Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g071830.2.1
CDS Infomation

DnaJ protein homolog (AHRD V3.3 *** DNJH_CUCSA)
Sequence

ATGTTTGGAAGAGGAGGGAAAAAAAAGAGTGATAACACAAAGTTTTATGAAATCTTGGGT
GTTTCCAAGAATGCTTCAGAAGATGAAATCAAGAAAGCTTATAGAAAAGCTGCTATGAAG
AATCACCCTGATAAGGGTGGTGATCCTGAAAAGTTTAAGGAGCTAGCTCAAGCTTATGAG
GTCTTGAGTGACTCACAGAAGCGTGAGATTTATGATCAGTATGGAGAAGAAGCACTGAAA
GAAGGAATGGGTGGTGGTGGTGGCACACATGATCCATTTGACCTCTTTAATTCCTTCTTT
AGTGGAAGTCCTTTTGGAGGTGGTGGTCGTAGAGGACAAAGAGAGAGGAGGGGTGACGAT
GTAGTGCATCCATTGAAGGTGTCGCTTGAGGACCTATACAATGGGATGACCAAGAAACTA
TCGCTTTCGCGCAATGTTATTTGCTCGAAGTGTAGTGGCAAGGGGTCGAAGTCTGGTGAA
TCAATGAAGTGTTCTGGTTGTGAAGGTACTGGTATGAAGGTTTCAATCAGACAGCTTGGG
CCTGGAATGATCCAGCAAATGCAGCAGCCTTGTAATAAATGCAAGGGTACTGGAGAGACA
ATTGACGATAAGGATCGTTGTCCTCAATGCAAAGGTAAAAAAGTGGTACCAGAGAAGAAA
GTCATTGAAGTCCATGTTGAAAAAGGAATGCAAAATGGACAGAAAATTACATTCCCTGGC
GAGGCTGATGAAGCGCCTGATACAGTTACTGGAGATGTGGTTTTCGTTCTCCAACAGAAA
GATCACCCGAAGTTCAAGAGGAAGGGTGATGACCTGTTTGTTGATCACACATTGACCTTA
ACTGAGGCACTGTGTGGTTTCCAGTTCATATTGGCACACTTGGATGGCAGACGGCTCCTC
GTAAAGTCAAACCCTGGAGAAGTTGTTAAACCTGATCAATTCAAGGCTATCAATGATGAA
GGAATGCCAGTTTACCAGAGGCCATTCATGAAGGGTAAACTGTACATTCATTTCATCGTG
GAATTCCCGGATTCGTTGAGCCTGCCACAGGTGCAGCTTCTGGAGGCAATGTTACCATCA
AGGCCTACATCACAGTACTCTGACATGGAACTGGATGAATGTGAGGAGACCACATTGCAT
GATGTGAATATGGAGGAAGAAATGAGAAGGAAACAAGCTGCACAACAAGAAGCATATGAT
GAGGATGAAGAGATGTCTGGTGGTGGAGGACAGAGAGTACAGTGTGCTCAACAGTAG

Peptide Sequence

PEP ID

Solyc11g071830.2.1
PEP Infomation

DnaJ protein homolog (AHRD V3.3 *** DNJH_CUCSA)
Sequence

MFGRGGKKKSDNTKFYEILGVSKNASEDEIKKAYRKAAMKNHPDKGGDPEKFKELAQAYE
VLSDSQKREIYDQYGEEALKEGMGGGGGTHDPFDLFNSFFSGSPFGGGGRRGQRERRGDD
VVHPLKVSLEDLYNGMTKKLSLSRNVICSKCSGKGSKSGESMKCSGCEGTGMKVSIRQLG
PGMIQQMQQPCNKCKGTGETIDDKDRCPQCKGKKVVPEKKVIEVHVEKGMQNGQKITFPG
EADEAPDTVTGDVVFVLQQKDHPKFKRKGDDLFVDHTLTLTEALCGFQFILAHLDGRRLL
VKSNPGEVVKPDQFKAINDEGMPVYQRPFMKGKLYIHFIVEFPDSLSLPQVQLLEAMLPS
RPTSQYSDMELDECEETTLHDVNMEEEMRRKQAAQQEAYDEDEEMSGGGGQRVQCAQQ*

Transcript Sequence

Transcript ID

Solyc11g071830.2.1
Transcript Infomation

DnaJ protein homolog (AHRD V3.3 *** DNJH_CUCSA)
Sequence

TAAGAGGGCCAAAATGTAACATAAATCATAATATAGTAGATCTAAGTGTAATTTCCTCAA
ACTCTAGAAATTGTTTTTTCCTCAATGTGAACAATCTAGAATAAGCAGCAAGAAAGAGAA
TTCTAGAGCATTCTCCACTATTCTCAATTTCTCATTTCACCTGAGCCTTCAAAGATGTGT
ATATATACACCCCTTTTGAGTCCTTGTTGGAGTCAAGTATTTGGGTGTTCTGTTCTTTTC
ATACTGTTCTTGAAAAGAAGTTGAAATTGAAAAGGATGTTTGGAAGAGGAGGGAAAAAAA
AGAGTGATAACACAAAGTTTTATGAAATCTTGGGTGTTTCCAAGAATGCTTCAGAAGATG
AAATCAAGAAAGCTTATAGAAAAGCTGCTATGAAGAATCACCCTGATAAGGGTGGTGATC
CTGAAAAGTTTAAGGAGCTAGCTCAAGCTTATGAGGTCTTGAGTGACTCACAGAAGCGTG
AGATTTATGATCAGTATGGAGAAGAAGCACTGAAAGAAGGAATGGGTGGTGGTGGTGGCA
CACATGATCCATTTGACCTCTTTAATTCCTTCTTTAGTGGAAGTCCTTTTGGAGGTGGTG
GTCGTAGAGGACAAAGAGAGAGGAGGGGTGACGATGTAGTGCATCCATTGAAGGTGTCGC
TTGAGGACCTATACAATGGGATGACCAAGAAACTATCGCTTTCGCGCAATGTTATTTGCT
CGAAGTGTAGTGGCAAGGGGTCGAAGTCTGGTGAATCAATGAAGTGTTCTGGTTGTGAAG
GTACTGGTATGAAGGTTTCAATCAGACAGCTTGGGCCTGGAATGATCCAGCAAATGCAGC
AGCCTTGTAATAAATGCAAGGGTACTGGAGAGACAATTGACGATAAGGATCGTTGTCCTC
AATGCAAAGGTAAAAAAGTGGTACCAGAGAAGAAAGTCATTGAAGTCCATGTTGAAAAAG
GAATGCAAAATGGACAGAAAATTACATTCCCTGGCGAGGCTGATGAAGCGCCTGATACAG
TTACTGGAGATGTGGTTTTCGTTCTCCAACAGAAAGATCACCCGAAGTTCAAGAGGAAGG
GTGATGACCTGTTTGTTGATCACACATTGACCTTAACTGAGGCACTGTGTGGTTTCCAGT
TCATATTGGCACACTTGGATGGCAGACGGCTCCTCGTAAAGTCAAACCCTGGAGAAGTTG
TTAAACCTGATCAATTCAAGGCTATCAATGATGAAGGAATGCCAGTTTACCAGAGGCCAT
TCATGAAGGGTAAACTGTACATTCATTTCATCGTGGAATTCCCGGATTCGTTGAGCCTGC
CACAGGTGCAGCTTCTGGAGGCAATGTTACCATCAAGGCCTACATCACAGTACTCTGACA
TGGAACTGGATGAATGTGAGGAGACCACATTGCATGATGTGAATATGGAGGAAGAAATGA
GAAGGAAACAAGCTGCACAACAAGAAGCATATGATGAGGATGAAGAGATGTCTGGTGGTG
GAGGACAGAGAGTACAGTGTGCTCAACAGTAGATGTAGAAAGATTTACCAGTTTGAACTT
TGCTTATAGTTTAGTTTGGTTTACTGTTTTCTGTTGTTTTGGAAATGACATGTTTTGGGA
AGTCAAAAAACTGATGCTTTAGTGAAATAGAAATATTATTTTCTTGGGGAACAATT