Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g073110.2.1
CDS Infomation	UPSTREAM OF FLC protein (DUF966) (AHRD V3.3 *** AT5G59790.1)
Sequence	ATGGCGACATTTGTTAGAGCAAAGGACCAAAAATGGAAAGATAGAGAAACTAGTAACAAA GTTTGGATTGAAAATCAAAATCATAAGCTCAAATCGGAACGCAAAGTGCCTGTTGTTTAT TATCTCACTAGAAATGGACAACTTGAACATCCTCATTTCATGGAAGTTACACTTTCTTCC CCTGACGAAGGACTTTATCTTAGAGATGTCATCAACCGCTTGAATTTTCTCAGGGGAAAA GGCATCGCTTCCCTCTATTCCTGGTCTGCCAAAAGAAGCTACAGAAATGGATTTGTGTGG CACGATTTGGCGGACCATGATTTTATATATCCAGCACACGGCCAAGAGTACGTTCTCAAA GGATCACAACTTGTTGAGGGTGCAACAACGCTGACATCTAAAAATCAGGTGCCGGAAGTG AGAAAACTCCCGGCTGTATCACGGCGGCGCAACCAGTCCTGGTGCTCTGCCGACTTCCAC GAATACAGAGTCTACAAAGCAGAGTCGTCCAGTAACGAATACTCCGGCAAAGCCGGCGCT GATGCGTCAACTCAGACAGACGATCGCCGTCGCCGGCGAAGAGAAATTGGAATTGGTGAA GAGGAAGAAGAAGAAGTTAGCATTTCACCTCCGCCGTCTGATTCAAGTCCGGAAACACTT GAAACGTTGATGAAAGCCGATGGTAAGGTAATCGTACGTCCAGAAACAGATGAATCGAAT GGAAAGAGCAGAGGATCTTCTTCCGTGTTGATGCAATTATTATGGTGTGGGTCAATGTCG TTCAAGGACTGTGGGCCCGGCGGTTATGGAAAAGATCATGGGCTTTCCCATTACAAATCG AGGGTGCCACGTGGACCGGTGGCAGAGATCAGTAGGAGGGTGGAGCATCAGGGAATCACA AAGCTAGAAGAGTACTTGAGCGGAAGCTTAATAGAGACAAACAAGGACGAATATCCAGCT CTGAAAAGATCTTCATCATGGAATGCAGATGGGAGTGCAAAATTGGAAATAAGGGAGAAG GAGATAGAAGGGGTGAGAGCAAAATGCATTCCAACAAGGCCAAAGAATCAATCCAGCAGA AAGGAATTAGGAAGCAGCATTCACTTGTCTAGTAGTAGCAGTAGCCAACAGGGTAGCAAA AGGCTAGTGCTTCCACCCCAACTCTAG

Peptide Sequence

PEP ID	Solyc11g073110.2.1
PEP Infomation	UPSTREAM OF FLC protein (DUF966) (AHRD V3.3 *** AT5G59790.1)
Sequence	MATFVRAKDQKWKDRETSNKVWIENQNHKLKSERKVPVVYYLTRNGQLEHPHFMEVTLSS PDEGLYLRDVINRLNFLRGKGIASLYSWSAKRSYRNGFVWHDLADHDFIYPAHGQEYVLK GSQLVEGATTLTSKNQVPEVRKLPAVSRRRNQSWCSADFHEYRVYKAESSSNEYSGKAGA DASTQTDDRRRRRREIGIGEEEEEEVSISPPPSDSSPETLETLMKADGKVIVRPETDESN GKSRGSSSVLMQLLWCGSMSFKDCGPGGYGKDHGLSHYKSRVPRGPVAEISRRVEHQGIT KLEEYLSGSLIETNKDEYPALKRSSSWNADGSAKLEIREKEIEGVRAKCIPTRPKNQSSR KELGSSIHLSSSSSSQQGSKRLVLPPQL*

Transcript Sequence

Transcript ID	Solyc11g073110.2.1
Transcript Infomation	UPSTREAM OF FLC protein (DUF966) (AHRD V3.3 *** AT5G59790.1)
Sequence	ATGGCGACATTTGTTAGAGCAAAGGACCAAAAATGGAAAGATAGAGAAACTAGTAACAAA GTTTGGATTGAAAATCAAAATCATAAGCTCAAATCGGAACGCAAAGTGCCTGTTGTTTAT TATCTCACTAGAAATGGACAACTTGAACATCCTCATTTCATGGAAGTTACACTTTCTTCC CCTGACGAAGGACTTTATCTTAGAGATGTCATCAACCGCTTGAATTTTCTCAGGGGAAAA GGCATCGCTTCCCTCTATTCCTGGTCTGCCAAAAGAAGCTACAGAAATGGATTTGTGTGG CACGATTTGGCGGACCATGATTTTATATATCCAGCACACGGCCAAGAGTACGTTCTCAAA GGATCACAACTTGTTGAGGGTGCAACAACGCTGACATCTAAAAATCAGGTGCCGGAAGTG AGAAAACTCCCGGCTGTATCACGGCGGCGCAACCAGTCCTGGTGCTCTGCCGACTTCCAC GAATACAGAGTCTACAAAGCAGAGTCGTCCAGTAACGAATACTCCGGCAAAGCCGGCGCT GATGCGTCAACTCAGACAGACGATCGCCGTCGCCGGCGAAGAGAAATTGGAATTGGTGAA GAGGAAGAAGAAGAAGTTAGCATTTCACCTCCGCCGTCTGATTCAAGTCCGGAAACACTT GAAACGTTGATGAAAGCCGATGGTAAGGTAATCGTACGTCCAGAAACAGATGAATCGAAT GGAAAGAGCAGAGGATCTTCTTCCGTGTTGATGCAATTATTATGGTGTGGGTCAATGTCG TTCAAGGACTGTGGGCCCGGCGGTTATGGAAAAGATCATGGGCTTTCCCATTACAAATCG AGGGTGCCACGTGGACCGGTGGCAGAGATCAGTAGGAGGGTGGAGCATCAGGGAATCACA AAGCTAGAAGAGTACTTGAGCGGAAGCTTAATAGAGACAAACAAGGACGAATATCCAGCT CTGAAAAGATCTTCATCATGGAATGCAGATGGGAGTGCAAAATTGGAAATAAGGGAGAAG GAGATAGAAGGGGTGAGAGCAAAATGCATTCCAACAAGGCCAAAGAATCAATCCAGCAGA AAGGAATTAGGAAGCAGCATTCACTTGTCTAGTAGTAGCAGTAGCCAACAGGGTAGCAAA AGGCTAGTGCTTCCACCCCAACTCTAGATGTAGTACTAGTTTAAGGATGATCAGAACCAT TATTCACCCAAACAATCTCCATCGTATGTTGTAAATACAATGGAATTAACCTAGAAATTT CATCTGCCAAATCACTTCAAGTTTAATATAATTTTGATAATCTATTATGACTAGCTAATT CGTCAAAATATGGAAAGCGAGACTGAGATGATCTGGAAATGTGAAGTGATTAGTCAGGAC ATGACACAATTTCAATTTACGGACGACATAATCTTAGAATAAAGCGTTTGTCAAGTAGTT GAGAGTTATATGGTTCATCATTCCACCCTAGTGTTATTTGAGAGTTTGCCTATTTTACTA TTTTGCATTTGTCTCGACTTCTTTATTCTTATTATTTTCTTTTCACAAACTCTTTTGTAA TGCCAAGGGAAATTTCTTTTACACACACATGAGCTCAAAGAAAAGACATTTGGCAGCTGA GACCTTATTTTGCCTTAAACATTATATATATGACTTGGTCAAATTTCTTGATATTATGTT GACCTTTTCTACCATCTAGAAGTTATAAAAGAAAAAACTACTTTTCTACATAGCCTCAGC ATCGATTAGAAGAAGACCTATGAGTTGTTTAATCTGGAAAAAAAAGAGTTGTGTTGACCT TTAGCTCCTTTTTTTTAAAAAAATAGAATAAATCTCGTAAATGGTGACAAATATGACTCG TAAATAAGTGGAAATTCAGAAGAGAAATTGAATATTTTATTACTTGTATAAAAAAGTTAA CAGCTCAACCTTTAAGACCTTTGAATAATTGTCAACATTGTCTTATATCTATGCAACAAG ATTCTCCCCATTTTCTGACTTCACAAGAAATAAAGTTTAAAATATATTAATTATACAATA CAAATTTGAA