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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g072200.2.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

ATGGCATCACTAGTTTCAAGTTGGTCTTCAGAAGTGAAATCAATTCCAGAAAAATATGTT
GTTCCATTAGAAAAAAGAGTAAATGCAGATGTACCAATTGGTAAACATATTCCAGTTATT
GATTTATCACAATCTTCAACTCATTGTATTCAACAAATCATCAAAGCTTCTGCTGACTTT
GGTCTCTTTCAGGTGATCAATCATGGAGTGTCAGAAACCCTAATGGTTGATGCATTATCT
GTGTGCAAAGAGTTCTTCAACTTGCCAATTGAGGACAAAGCAAAATTTGTTGAGAAAGAT
GAGGGCTTAAGTGATTTTGAACCATCAATTGACCAAAGGCCAAAGCTTTACATTGAAAAA
GAATACACACCAAACAAGGATGGTTCAAACACTAATAATGTCAAGGACACTGTCTTTTGG
AAAGACACTTTTGGACATGGTTGTCATCCTCTCACTCAAGATGTCATCAATTCTTGGCCT
GAAAAACCACAAAAATATAGAGAAGTGATTGGTGAATATGCATTGGAACTAAGAAAATTG
AGCTTAAGGATTTTGGACTTGATGTGTGAAGGACTTGGGCTTGAAGTTGGATATTTTAGC
CAAGAACATAGCCAAACTCAACTCATGGTGACCCATCACTACCCACAATGCCCTGATCCA
AACTCAACAATAGGTATAGGTGAACATTGTGATGGTGCACTTATCAATTTGGTCCAACAA
GAACTAAGTGGATTGCATGTGAGAGACAAAGATGGCAAATGGTTTGGTGTTGAACCAATT
CCTGGTGCACTTGTTGTTATCAATGGTCTGATCTTAAAGGTTGTCACAAATGGAAAGCTA
TCAGCTGGAGTGCATAGAGTTGTGACAAATTCAACATCTGATAGAACATCATTGGGCAGC
TTAATAAGTCCAATTGAGTGCACAATTGAACCTGCAAAAACACTTATAAATGAGAAAAAT
CCACCTTTGTTTAAATCATTTTCATATACAGAATATTTGGGATATTATTTCAGTGACACA
ACTGAAATTGAAGCAGCATTGAAACCATATAAGCTCTAA

Peptide Sequence

PEP ID

Solyc11g072200.2.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

MASLVSSWSSEVKSIPEKYVVPLEKRVNADVPIGKHIPVIDLSQSSTHCIQQIIKASADF
GLFQVINHGVSETLMVDALSVCKEFFNLPIEDKAKFVEKDEGLSDFEPSIDQRPKLYIEK
EYTPNKDGSNTNNVKDTVFWKDTFGHGCHPLTQDVINSWPEKPQKYREVIGEYALELRKL
SLRILDLMCEGLGLEVGYFSQEHSQTQLMVTHHYPQCPDPNSTIGIGEHCDGALINLVQQ
ELSGLHVRDKDGKWFGVEPIPGALVVINGLILKVVTNGKLSAGVHRVVTNSTSDRTSLGS
LISPIECTIEPAKTLINEKNPPLFKSFSYTEYLGYYFSDTTEIEAALKPYKL*

Transcript Sequence

Transcript ID

Solyc11g072200.2.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

AATCATCACTATAAATAAGTCCATAATACAACCTTGGAACCTCACAAACCAATTATTGCT
ATTATTATTATTATTATTATCAAAGCAATTAATTAAATGGCATCACTAGTTTCAAGTTGG
TCTTCAGAAGTGAAATCAATTCCAGAAAAATATGTTGTTCCATTAGAAAAAAGAGTAAAT
GCAGATGTACCAATTGGTAAACATATTCCAGTTATTGATTTATCACAATCTTCAACTCAT
TGTATTCAACAAATCATCAAAGCTTCTGCTGACTTTGGTCTCTTTCAGGTGATCAATCAT
GGAGTGTCAGAAACCCTAATGGTTGATGCATTATCTGTGTGCAAAGAGTTCTTCAACTTG
CCAATTGAGGACAAAGCAAAATTTGTTGAGAAAGATGAGGGCTTAAGTGATTTTGAACCA
TCAATTGACCAAAGGCCAAAGCTTTACATTGAAAAAGAATACACACCAAACAAGGATGGT
TCAAACACTAATAATGTCAAGGACACTGTCTTTTGGAAAGACACTTTTGGACATGGTTGT
CATCCTCTCACTCAAGATGTCATCAATTCTTGGCCTGAAAAACCACAAAAATATAGAGAA
GTGATTGGTGAATATGCATTGGAACTAAGAAAATTGAGCTTAAGGATTTTGGACTTGATG
TGTGAAGGACTTGGGCTTGAAGTTGGATATTTTAGCCAAGAACATAGCCAAACTCAACTC
ATGGTGACCCATCACTACCCACAATGCCCTGATCCAAACTCAACAATAGGTATAGGTGAA
CATTGTGATGGTGCACTTATCAATTTGGTCCAACAAGAACTAAGTGGATTGCATGTGAGA
GACAAAGATGGCAAATGGTTTGGTGTTGAACCAATTCCTGGTGCACTTGTTGTTATCAAT
GGTCTGATCTTAAAGGTTGTCACAAATGGAAAGCTATCAGCTGGAGTGCATAGAGTTGTG
ACAAATTCAACATCTGATAGAACATCATTGGGCAGCTTAATAAGTCCAATTGAGTGCACA
ATTGAACCTGCAAAAACACTTATAAATGAGAAAAATCCACCTTTGTTTAAATCATTTTCA
TATACAGAATATTTGGGATATTATTTCAGTGACACAACTGAAATTGAAGCAGCATTGAAA
CCATATAAGCTCTAAGAGAAGAGGGAATTGATAATTTTAATCAAA