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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g005580.2.1
CDS Infomation

Syntaxin, putative (AHRD V3.3 *** B9S616_RICCO)
Sequence

ATGAATGACTTATTCTCTAATTCGTTTAAAAAGTATCAGGACCTTAAAAAACAGACCGAA
GTAGATGATTTGGAGGGTGGTCAAGATGGCCAACCAGGTACTGAAAGTATTGATCTTGCT
AAATTCTTTGAAGATGTAGAAAATGTGAAAGAAGATATGAAAGATGTCGAAAAATTTCAT
AAGAAATTACAAGAATCAAATGAAGAGAGCAAACTTGTGCATAATGCCAAGACTGTGAAA
GAAATAAGGTCTAGGATGGATTCAGATGTGTCACAGGTCTTAAAACGCGTTAAGATGATC
AAAGGAAAATTGGAAGCCCTCGAACGATCCAATGCAGCTCATAGGAAGATCTCGGGGTGT
GGACCAGGTTCTTCTGCAGATCGAACAAGGACTTCTGTAGTTAGTGGTTTAGGAAAGAAA
TTAAAAGTACTCATGGATGATTTTCAAGGATTGAGGACAAGAATGAATGATGAATATAAG
GAAACAGTTGCAAGAAGGTACTTTACTGTGACAGGAGAGAAAGCTGACGATGGGTTAATT
GAGAATTTGATATCAAGTGGGGAGAGCGAGTCTTTCCTCCAAAAGGCAATCCAGGAACAA
GGTAGGGGTCAGATTATGGACACAATTTCCGAAATACAAGAAAGACATGATGCTGTGAAA
GAGATTGAGAAGAATTTGATTGAGCTACACCAAATATTTTTAGACATGGCTGCATTGGTG
GAAGCACAAGGGCAACAATTAAATGATATTGAAAGTCATGTGGCACATGCAAGTTCCTTT
GTTAGGAGGGGCACAGAGCAATTACAAGAAGCTAGGGAGATTCAAAAAAGTTCAAGAAAG
TGTGCTTGTTTTGCTGTTTTCCTCATCATTTTGCTTATCATTCTTCTTACTTTCCCACTA
TGGTGGCCATTAGTTGCTAGCAAAATATTATAA

Peptide Sequence

PEP ID

Solyc12g005580.2.1
PEP Infomation

Syntaxin, putative (AHRD V3.3 *** B9S616_RICCO)
Sequence

MNDLFSNSFKKYQDLKKQTEVDDLEGGQDGQPGTESIDLAKFFEDVENVKEDMKDVEKFH
KKLQESNEESKLVHNAKTVKEIRSRMDSDVSQVLKRVKMIKGKLEALERSNAAHRKISGC
GPGSSADRTRTSVVSGLGKKLKVLMDDFQGLRTRMNDEYKETVARRYFTVTGEKADDGLI
ENLISSGESESFLQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQIFLDMAALV
EAQGQQLNDIESHVAHASSFVRRGTEQLQEAREIQKSSRKCACFAVFLIILLIILLTFPL
WWPLVASKIL*

Transcript Sequence

Transcript ID

Solyc12g005580.2.1
Transcript Infomation

Syntaxin, putative (AHRD V3.3 *** B9S616_RICCO)
Sequence

GATTTGGATCATTTCTTATCTCTTGATGAAGTCTTTGCTCTTGTCTCCTTCTCTTCTTCT
CCCTCCTCTCATTCATCGTCTCGTTAATGAAGAGAGAAGGTTTAGACAAGGGCGCGACGT
TTTCCCTTTAATAACAATAACAATACCTGTTTTTTCGTTGACTATCAACCTATCACAACC
CTCCTCCGTGGGATAAACAACAATTTATGTTGAGGATAGGTACATAACAAGACTAATTTG
TCCATTGAGAAAAAAAGGAGGGGAAATTGAAAAATCAACCAAAAATGAATGACTTATTCT
CTAATTCGTTTAAAAAGTATCAGGACCTTAAAAAACAGACCGAAGTAGATGATTTGGAGG
GTGGTCAAGATGGCCAACCAGGTACTGAAAGTATTGATCTTGCTAAATTCTTTGAAGATG
TAGAAAATGTGAAAGAAGATATGAAAGATGTCGAAAAATTTCATAAGAAATTACAAGAAT
CAAATGAAGAGAGCAAACTTGTGCATAATGCCAAGACTGTGAAAGAAATAAGGTCTAGGA
TGGATTCAGATGTGTCACAGGTCTTAAAACGCGTTAAGATGATCAAAGGAAAATTGGAAG
CCCTCGAACGATCCAATGCAGCTCATAGGAAGATCTCGGGGTGTGGACCAGGTTCTTCTG
CAGATCGAACAAGGACTTCTGTAGTTAGTGGTTTAGGAAAGAAATTAAAAGTACTCATGG
ATGATTTTCAAGGATTGAGGACAAGAATGAATGATGAATATAAGGAAACAGTTGCAAGAA
GGTACTTTACTGTGACAGGAGAGAAAGCTGACGATGGGTTAATTGAGAATTTGATATCAA
GTGGGGAGAGCGAGTCTTTCCTCCAAAAGGCAATCCAGGAACAAGGTAGGGGTCAGATTA
TGGACACAATTTCCGAAATACAAGAAAGACATGATGCTGTGAAAGAGATTGAGAAGAATT
TGATTGAGCTACACCAAATATTTTTAGACATGGCTGCATTGGTGGAAGCACAAGGGCAAC
AATTAAATGATATTGAAAGTCATGTGGCACATGCAAGTTCCTTTGTTAGGAGGGGCACAG
AGCAATTACAAGAAGCTAGGGAGATTCAAAAAAGTTCAAGAAAGTGTGCTTGTTTTGCTG
TTTTCCTCATCATTTTGCTTATCATTCTTCTTACTTTCCCACTATGGTGGCCATTAGTTG
CTAGCAAAATATTATAAGATGACCTTTTTTTTCTTGGGCAATATGACTATTGTTTGTAAG
AATTTTATTCTTGTATTCATTGTCAACAATTTGTTTTCTTTGACATTGTATTTATAGAAG
CAATTTTTGTCACATCAATGGTTACATATATAGACATGTTTCAAGACACCTATGTATTTT
TGTAGAGGAAATTGCAAGATGAATGAAATTGTAAAGAGTAGATTATTAAAAGGATGTTTA
TAATTGAATATTGTATAGTCAAACTAACATTTAATTGATTGTCTTTCTTTTTTTCCCTTG
AAACAAAGTTTCATTAGTTTCTCTCTTCATTATATACAAGTTTGTTATTACTAGACTGGT
TGGATATTTGTTCTTAATGGTTCGACTTATACGTTATTGATTTTTAAACATACTAATCTG
TTAGTGTTGGTGCGATGAGTGATCTCCTTACTGAGTATGTTCGTGATGGTCTTGGCTTTA
TTAACATCAAACACAAAATCAACTAGTAAGTATGCCTTAAACTTATAGTGAAATCCCCCT
CTTCCACTATCAACATAGTTCATCAATAGTTCTATAAATGGTAAGAGCACAAAACAATCA
TAACAAACTCCATAATCATTAGAACTAAATATCAAGTACAAAAGACAACACAATTCTTCA
ACTCTCTAGGGTCGATCTAATTTGTAGATTAAATTATTAATTAACCATTAATTAACACGC
TACTTATATTATTCATACAAAAAAACTACGGAAGCAATACTATGAGTACCAATATGAATG
GACAATAAGATAAT