Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g005400.2.1
CDS Infomation	Cyclic nucleotide-gated ion channel, putative (AHRD V3.3 *** B9SIE1_RICCO)
Sequence	GAAAAAGAAGATGATAATTCAAATGACTACAACATTTGTAGTAGTCGTAGTCGAGGAGGA GGATTGACAGACTTCTTTTCGTGGAAAGTCATAGACCCTAGAGCGCCTTGGGTTCAAGAA TGGAATCGAGTATTTTTATTAGTATGTGCCACGGGGCTATTTGTGGATCCTCTCTTTTTC TACTCTCTCTCTATCAGCGAGACTTGCATGTGCCTTTTTATCGATGGTTGGTTTGCGGTA ACGGTCACCGTTCTTCGATGCATGACCGATGCGATGCATTTATGGAACATGTGGATACGA TTCAAGATGCATAAATTACGTCCTTACAATGAAAAAATGGATGAAAATCAAATTACTAGT AGTAGTCGAGGTCCACGACTACATCAAGACCAGAGTTTTCGATGTTTTGTGGCCTTACGA TACTTGAAATCCAAGAAGGGTTTCTTTTTGGATCTCTTTGTCATCCTTCCTTTACCTCAG ATAGTGATGTGGGTAGGGATTCCAGGTTTACTGGAGAAAGGATATACAACAACAGTAATG ACAGTATTATTAATAATGTTTCTGTTTCAATATCTGCCCAAAATTTATCACTCAGTTTGC CTGCTAAGACGCATGCAGAATCTCTCTGGATACATTTTTGGTACTGTTTGGTGGGGAATT GCTCTTAACTTGATTGCTTATTTTGTTGCCTCCCATGCAGTGGGAGCATGTTGGTACTTG CTAGGAATCCAAAGGGCAGCAAAATGTTTGAAACAACAGTGTAGAGTTACAAATGGTTGT AGCCTAAGAATGTTGGCATGTGAAGAGAAAATATTTTATGGAACAAGTAGTTTGGTGAAG CATAGAAGTAGAGTCATATGGGGTGAGTCCAAAATTGCAAGATCAACATGTCTAGCCTCT GAACACAATTTTGATTATGGAGTTTATAAATGGACTGTTCAACTTGTCACAAATGAGAAT CGTTTTGAGAAAATATTATTTCCCATCTTCTGGGGTCTCATGACTCTCAGTACATTTGGA AACTTGGAGAGCACAACAGATTGGCTGGAAGATGTATTCATAATCATTGTTCTCACTACT GGTCTTCTTCTTGTCACTATGTTGATTGGTAATATCAAGGTATTCTTGCATGCAACAACA TCAAAGAAACAAGCAATGCAACTAAAAATGAGAAATGTAGAATGGTGGATGAGGAGAAGA AGGTTGCCTCAAGGATACAAGCAAAGGGTCAGAAATTATGAAAGGCATAGATTTGCAGCA ACAAGAGGAGTTGATGAATATGAGATGATAAGCAACCTTCCTGAGGGACTTAGAAGAGAC ATCAAATATCATCTTTGTTTGGACTTGGTTAGACAGGTTCCTTTGTTTCAACATATGGAT AATTTGGTCCTGGAGAACATATGTGACCGCGTAAAATCCTTGATTTTCACTAAAGGAGAA ACAATAACAAGAGAAGGTGATCCAGTTCAAAGAATGTTGTTCATAGTGAGAGGTCATCTC CAAAGCAGTCAAGAACTTAGAGATGGTGTCAAAAGTTGTTGCATGTTGGGCCCTGGAAAC TTCAGCGGCGACGAACTTCTCTCATGGTGCCTCCGGAAACCCTTCGTGGAGCGTCTACCG CCTTCCTCCTCATCGCTAGTGACTCTCGAGACCACAGAAGCGTTTGGCCTCGAAGCAGAT GATGTCAAGTATGTCACTCAACATTTCCGCTACACATTTGTGAATGAGAAAGTGAAGAGA AGCGCCAGATATTATTCTCCAGGATGGCGAACTTGGGCTGCCGTTGCTATTCAGTTGGCC TGGAGGAGATATAGACACCGGCTGACTCTCACGTCGTTGTCCTTCATTCGACCAAGACGA CCGTTGTCTCGATCTTCTTCATTAACAGAAGACAGACTCAGGCTATATACAGCTTTGCTC ACTTCACCAAAGCCTAATCAGGACGATTTTGATTTTTAA

Peptide Sequence

PEP ID	Solyc12g005400.2.1
PEP Infomation	Cyclic nucleotide-gated ion channel, putative (AHRD V3.3 *** B9SIE1_RICCO)
Sequence	EKEDDNSNDYNICSSRSRGGGLTDFFSWKVIDPRAPWVQEWNRVFLLVCATGLFVDPLFF YSLSISETCMCLFIDGWFAVTVTVLRCMTDAMHLWNMWIRFKMHKLRPYNEKMDENQITS SSRGPRLHQDQSFRCFVALRYLKSKKGFFLDLFVILPLPQIVMWVGIPGLLEKGYTTTVM TVLLIMFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNLIAYFVASHAVGACWYL LGIQRAAKCLKQQCRVTNGCSLRMLACEEKIFYGTSSLVKHRSRVIWGESKIARSTCLAS EHNFDYGVYKWTVQLVTNENRFEKILFPIFWGLMTLSTFGNLESTTDWLEDVFIIIVLTT GLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNVEWWMRRRRLPQGYKQRVRNYERHRFAA TRGVDEYEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDNLVLENICDRVKSLIFTKGE TITREGDPVQRMLFIVRGHLQSSQELRDGVKSCCMLGPGNFSGDELLSWCLRKPFVERLP PSSSSLVTLETTEAFGLEADDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLA WRRYRHRLTLTSLSFIRPRRPLSRSSSLTEDRLRLYTALLTSPKPNQDDFDF*

Transcript Sequence

Transcript ID	Solyc12g005400.2.1
Transcript Infomation	Cyclic nucleotide-gated ion channel, putative (AHRD V3.3 *** B9SIE1_RICCO)
Sequence	GAAAAAGAAGATGATAATTCAAATGACTACAACATTTGTAGTAGTCGTAGTCGAGGAGGA GGATTGACAGACTTCTTTTCGTGGAAAGTCATAGACCCTAGAGCGCCTTGGGTTCAAGAA TGGAATCGAGTATTTTTATTAGTATGTGCCACGGGGCTATTTGTGGATCCTCTCTTTTTC TACTCTCTCTCTATCAGCGAGACTTGCATGTGCCTTTTTATCGATGGTTGGTTTGCGGTA ACGGTCACCGTTCTTCGATGCATGACCGATGCGATGCATTTATGGAACATGTGGATACGA TTCAAGATGCATAAATTACGTCCTTACAATGAAAAAATGGATGAAAATCAAATTACTAGT AGTAGTCGAGGTCCACGACTACATCAAGACCAGAGTTTTCGATGTTTTGTGGCCTTACGA TACTTGAAATCCAAGAAGGGTTTCTTTTTGGATCTCTTTGTCATCCTTCCTTTACCTCAG ATAGTGATGTGGGTAGGGATTCCAGGTTTACTGGAGAAAGGATATACAACAACAGTAATG ACAGTATTATTAATAATGTTTCTGTTTCAATATCTGCCCAAAATTTATCACTCAGTTTGC CTGCTAAGACGCATGCAGAATCTCTCTGGATACATTTTTGGTACTGTTTGGTGGGGAATT GCTCTTAACTTGATTGCTTATTTTGTTGCCTCCCATGCAGTGGGAGCATGTTGGTACTTG CTAGGAATCCAAAGGGCAGCAAAATGTTTGAAACAACAGTGTAGAGTTACAAATGGTTGT AGCCTAAGAATGTTGGCATGTGAAGAGAAAATATTTTATGGAACAAGTAGTTTGGTGAAG CATAGAAGTAGAGTCATATGGGGTGAGTCCAAAATTGCAAGATCAACATGTCTAGCCTCT GAACACAATTTTGATTATGGAGTTTATAAATGGACTGTTCAACTTGTCACAAATGAGAAT CGTTTTGAGAAAATATTATTTCCCATCTTCTGGGGTCTCATGACTCTCAGTACATTTGGA AACTTGGAGAGCACAACAGATTGGCTGGAAGATGTATTCATAATCATTGTTCTCACTACT GGTCTTCTTCTTGTCACTATGTTGATTGGTAATATCAAGGTATTCTTGCATGCAACAACA TCAAAGAAACAAGCAATGCAACTAAAAATGAGAAATGTAGAATGGTGGATGAGGAGAAGA AGGTTGCCTCAAGGATACAAGCAAAGGGTCAGAAATTATGAAAGGCATAGATTTGCAGCA ACAAGAGGAGTTGATGAATATGAGATGATAAGCAACCTTCCTGAGGGACTTAGAAGAGAC ATCAAATATCATCTTTGTTTGGACTTGGTTAGACAGGTTCCTTTGTTTCAACATATGGAT AATTTGGTCCTGGAGAACATATGTGACCGCGTAAAATCCTTGATTTTCACTAAAGGAGAA ACAATAACAAGAGAAGGTGATCCAGTTCAAAGAATGTTGTTCATAGTGAGAGGTCATCTC CAAAGCAGTCAAGAACTTAGAGATGGTGTCAAAAGTTGTTGCATGTTGGGCCCTGGAAAC TTCAGCGGCGACGAACTTCTCTCATGGTGCCTCCGGAAACCCTTCGTGGAGCGTCTACCG CCTTCCTCCTCATCGCTAGTGACTCTCGAGACCACAGAAGCGTTTGGCCTCGAAGCAGAT GATGTCAAGTATGTCACTCAACATTTCCGCTACACATTTGTGAATGAGAAAGTGAAGAGA AGCGCCAGATATTATTCTCCAGGATGGCGAACTTGGGCTGCCGTTGCTATTCAGTTGGCC TGGAGGAGATATAGACACCGGCTGACTCTCACGTCGTTGTCCTTCATTCGACCAAGACGA CCGTTGTCTCGATCTTCTTCATTAACAGAAGACAGACTCAGGCTATATACAGCTTTGCTC ACTTCACCAAAGCCTAATCAGGACGATTTTGATTTTTAAAAAGAGCAACAAACAAATGGA ATGTTACCTTCTTTCTGTTATGAGATAGGAGCACATCCCCCTCCCTCTATATGTCCTTCA ATTATCCATTCATGTGATATGTAG