Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g072960.1.1
CDS Infomation

Ankyrin repeat family protein (AHRD V3.3 *** AT1G07710.2)
Sequence

ATGGAGACACCAGCAGCTCAGCCAACTACACCCCGGAAAAAGATGACGAAACAATTAACA
GGGAAACGCGATGATAGTGCCTTGCATTCGGCAGCTAGAGCTGGAAATCTTGTTGCAATC
AAAAATACTATCGAGGAAACGGATGAGGAAGAATTGGCAGAGTTATTGATAAAGCAAAAT
TCAGCTGGAGAGACACCTTTGTATGTTGCAGCTGAATATGGTTACTATGAGGTGGTTAGG
GAGATGATCATGTACTATGATCTCGTTGCAGCTGGAATCAAAGCCAGGAACGGCTTTGAT
GCACTGCACATTGCTGCCAAACAAGGAGATTTAGATGTGGTGAAGGTATTGATGGAAGCA
CATCCCGAGCTTGCTATGACTGTTGATGTAGTAAATACAACAGCTTTGCATACTGCAGCG
AACCAAGGGCACTTAGAGATGGTGAATTATCTCTTGGAGGAACAAAGCAGTTTGGCCACT
ATAGCTAAAAGTAATGGGAAAACCGCATTACATTCTTCAGCAAGAAATGGACATTTGCAG
GTTTTGAAGGCTCTTTTGAGTAAGGAGCCAGGGATCGCAACGCGGATGGATAACAAGGGA
CAGACCGCACTTCACATGGCTGTCAAAGGACAAAATCTCGAGGTTGTAGAGGAGCTCACT
AACGCTGATCCTTCATTACTTAACATGGTCGACAATAAGGGAAACACACCTTTGCATATA
GCGTCTCGTAAAGGAAGGGCTGAGGTTGTTAAGTTGCTGCTCTCACAGAACGAAACAGAC
ACGGAAGTTATCAATAGGTCACATGAAACAGCTCTAGACACTGCTGAGAAAATGTCACAG
GCTGACACGGTAGCCATCCTGCAGGAATATGGGGTTCAGAGTGCCCGAGTGCTAAAGCCA
CAGGCAACGAATCCAGCTAGAGAGTTGAAGCAAACCGTTAGTGACATTAAGCACGAGGTT
CACGATCAGTTAAAACACACAAAACAAACTAGAAGACGCATTCAAGGCATTGCCAAGCGG
TTGCACAAGATGCACAGAGAAGGGCTTAACAACGCGATCAACTCAACCACAGTTGTAGCT
GTACTCATTGCCACAGTTGCGTTTGCAGGAATATTTCAAGTGCCAGGGCAATACTATATG
GATCCGACCAACCTCCCAGCGGGCCATATAATTGGAGAAGCAAACATATCAAACCACCCT
GGATTCCTGGTGTTCTTTGTCTTTGACTCAATCGCGTTATTCATTTCACTAGCAGTTGTG
GTAGTGCAGACAACAGTGGTGGCTATAGAGAGCAAAGCAAAGAAGAAGTTGATGGCAATC
ATAAACAAGCTAATGTGGGTAGCATGTGTGTTTGTATCAGTTGCATACTTGGCTCTATCT
TTTGTAGTCGTTGGCACGCGTTATTGGGTGATGGCAGTTATTGTAACAGTACTCGGGGCA
ACTATAATGGCTTCAACAATTGGAGTAATGTTATATTGGGTCATTAAGCATCGCATCGAG
TCATCCAACAAGAAGAGCATGAGAAGGAACTCTATGGAATACTCTGATTCAGCCCTCTCT
GATGACAACAATGAATTCAAAATATATGCCTTATAA

Peptide Sequence

PEP ID

Solyc11g072960.1.1
PEP Infomation

Ankyrin repeat family protein (AHRD V3.3 *** AT1G07710.2)
Sequence

METPAAQPTTPRKKMTKQLTGKRDDSALHSAARAGNLVAIKNTIEETDEEELAELLIKQN
SAGETPLYVAAEYGYYEVVREMIMYYDLVAAGIKARNGFDALHIAAKQGDLDVVKVLMEA
HPELAMTVDVVNTTALHTAANQGHLEMVNYLLEEQSSLATIAKSNGKTALHSSARNGHLQ
VLKALLSKEPGIATRMDNKGQTALHMAVKGQNLEVVEELTNADPSLLNMVDNKGNTPLHI
ASRKGRAEVVKLLLSQNETDTEVINRSHETALDTAEKMSQADTVAILQEYGVQSARVLKP
QATNPARELKQTVSDIKHEVHDQLKHTKQTRRRIQGIAKRLHKMHREGLNNAINSTTVVA
VLIATVAFAGIFQVPGQYYMDPTNLPAGHIIGEANISNHPGFLVFFVFDSIALFISLAVV
VVQTTVVAIESKAKKKLMAIINKLMWVACVFVSVAYLALSFVVVGTRYWVMAVIVTVLGA
TIMASTIGVMLYWVIKHRIESSNKKSMRRNSMEYSDSALSDDNNEFKIYAL*

Transcript Sequence

Transcript ID

Solyc11g072960.1.1
Transcript Infomation

Ankyrin repeat family protein (AHRD V3.3 *** AT1G07710.2)
Sequence

ATGGAGACACCAGCAGCTCAGCCAACTACACCCCGGAAAAAGATGACGAAACAATTAACA
GGGAAACGCGATGATAGTGCCTTGCATTCGGCAGCTAGAGCTGGAAATCTTGTTGCAATC
AAAAATACTATCGAGGAAACGGATGAGGAAGAATTGGCAGAGTTATTGATAAAGCAAAAT
TCAGCTGGAGAGACACCTTTGTATGTTGCAGCTGAATATGGTTACTATGAGGTGGTTAGG
GAGATGATCATGTACTATGATCTCGTTGCAGCTGGAATCAAAGCCAGGAACGGCTTTGAT
GCACTGCACATTGCTGCCAAACAAGGAGATTTAGATGTGGTGAAGGTATTGATGGAAGCA
CATCCCGAGCTTGCTATGACTGTTGATGTAGTAAATACAACAGCTTTGCATACTGCAGCG
AACCAAGGGCACTTAGAGATGGTGAATTATCTCTTGGAGGAACAAAGCAGTTTGGCCACT
ATAGCTAAAAGTAATGGGAAAACCGCATTACATTCTTCAGCAAGAAATGGACATTTGCAG
GTTTTGAAGGCTCTTTTGAGTAAGGAGCCAGGGATCGCAACGCGGATGGATAACAAGGGA
CAGACCGCACTTCACATGGCTGTCAAAGGACAAAATCTCGAGGTTGTAGAGGAGCTCACT
AACGCTGATCCTTCATTACTTAACATGGTCGACAATAAGGGAAACACACCTTTGCATATA
GCGTCTCGTAAAGGAAGGGCTGAGGTTGTTAAGTTGCTGCTCTCACAGAACGAAACAGAC
ACGGAAGTTATCAATAGGTCACATGAAACAGCTCTAGACACTGCTGAGAAAATGTCACAG
GCTGACACGGTAGCCATCCTGCAGGAATATGGGGTTCAGAGTGCCCGAGTGCTAAAGCCA
CAGGCAACGAATCCAGCTAGAGAGTTGAAGCAAACCGTTAGTGACATTAAGCACGAGGTT
CACGATCAGTTAAAACACACAAAACAAACTAGAAGACGCATTCAAGGCATTGCCAAGCGG
TTGCACAAGATGCACAGAGAAGGGCTTAACAACGCGATCAACTCAACCACAGTTGTAGCT
GTACTCATTGCCACAGTTGCGTTTGCAGGAATATTTCAAGTGCCAGGGCAATACTATATG
GATCCGACCAACCTCCCAGCGGGCCATATAATTGGAGAAGCAAACATATCAAACCACCCT
GGATTCCTGGTGTTCTTTGTCTTTGACTCAATCGCGTTATTCATTTCACTAGCAGTTGTG
GTAGTGCAGACAACAGTGGTGGCTATAGAGAGCAAAGCAAAGAAGAAGTTGATGGCAATC
ATAAACAAGCTAATGTGGGTAGCATGTGTGTTTGTATCAGTTGCATACTTGGCTCTATCT
TTTGTAGTCGTTGGCACGCGTTATTGGGTGATGGCAGTTATTGTAACAGTACTCGGGGCA
ACTATAATGGCTTCAACAATTGGAGTAATGTTATATTGGGTCATTAAGCATCGCATCGAG
TCATCCAACAAGAAGAGCATGAGAAGGAACTCTATGGAATACTCTGATTCAGCCCTCTCT
GATGACAACAATGAATTCAAAATATATGCCTTATAA