Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g072940.2.1
CDS Infomation	CCR4-NOT transcription complex subunit 2 (AHRD V3.3 *** G7IUA4_MEDTR)
Sequence	ATGTCAGGATTACCCAATTCTTCTCTAAAGGGATCAGCTTCAAATCCTTCCGACAACACT GGTCGCTCATTTCCTTCTTCTTTCCCTCCTCAATCTGGTGCAGCTTCCCCTCTCTATCAT CACTCTGGAAGTATTCAGGGGCTGCATAATATTCATGGGAGTTTCAACATTGCTAACATG CACGGAGCACTTGGTTCAAGAAACACAGCAATAAATACCGTCCCTCCCAATGGTGTCCAG CAATCTGGAAATAACCTTTCTGGTGGTCGTTTTTCGTCAAACAATCTTCCGGCTTCCCTT TCTCAGATATCTCAAGGCAATTCTCACGTTCATTCTGGAATGACAAGTAGAGGTGGTATG AGTGTTGTTGGTAATGCGGGCTATAGCAATAATGCTAGTGGCGTTGGAGGTTCTATTCCT GGGCTTCTCCCAACTTCTGCAGGAATTGGTAATCGAAGCTCTGTGCCAGGCCTTGGGGTA TCCCAAATTTTAGGTAATGCAGGCCCAAGGATGACCAATTCAGTGGGAAATATTGTTGGT GGGGGCAACATTGGCAGAAGCATTAGCTCTGCAGGATTGTCTGTGACTAATCTTGCTTCA CGGTTAAATATGAACGCCAATGCCGGTTCTGGAAATTTAAATGTTCAAGGACCTAATAGG ATAATGAGTGGTGTTCTTCAGCAAGCCTCTCCGCAGGTACTTTCTATGTTAGGAAATTCC TATTCTGCTGGTGGTCCACTAGCTCAAAACCATGTCCAAGCAATGGGAAACCTTAATTCT TTGGGATTGTTGAATGATGTAAATTCAAATGATGGATCTCCTTTTGATATCAATGATTTC CCTCAGTTAAGCAGTCGACCTAGTTCTGCTGGAGGACCTCAAGGACAAATGGGTTCTTTG CGGAAACAAGGGATCAGTCCTATTGTTCAGCAAAACCAGGAATTCAGCATTCAAAATGAA GATTTTCCTGCTTTACCAGGATTTAAAGGTGGGAATGCTGATTATGCGATGGATCCTCAC CAGAAAGAGCAGCTTCATGATAATGCTCTTTCTATGATGCAACAGCAACACTTCTCAATG GGAAGATCCACAGGTTTTAATTTGGGTGGAACATATTCATCACATCGTCCGCAGCCGCAG CTGCAACATGCTCCATCTGTTAGTAGTACGGGTGTCTCTTTTTCAAATATAAACAACCAG GATCTGCTGAGTTTACATGGTCCAGATGTCTTCCAATCATCGCAGTCCAATTATCATCAA CAGAGTGGTGGACCTCCCGGTATAGGATTACGGCCTCTTAATTCGTCAAGTAATGTTTCT GGTATTGGATCATATGATCAGCTCATTCAGGCTCAGCAGTACCAACAGCATCAGGGTCCA TCCCAATTCAGTGTAATACAGATGAACGATCCAGATTTGACTTCTCTTGCACTTGGAATT GATCTAACAACACTTGGTTTGAATTTGAACTCTGCTGAGAATTTGTACAAGACTTTTGGT TCCCCATGGTCTGATGAGCCTGCCAAAGGGGATCCAGAATTTACTGCACCCCAATGTTAT TATGCGAAGCAACCCCCACCTTTAAATCAAGCATACTTCTCAAAGTTTCAGCTGGATACT TTGTTTTACATATTTTACAGCATGCCAAAAGATGAAGCGCAACTGTATGCTGCAAATGAA CTGTATAACCGCGGATGGTTTTATCACAGAGAACATCGGTTGTGGTTTATGAGGGTCGCC AACATGGAGCCTCTTGTCAAGACGAATGCATATGAGAGAGGGTCTTACATTTGTTTTGAT CCAAACACATGGGAGACAATCCGTAAGGATAACTTTGTCGTCCACTATGAAATGTTGGAA AAAAGACCTGTTTTACCTCAACACTGA

Peptide Sequence

PEP ID	Solyc11g072940.2.1
PEP Infomation	CCR4-NOT transcription complex subunit 2 (AHRD V3.3 *** G7IUA4_MEDTR)
Sequence	MSGLPNSSLKGSASNPSDNTGRSFPSSFPPQSGAASPLYHHSGSIQGLHNIHGSFNIANM HGALGSRNTAINTVPPNGVQQSGNNLSGGRFSSNNLPASLSQISQGNSHVHSGMTSRGGM SVVGNAGYSNNASGVGGSIPGLLPTSAGIGNRSSVPGLGVSQILGNAGPRMTNSVGNIVG GGNIGRSISSAGLSVTNLASRLNMNANAGSGNLNVQGPNRIMSGVLQQASPQVLSMLGNS YSAGGPLAQNHVQAMGNLNSLGLLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQGQMGSL RKQGISPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDPHQKEQLHDNALSMMQQQHFSM GRSTGFNLGGTYSSHRPQPQLQHAPSVSSTGVSFSNINNQDLLSLHGPDVFQSSQSNYHQ QSGGPPGIGLRPLNSSSNVSGIGSYDQLIQAQQYQQHQGPSQFSVIQMNDPDLTSLALGI DLTTLGLNLNSAENLYKTFGSPWSDEPAKGDPEFTAPQCYYAKQPPPLNQAYFSKFQLDT LFYIFYSMPKDEAQLYAANELYNRGWFYHREHRLWFMRVANMEPLVKTNAYERGSYICFD PNTWETIRKDNFVVHYEMLEKRPVLPQH*

Transcript Sequence

Transcript ID	Solyc11g072940.2.1
Transcript Infomation	CCR4-NOT transcription complex subunit 2 (AHRD V3.3 *** G7IUA4_MEDTR)
Sequence	AGTGTGTTTATATATTTGGCCATTTTCTTTTCATTTCCCCCTTTTCTCTCTCATCAAAAT CACCTGACGAAGATCAGTAGCTCGCACCTCTTCTTCCCCGATAATAGGTATTTACTCGTT GGAAAGGCTTCCAATAATTTCTCCCATAACCTTTCCGGAGAAAAGGATAAGGGAAGCTGC TGTACAACCAGGAAGAAATTCTGCATGACATCTTGACATTTCTGCAATGTCAGGATTACC CAATTCTTCTCTAAAGGGATCAGCTTCAAATCCTTCCGACAACACTGGTCGCTCATTTCC TTCTTCTTTCCCTCCTCAATCTGGTGCAGCTTCCCCTCTCTATCATCACTCTGGAAGTAT TCAGGGGCTGCATAATATTCATGGGAGTTTCAACATTGCTAACATGCACGGAGCACTTGG TTCAAGAAACACAGCAATAAATACCGTCCCTCCCAATGGTGTCCAGCAATCTGGAAATAA CCTTTCTGGTGGTCGTTTTTCGTCAAACAATCTTCCGGCTTCCCTTTCTCAGATATCTCA AGGCAATTCTCACGTTCATTCTGGAATGACAAGTAGAGGTGGTATGAGTGTTGTTGGTAA TGCGGGCTATAGCAATAATGCTAGTGGCGTTGGAGGTTCTATTCCTGGGCTTCTCCCAAC TTCTGCAGGAATTGGTAATCGAAGCTCTGTGCCAGGCCTTGGGGTATCCCAAATTTTAGG TAATGCAGGCCCAAGGATGACCAATTCAGTGGGAAATATTGTTGGTGGGGGCAACATTGG CAGAAGCATTAGCTCTGCAGGATTGTCTGTGACTAATCTTGCTTCACGGTTAAATATGAA CGCCAATGCCGGTTCTGGAAATTTAAATGTTCAAGGACCTAATAGGATAATGAGTGGTGT TCTTCAGCAAGCCTCTCCGCAGGTACTTTCTATGTTAGGAAATTCCTATTCTGCTGGTGG TCCACTAGCTCAAAACCATGTCCAAGCAATGGGAAACCTTAATTCTTTGGGATTGTTGAA TGATGTAAATTCAAATGATGGATCTCCTTTTGATATCAATGATTTCCCTCAGTTAAGCAG TCGACCTAGTTCTGCTGGAGGACCTCAAGGACAAATGGGTTCTTTGCGGAAACAAGGGAT CAGTCCTATTGTTCAGCAAAACCAGGAATTCAGCATTCAAAATGAAGATTTTCCTGCTTT ACCAGGATTTAAAGGTGGGAATGCTGATTATGCGATGGATCCTCACCAGAAAGAGCAGCT TCATGATAATGCTCTTTCTATGATGCAACAGCAACACTTCTCAATGGGAAGATCCACAGG TTTTAATTTGGGTGGAACATATTCATCACATCGTCCGCAGCCGCAGCTGCAACATGCTCC ATCTGTTAGTAGTACGGGTGTCTCTTTTTCAAATATAAACAACCAGGATCTGCTGAGTTT ACATGGTCCAGATGTCTTCCAATCATCGCAGTCCAATTATCATCAACAGAGTGGTGGACC TCCCGGTATAGGATTACGGCCTCTTAATTCGTCAAGTAATGTTTCTGGTATTGGATCATA TGATCAGCTCATTCAGGCTCAGCAGTACCAACAGCATCAGGGTCCATCCCAATTCAGTGT AATACAGATGAACGATCCAGATTTGACTTCTCTTGCACTTGGAATTGATCTAACAACACT TGGTTTGAATTTGAACTCTGCTGAGAATTTGTACAAGACTTTTGGTTCCCCATGGTCTGA TGAGCCTGCCAAAGGGGATCCAGAATTTACTGCACCCCAATGTTATTATGCGAAGCAACC CCCACCTTTAAATCAAGCATACTTCTCAAAGTTTCAGCTGGATACTTTGTTTTACATATT TTACAGCATGCCAAAAGATGAAGCGCAACTGTATGCTGCAAATGAACTGTATAACCGCGG ATGGTTTTATCACAGAGAACATCGGTTGTGGTTTATGAGGGTCGCCAACATGGAGCCTCT TGTCAAGACGAATGCATATGAGAGAGGGTCTTACATTTGTTTTGATCCAAACACATGGGA GACAATCCGTAAGGATAACTTTGTCGTCCACTATGAAATGTTGGAAAAAAGACCTGTTTT ACCTCAACACTGATATGGAGCGCCAGTTCATAACTGTACATTTTCAATATATTCCTTAAT CTAGGAGCCAGGTAGATCACCTGTAGTTTCTGCTCGATTGGGCTGTTGGCAGCAATTGTT AAAATTAGAGTTGTCTTAGTCGTTTAGTTCCTTGTTTCTTGTAGACGTCACAAGTCGGAA AGAAATGTATTTCTCAGAATTTCATTGGTGGAAATGCCATCATTAAGGCACTGTTGATAG AGTAGTTGCTGAAAAGACATTGTGGAAACTGGCTTGTTCTTCAATCACCAACATTGTGGT ACAAAGAGAACAAGAATATTAGAAGCACAATCAAAATAAAAAGCAAGTTAATTTCGAGTA TA