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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g005820.2.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 --* AT1G27660.1)
Sequence

ATGTGCCCCCTTTTTTCTTTTCCTTCCTATTTTCCTCAATATATATATACTATATAATAT
ATCCCCTCAAACAATATAATATCAACTCTATTTCACAAAACACATATTCCAATTTCCAAC
CTCAAAAAAAAAAAAATGAACCAAAGTGAAAATAATTTATCATCAACAAATGAAGATGAA
CAACAAGAAGAAAGTGGATGGACAACTTATTTGGAGGATTTTTCATTAATGAATAATCAA
AGGGATTATGATGATGATAATGATGATTTTAGCCCTAATAGTTATTCTTTATTATCTGAT
GCTGCTTCTAATATTGCTCCATGGAATAACAATAATTATTGTAATATAAATTACAACAAA
TTAGTTATGAATGATGAATACTCTCCAAAGAAGTTGAATTTGAAGAAATTACCAAGAAAC
AAGAAAATCAATGATCCTGATTTGGAAGACACTGCTAGCTCACCTGTCAATAGTCCTAAG
GTAAGCAAGATGGAGATCAATTACAGAAGAACAAAAAATAGCACTGGAAATTTTATGGGG
AATGAAGGTAGCTCAAAACAATTTCAAGAAGTGCACAAAGTGGAAAGAGGCTATACAGAT
TTGAAGAAGAAAGGACTTTGTCTTGTGCCTTTATCTATGTTAGTCAACTACCATGGTTGA

Peptide Sequence

PEP ID

Solyc12g005820.2.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 --* AT1G27660.1)
Sequence

MCPLFSFPSYFPQYIYTI*YIPSNNIISTLFHKTHIPISNLKKKKMNQSENNLSSTNEDE
QQEESGWTTYLEDFSLMNNQRDYDDDNDDFSPNSYSLLSDAASNIAPWNNNNYCNINYNK
LVMNDEYSPKKLNLKKLPRNKKINDPDLEDTASSPVNSPKVSKMEINYRRTKNSTGNFMG
NEGSSKQFQEVHKVERGYTDLKKKGLCLVPLSMLVNYHG*

Transcript Sequence

Transcript ID

Solyc12g005820.2.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 --* AT1G27660.1)
Sequence

TAACTATTTAAATGATACAATTGTATTTTAATTAACTTCCTTCACCTGCCCCCTCACCAA
GATTCCATGTGCCCCCTTTTTTCTTTTCCTTCCTATTTTCCTCAATATATATATACTATA
TAATATATCCCCTCAAACAATATAATATCAACTCTATTTCACAAAACACATATTCCAATT
TCCAACCTCAAAAAAAAAAAAATGAACCAAAGTGAAAATAATTTATCATCAACAAATGAA
GATGAACAACAAGAAGAAAGTGGATGGACAACTTATTTGGAGGATTTTTCATTAATGAAT
AATCAAAGGGATTATGATGATGATAATGATGATTTTAGCCCTAATAGTTATTCTTTATTA
TCTGATGCTGCTTCTAATATTGCTCCATGGAATAACAATAATTATTGTAATATAAATTAC
AACAAATTAGTTATGAATGATGAATACTCTCCAAAGAAGTTGAATTTGAAGAAATTACCA
AGAAACAAGAAAATCAATGATCCTGATTTGGAAGACACTGCTAGCTCACCTGTCAATAGT
CCTAAGGTAAGCAAGATGGAGATCAATTACAGAAGAACAAAAAATAGCACTGGAAATTTT
ATGGGGAATGAAGGTAGCTCAAAACAATTTCAAGAAGTGCACAAAGTGGAAAGAGGCTAT
ACAGATTTGAAGAAGAAAGGACTTTGTCTTGTGCCTTTATCTATGTTAGTCAACTACCAT
GGTTGATTTTTCCTCTCTTTTATTCCTCTCCATGTAAATAAATATTTGCTTTTATTTTTT
AAAGTATATAAAAGATCATTATGTAAATATCGAAGTTTCACTTCGT