCA
CCTGGTATTGTCCTAAGTGCTGCTACTTCATTCTGGCTCCCTATTGCTCCGAAAACCGTG
TTCGATTACCTCCGTAATGAGAACACGCGTATCGAGTGGGACATTCTGTCCAATGGAAGT
CCACTCCAAGAAATTGTTCAGATTGCTAATGGCACTCAGACAGGCAACTGTGTCTCTTTA
CTAAGGATGATTGGTGAGAATGATAACCAGAGCAACATTGTGATTCTCCAAGAGAATAGC
ACTGATCCAACAGGATCCTATGTGATCTATGCACCAGTTGAGATCTGCACAATGAACACT
ATTTTGAATGGTGGAGATCCAGAACATGTTTCTCTGCTGCCTTCTGGTTTCGCAATTCTC
CCCGATGGTCCACCAGGAGTTAGGGGAACTTATAATCATGGCTCTGGTGGATCTTTGCTC
ACCGTCGCGTTTCAGATTCTGGTTGAGTTCGTCCCTGTTGCTAACATCTCATTGGGATCT
GTTGCTACCGTCAACAATTTGATTGCTTGCACTATTGAAAGGATCAAGGCTGCTCTCTTA
CCTCAGCCAACTTGA

Peptide Sequence

PEP ID

Solyc12g005830.2.1
PEP Infomation

Homeobox-leucine zipper family protein (AHRD V3.3 *** B9GU68_POPTR)
Sequence

MDNQPNSMENRKRYHRHTQHQIQELEAYFKDCPHPDDKQRKELSRELGLEPLQVKFWFQN
KRTQMKNQLERHENTHLRIEIERMKSEMLRLKEALGNLSCPTCGGHRINIGDLSFEERQL
RSENARLKEEIERISSMAGRVVGKSVFPNNNNGYISAPPVDFGVLPAYSMPQRVDGNGGF
EDVPIMSPMIIPPISEIEKPFIIELVMSAMDEFVQMAYIQEPLWSPSIENAAFMLNEDEY
FRVFPRGIGPRPIGFVTEATRDSSIVIMNKLDLVQILMNVNHWASIFSGIVSRASCVDVI
STGGAGNPNGVIQVILAETQVASPQVPTREFYFARYCKLRVDGTWAIVDVSLDQLRAGPA
LRSRKRPSGCLIEDAPNGCSKVTWVEHVEVDASTVHTIYKPLVSSGLAFGAKRWLAALDR
QCDRIASVLVTPTLNNDDMLLTTEESRKNVLKLAERMINCFSSGVSATVGNQWTTVSAGN
GTDENVRIMTRKTVGDPSRPPGIVLSAATSFWLPIAPKTVFDYLRNENTRIEWDILSNGS
PLQEIVQIANGTQTGNCVSLLRMIGENDNQSNIVILQENSTDPTGSYVIYAPVEICTMNT
ILNGGDPEHVSLLPSGFAILPDGPPGVRGTYNHGSGGSLLTVAFQILVEFVPVANISLGS
VATVNNLIACTIERIKAALLPQPT*

Transcript Sequence

Transcript ID

Solyc12g005830.2.1
Transcript Infomation

Homeobox-leucine zipper family protein (AHRD V3.3 *** B9GU68_POPTR)
Sequence

ATGGATAATCAACCTAATTCAATGGAAAATCGAAAGCGCTATCATCGCCACACTCAACAT
CAGATCCAGGAATTGGAAGCGTACTTTAAGGATTGTCCCCACCCAGATGACAAGCAAAGG
AAGGAGCTGAGTCGCGAGTTAGGGTTGGAGCCCCTGCAGGTCAAGTTTTGGTTCCAGAAC
AAGAGGACTCAAATGAAGAATCAACTTGAGAGGCACGAGAACACACATCTTCGCATTGAA
ATTGAGAGGATGAAGTCAGAAATGCTGAGGCTCAAAGAAGCTTTGGGCAATCTATCTTGC
CCTACTTGTGGTGGCCATCGTATCAACATTGGTGATTTGTCTTTTGAAGAACGCCAATTA
AGGAGCGAAAATGCAAGACTCAAAGAAGAGATCGAACGTATCTCATCTATGGCTGGAAGA
GTTGTTGGAAAATCTGTATTTCCAAACAACAACAATGGTTACATCTCTGCTCCTCCTGTT
GATTTTGGAGTTCTTCCTGCTTACTCGATGCCACAACGCGTCGATGGAAATGGTGGATTT
GAGGATGTTCCAATTATGAGTCCAATGATTATTCCACCAATTAGTGAAATTGAAAAGCCC
TTTATCATTGAGCTTGTTATGTCAGCTATGGATGAATTTGTTCAAATGGCATATATACAA
GAACCACTTTGGTCCCCTAGCATTGAAAATGCAGCATTTATGCTAAATGAAGATGAGTAT
TTTAGGGTTTTTCCTAGGGGAATTGGACCTAGACCTATTGGATTTGTTACTGAGGCTACA
AGGGATAGTTCTATTGTCATAATGAACAAGCTTGACCTAGTTCAAATTCTCATGAATGTG
AATCATTGGGCCAGTATTTTCTCTGGTATTGTCTCAAGGGCTTCATGTGTTGATGTGATA
TCAACTGGAGGTGCTGGAAATCCCAATGGAGTAATACAAGTGATACTAGCTGAAACTCAA
GTTGCATCTCCACAAGTTCCAACTAGGGAATTCTACTTTGCTAGGTATTGCAAGCTCAGA
GTTGATGGAACATGGGCAATTGTCGATGTTTCATTGGACCAGTTACGCGCTGGTCCAGCT
CTTAGGTCTCGAAAAAGGCCATCTGGATGCCTTATTGAAGATGCACCAAATGGATGCTCT
AAGGTTACTTGGGTTGAGCATGTTGAAGTTGATGCTTCAACAGTGCATACTATTTACAAG
CCACTAGTGAGTTCTGGTCTTGCATTTGGTGCGAAGCGTTGGCTCGCTGCTCTTGATCGA
CAGTGTGACCGTATTGCAAGTGTTCTGGTCACACCTACTCTAAACAATGATGACATGCTG
CTAACAACTGAGGAGAGTAGAAAAAATGTGTTGAAATTGGCTGAGAGAATGATTAATTGC
TTTAGCTCTGGAGTGAGTGCAACTGTAGGTAATCAATGGACAACTGTGTCAGCAGGAAAT
GGCACTGATGAAAATGTTAGAATTATGACTAGGAAAACTGTTGGTGATCCTAGTAGACCA
CCTGGTATTGTCCTAAGTGCTGCTACTTCATTCTGGCTCCCTATTGCTCCGAAAACCGTG
TTCGATTACCTCCGTAATGAGAACACGCGTATCGAGTGGGACATTCTGTCCAATGGAAGT
CCACTCCAAGAAATTGTTCAGATTGCTAATGGCACTCAGACAGGCAACTGTGTCTCTTTA
CTAAGGATGATTGGTGAGAATGATAACCAGAGCAACATTGTGATTCTCCAAGAGAATAGC
ACTGATCCAACAGGATCCTATGTGATCTATGCACCAGTTGAGATCTGCACAATGAACACT
ATTTTGAATGGTGGAGATCCAGAACATGTTTCTCTGCTGCCTTCTGGTTTCGCAATTCTC
CCCGATGGTCCACCAGGAGTTAGGGGAACTTATAATCATGGCTCTGGTGGATCTTTGCTC
ACCGTCGCGTTTCAGATTCTGGTTGAGTTCGTCCCTGTTGCTAACATCTCATTGGGATCT
GTTGCTACCGTCAACAATTTGATTGCTTGCACTATTGAAAGGATCAAGGCTGCTCTCTTA
CCTCAGCCAACTTGATCGCGTTTCCTGATAGGGTGATAATAAGGAATAAAGAAGAAGTCA
AGAGCGCACCTTTCAACTTTCTATTACAAGAAGAAATATTTTATTTTTTTTTGTTTTAGG
GTAAAGAGGTTCGTGAAATGACTTCTTGTGGCAATATTCCATAGATAGGAAGAAATAATA
ATAAAAAAACTATATAATAGAATAATAGGGATTACCCTTTTGATGTTATGTGACTTATTA
TAAGTCCATCAAAACATTGTAGCAATTGGCAGATTGTTTTGTCTGTCTTTTGCAGTATTA
TGGTATGAAATAAAAAAAAGTTTGAACTTCATGTGGTTTTCA