Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g005340.2.1
CDS Infomation

GRAS family transcription factor (AHRD V3.3 *** D4QD66_DIACA)
Sequence

ATGGACTCGCACCATTTGGTTGCTTATGGTGTGACCGGTAGTGATTTGTCGTATTCTTCA
TGCCCTACTGTTAGTCCTCTAGAGAATAGACCATTTGGTACATCGAAATTTGATTCAGGA
AATTCGCCACTTGTGAACTATTTTAACTCTGAGACCTTCAACACAGTAAGTGATTACCAG
GAGCAGCCCAGCTGTACAGAGAATCTTTCAGGTGCTAGTTCTTCAAGTGGTTCCTCACTG
GATTATAACCAATATTTCCATCGACCAAGCCCCTCGGAAGATCATCTTCCAGAAGCTCCT
TACAGTCGGAACATGAAACATACTCTGCTGCAGTTGGAGTCTGCTTTAATGGGGCCAGAC
AAAGAGGCAATGAAATCCAGCCCTTATCTTGGTGAAAATATGGGGGCACAAACATCAGGT
CAGAGGTATAAAGCGTGGAACAAGGAAGCCCAAGTTGTGCGTCATCAACAATCAGTAGTT
TCAATCCTTAATGGAATTCAAAGTGATAAGCGAGACAATGTAATGGAGGACTTGCCCTTG
CAGGGTGTTCCGTCTAGCAATCTGAAGCAGCTGCTTATAGCATGCGCCAGAGCTCTTGCT
GAAAACAAGCTAGATGATTTTGAAATACTGGTTGCTAAGGCAAGGAGTGTTGTGTCCGTT
ACTGGAGATCCCATCCAGCGTCTTGGTGCTTACATTGTAGAAGGCCTCGTAGCAAGAAAG
GAGTTATCTGGAACTACCATATACAGGAGTTTAAAGTGTAAGGAGCCGGCTGGTAAGGAC
TTGTTCTCCTACATGTATATCCTCTATGAAATATGTCCTTACCTAAAGTTCGGCTACATG
GCTGCAAATGGTGCCATAGTAGAAGCATGCAGAAATGAAGATCGCATCCACATTATAGAC
TTCCAAATTGCACAGGGGACCCAATGGATGACTCTCTTACAAGCTCTTGCAGCACGACCC
GGTGGTGCCCCCTACGTACGTATTACAGGAATTGATGATCCAGTTTCACAGTACGCTCGG
GGAGATGGATTGGCTGCAGTTGCCAGACGGCTATCAGCAATTTCTGAGGAATTCAACATT
GCTGTTGAGTTTCATGCAGTGCCAGTTTTTGCTCCGGAAATCACTTGGGATATGCTTGAT
GTAAGGCCTGGTGAGGCTCTGGCTGTAAACTTTCCTTTGCAACTTCACCACACCCCTGAT
GAGAGCGTTGACGTGAATAACCCTAGAGATGGTCTCATTAGGATGATAAAGTCGCTTAGC
CCCAAGATAGTCACTTTGGTGGAGCAAGAATCAAACACGAACACAGCTCCATTTCTCCCT
AGGTTTGTAGAAGCTCTAGATTACTACCATGCAATGTTTGAGTCCATAGATGTGACCCTA
CTAAGGGACATGAAGGAGCGGATCAATGTGGAACAGCACTGTTTGGCTAGGGATATAGTG
AATGTCATAGCATGTGAGGGCAAGGAAAGAGTAGAACGTCACGAGCTATTGGGGAAGTGG
AAATCCAGGTTCATGATGGCAGGTTTTCAGCAATATCCTTTGAGCTCTTATGTGAATTCA
GTGATTAAGGACCTCATGAAGCGTTACTCGGAGCATTATACACTGGTGGAGAAAGACGGA
GCTATGCTGTTGGGGTGGAAGGAGCGGAATCTAGTCTCTGCGTCTTTTAGTTGTTTATTT
TTCAAGTTATCGTTTGATATTATTTGTTAA

Peptide Sequence

PEP ID

Solyc12g005340.2.1
PEP Infomation

GRAS family transcription factor (AHRD V3.3 *** D4QD66_DIACA)
Sequence

MDSHHLVAYGVTGSDLSYSSCPTVSPLENRPFGTSKFDSGNSPLVNYFNSETFNTVSDYQ
EQPSCTENLSGASSSSGSSLDYNQYFHRPSPSEDHLPEAPYSRNMKHTLLQLESALMGPD
KEAMKSSPYLGENMGAQTSGQRYKAWNKEAQVVRHQQSVVSILNGIQSDKRDNVMEDLPL
QGVPSSNLKQLLIACARALAENKLDDFEILVAKARSVVSVTGDPIQRLGAYIVEGLVARK
ELSGTTIYRSLKCKEPAGKDLFSYMYILYEICPYLKFGYMAANGAIVEACRNEDRIHIID
FQIAQGTQWMTLLQALAARPGGAPYVRITGIDDPVSQYARGDGLAAVARRLSAISEEFNI
AVEFHAVPVFAPEITWDMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDGLIRMIKSLS
PKIVTLVEQESNTNTAPFLPRFVEALDYYHAMFESIDVTLLRDMKERINVEQHCLARDIV
NVIACEGKERVERHELLGKWKSRFMMAGFQQYPLSSYVNSVIKDLMKRYSEHYTLVEKDG
AMLLGWKERNLVSASFSCLFFKLSFDIIC*

Transcript Sequence

Transcript ID

Solyc12g005340.2.1
Transcript Infomation

GRAS family transcription factor (AHRD V3.3 *** D4QD66_DIACA)
Sequence

ATTCCCTATATATATATTTCTCCATTTCTTATTTCTAATTTCACTGCTAAATTTTTCTCC
AAATTTTATCAATCTACAAGTTAGATTCCTCCTTCTGCAGATTATATCAGGTGGATTTCG
GTGAAGCAGATATTAAGTGTTAGTGAGAAAGAGTTTGCGCATAGAGCAGCTAATGACAGC
CGTATAGTATGGACTCGCACCATTTGGTTGCTTATGGTGTGACCGGTAGTGATTTGTCGT
ATTCTTCATGCCCTACTGTTAGTCCTCTAGAGAATAGACCATTTGGTACATCGAAATTTG
ATTCAGGAAATTCGCCACTTGTGAACTATTTTAACTCTGAGACCTTCAACACAGTAAGTG
ATTACCAGGAGCAGCCCAGCTGTACAGAGAATCTTTCAGGTGCTAGTTCTTCAAGTGGTT
CCTCACTGGATTATAACCAATATTTCCATCGACCAAGCCCCTCGGAAGATCATCTTCCAG
AAGCTCCTTACAGTCGGAACATGAAACATACTCTGCTGCAGTTGGAGTCTGCTTTAATGG
GGCCAGACAAAGAGGCAATGAAATCCAGCCCTTATCTTGGTGAAAATATGGGGGCACAAA
CATCAGGTCAGAGGTATAAAGCGTGGAACAAGGAAGCCCAAGTTGTGCGTCATCAACAAT
CAGTAGTTTCAATCCTTAATGGAATTCAAAGTGATAAGCGAGACAATGTAATGGAGGACT
TGCCCTTGCAGGGTGTTCCGTCTAGCAATCTGAAGCAGCTGCTTATAGCATGCGCCAGAG
CTCTTGCTGAAAACAAGCTAGATGATTTTGAAATACTGGTTGCTAAGGCAAGGAGTGTTG
TGTCCGTTACTGGAGATCCCATCCAGCGTCTTGGTGCTTACATTGTAGAAGGCCTCGTAG
CAAGAAAGGAGTTATCTGGAACTACCATATACAGGAGTTTAAAGTGTAAGGAGCCGGCTG
GTAAGGACTTGTTCTCCTACATGTATATCCTCTATGAAATATGTCCTTACCTAAAGTTCG
GCTACATGGCTGCAAATGGTGCCATAGTAGAAGCATGCAGAAATGAAGATCGCATCCACA
TTATAGACTTCCAAATTGCACAGGGGACCCAATGGATGACTCTCTTACAAGCTCTTGCAG
CACGACCCGGTGGTGCCCCCTACGTACGTATTACAGGAATTGATGATCCAGTTTCACAGT
ACGCTCGGGGAGATGGATTGGCTGCAGTTGCCAGACGGCTATCAGCAATTTCTGAGGAAT
TCAACATTGCTGTTGAGTTTCATGCAGTGCCAGTTTTTGCTCCGGAAATCACTTGGGATA
TGCTTGATGTAAGGCCTGGTGAGGCTCTGGCTGTAAACTTTCCTTTGCAACTTCACCACA
CCCCTGATGAGAGCGTTGACGTGAATAACCCTAGAGATGGTCTCATTAGGATGATAAAGT
CGCTTAGCCCCAAGATAGTCACTTTGGTGGAGCAAGAATCAAACACGAACACAGCTCCAT
TTCTCCCTAGGTTTGTAGAAGCTCTAGATTACTACCATGCAATGTTTGAGTCCATAGATG
TGACCCTACTAAGGGACATGAAGGAGCGGATCAATGTGGAACAGCACTGTTTGGCTAGGG
ATATAGTGAATGTCATAGCATGTGAGGGCAAGGAAAGAGTAGAACGTCACGAGCTATTGG
GGAAGTGGAAATCCAGGTTCATGATGGCAGGTTTTCAGCAATATCCTTTGAGCTCTTATG
TGAATTCAGTGATTAAGGACCTCATGAAGCGTTACTCGGAGCATTATACACTGGTGGAGA
AAGACGGAGCTATGCTGTTGGGGTGGAAGGAGCGGAATCTAGTCTCTGCGTCTTTTAGTT
GTTTATTTTTCAAGTTATCGTTTGATATTATTTGTTAAAACTTATAAACAATTATATCTC
GTCCTTGATGATTTGTTGAGCAACTTTGG