Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g005660.2.1
CDS Infomation	Zinc finger, B-box (AHRD V3.3 - A0A103Y7X2_CYNCS)
Sequence	ATGAAGAATTGTGAGCTTTGTAATGGATTAGCTAGGATTTACTGTGAATCTGACCACGCG AATTTGTGTTGGGATTGTGATTTGAAGGTGCATTCAGCGAACTTTTTGGTAGCAAAACAT TCCAGGTCGTTGCTATGTAACGTGTGTCGATCGCCGACGGTTTGGTCAGCTAGCGGTGCG AAAATTGGCCGGACGGTATCTGTATGTGAGAGATGCGTGAATGATGAAGAAACTGACAGA GAAGAGGAAGAGAAGGAGGAAATTGATTTGGAAGATATTCAAGTTGTTCCGTGGTCATCA ACTCCGCCTCCACAGCCGGAGAGTTCGTCCAGTAGCAGCGATGAATCGTTAACTGATTTT TTTTCTTTGAAGCGAATGCGAAAAGATGATGATAGTGGAACTTTAACGTCACATCGGGAA GTTAATATGCTCTCGCCGGCGACGGAGGATCATGGCGGTGACGAAGCAGCTGAGTTTGTA AAGTCATTTCCGGTGAAAATGCCTTCAAAGATCCAGAGAACCGGTGAGATTCTATCGGGT CGGGTTGAAAATATTGGATGTTCAGCGACGGTGGAGCTTATCGGAAGAATTAATCGGGGA GGTGGATAG

Peptide Sequence

PEP ID	Solyc12g005660.2.1
PEP Infomation	Zinc finger, B-box (AHRD V3.3 - A0A103Y7X2_CYNCS)
Sequence	MKNCELCNGLARIYCESDHANLCWDCDLKVHSANFLVAKHSRSLLCNVCRSPTVWSASGA KIGRTVSVCERCVNDEETDREEEEKEEIDLEDIQVVPWSSTPPPQPESSSSSSDESLTDF FSLKRMRKDDDSGTLTSHREVNMLSPATEDHGGDEAAEFVKSFPVKMPSKIQRTGEILSG RVENIGCSATVELIGRINRGGG*

Transcript Sequence

Transcript ID	Solyc12g005660.2.1
Transcript Infomation	Zinc finger, B-box (AHRD V3.3 - A0A103Y7X2_CYNCS)
Sequence	CATATAGTAAAACTTACATGAACATTCAACAAGACAATACACTACTTATAAGTTATAACT ACTAACATTTTATCATAATACATACCCTCCTCATACTACTATCTAATATCATATTTTTCG ATAAACTAAATGTCTAATCACCTTTTTACTAAACTTCTTCGATATATTATAATCAACCTC TCACGCCAATTCGAGCACAGTAGTCAAATGATATTCCCATGGGCCCAACAAACTCCCACC ATTAGTTAGTAGTTCACGTGGCCCACGGGCCTTTTAAACTAGGCCCAGATAAATCCACGT CAGCAAATCAGATTCTCCCTCAGCCTAATTCTGCCACGTCATACCCCAAAACAAAAATAT CCTCTTGTATCAACCACAGGAAACAGCTGCCTACTGAAACTGTGTCGTTTCGGTATCCAT TTCTAAAGTCTCTTTACATTAATACCCCTCTAACCCAACTACATCGATACTAAAATATGC CGTGGTATTTTTGTTGTTATATTCAAAGTTGAGGTTGTTTCAGTTATACACTGCAAGTTG GCCTCTCTTTTTTCTCATCTTCTTCTCTTTCCGAACAGATTACTCCAAAATTCGTTTTCG ATTTTCTCTCTGGAAGAATTTTTTTTTGTGCTAGAGAAGTTTCTAGAAAGTTTAACGATG AAGAATTGTGAGCTTTGTAATGGATTAGCTAGGATTTACTGTGAATCTGACCACGCGAAT TTGTGTTGGGATTGTGATTTGAAGGTGCATTCAGCGAACTTTTTGGTAGCAAAACATTCC AGGTCGTTGCTATGTAACGTGTGTCGATCGCCGACGGTTTGGTCAGCTAGCGGTGCGAAA ATTGGCCGGACGGTATCTGTATGTGAGAGATGCGTGAATGATGAAGAAACTGACAGAGAA GAGGAAGAGAAGGAGGAAATTGATTTGGAAGATATTCAAGTTGTTCCGTGGTCATCAACT CCGCCTCCACAGCCGGAGAGTTCGTCCAGTAGCAGCGATGAATCGTTAACTGATTTTTTT TCTTTGAAGCGAATGCGAAAAGATGATGATAGTGGAACTTTAACGTCACATCGGGAAGTT AATATGCTCTCGCCGGCGACGGAGGATCATGGCGGTGACGAAGCAGCTGAGTTTGTAAAG TCATTTCCGGTGAAAATGCCTTCAAAGATCCAGAGAACCGGTGAGATTCTATCGGGTCGG GTTGAAAATATTGGATGTTCAGCGACGGTGGAGCTTATCGGAAGAATTAATCGGGGAGGT GGATAGCTGAAGTTTGTGGACGGCTAGGATTTAACAGCTGCTAGTCTATAAGCATTTATA GCCGTCAGATTGACTACAAACCACTAATTTGACGATCTGTTTTTTTTTTTTACATGGTGT AGTAGATGAATTATACATCATATGGTTAATTAGGATTAGGATAAGATTTTATTTTTCCAC TCAATTTTATTTTTATGCAGAATTTATATATATAAATATGAGAATGAACAATCTATTGTT TAC