Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g071670.2.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RN92_RICCO)
Sequence	ATGGCTCGAATTTTCTGCTACAAGAATCTCTCTATTGCTTTTCAATTGAAAAGGCCAACG ACCCATTTTCATCCTTCTTCTCTCCATTCTCAATCCTCAGCTCCTATAGACAAAGAAGTT GAAACTCTTTACCGTATCATAACAATAACACAGACACCAGAAGGACTGAAACAAGCACTG AAATCATCACAAATCAAATTATCAAACGACTTAATCGACAAAGTTCTCAAAAGGGTACGT TTTTCTCATTCAAACCCGTTACAAGCTTTAGAGTTCTTTAAATATGCAGATAAGCGAAAG GGGTTTTACCATACTGGTTTTTCTTTAGATACAATTTTGTATGTACTTGGTAGGAATCGT AAATTCGATAAGATTTGGGAGGTTTTAGTGGAAATGAAGAGAAAAGATCAATCTTTGATA ACCCCCAGAACAGTTCAAGTTGTTTTAGGTAGAGTTGCTAAGGTTTGCTCTGTTAGAGAA ACTGTTGAGTCTTTTTGGGGTTTTAAGAGACTGTTGAATGAGTTTGGTGTTGATTGTTTT AATGCATTGTTGAGGGCTTTGTGTCAGGAGAAGAGTATGAGTGATGCTAGGAATGTGTAT CATAGGTTGAAGTACAAGTTTAGGCCAAATAACCAGACATTTAATATACTTTTGTCTGGT TGGAAGTCGTCGGAGGATGCGGAGGTTTTCTTTAAGGAGATGAGGGATTTGGGCGTTGAA CCGGATGTTGTTTCGTTTAATTGTTTGGTGGATGTGTATTGTAAAGGGAGAGAGATGGAG AAGGCTTTTAGGGTGGTGGAGGAGATGAGGGAGAAGGATATTACTCCTGATGTGATAACT TATACAAGTTTAATTGGAGGGTTGGGGTTGGTTGGACAACCTGATAAGGCGAGGCACATT TTGAAGGAGATGAGGGAGTATGGATGTTATCCGGATGCGGCTGCTTATAATGCTGCGGTT AGGAACTTCTGCATTGCGAAGAGGATCGGGGATGCATACAGTTTGATGGATGAGATGGTT AGAAATGGTTTGAGCCCCAATGCCACTACATATAATGTGTTCTTAAGGTCATTTTTTTGG ATAAATGATTTGAAAAGTTCATGGACTTTGTACCAGAGGATGAAGGAGACTGGGTGCTTA CCGAGTACACAGTCGTGTATGTTCCTGATCAGGTTGAGCAGGAGACATGAGAAAGTGGAG ATGGCACTTGAGTTGTGGGATGACATGATGGAGAGAGGATTTGGCTCATATATTTTGGTC TCTGATGTTTTGTTTGATTTGCTCTGTGATTTGGGAAAGTTGGCGGAGGCAGAAAGATGT TTCTTGCAAATGGTAAATAAAGGGCAAAAACCAAGTAATGTTTCCTTTAGGAGGATCAAG GTGCTTATGGAATTGGCTAATAAACAGGAGGCTCTTAAGCTTTTGTCAGAAAAGATGGCT GCTTTTCGTTCCTCCACACAACTGATCCAACACGATAAAGTGGAATATGAACAATCAAGT TGA

Peptide Sequence

PEP ID	Solyc11g071670.2.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RN92_RICCO)
Sequence	MARIFCYKNLSIAFQLKRPTTHFHPSSLHSQSSAPIDKEVETLYRIITITQTPEGLKQAL KSSQIKLSNDLIDKVLKRVRFSHSNPLQALEFFKYADKRKGFYHTGFSLDTILYVLGRNR KFDKIWEVLVEMKRKDQSLITPRTVQVVLGRVAKVCSVRETVESFWGFKRLLNEFGVDCF NALLRALCQEKSMSDARNVYHRLKYKFRPNNQTFNILLSGWKSSEDAEVFFKEMRDLGVE PDVVSFNCLVDVYCKGREMEKAFRVVEEMREKDITPDVITYTSLIGGLGLVGQPDKARHI LKEMREYGCYPDAAAYNAAVRNFCIAKRIGDAYSLMDEMVRNGLSPNATTYNVFLRSFFW INDLKSSWTLYQRMKETGCLPSTQSCMFLIRLSRRHEKVEMALELWDDMMERGFGSYILV SDVLFDLLCDLGKLAEAERCFLQMVNKGQKPSNVSFRRIKVLMELANKQEALKLLSEKMA AFRSSTQLIQHDKVEYEQSS*

Transcript Sequence

Transcript ID	Solyc11g071670.2.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RN92_RICCO)
Sequence	ATGGCTCGAATTTTCTGCTACAAGAATCTCTCTATTGCTTTTCAATTGAAAAGGCCAACG ACCCATTTTCATCCTTCTTCTCTCCATTCTCAATCCTCAGCTCCTATAGACAAAGAAGTT GAAACTCTTTACCGTATCATAACAATAACACAGACACCAGAAGGACTGAAACAAGCACTG AAATCATCACAAATCAAATTATCAAACGACTTAATCGACAAAGTTCTCAAAAGGGTACGT TTTTCTCATTCAAACCCGTTACAAGCTTTAGAGTTCTTTAAATATGCAGATAAGCGAAAG GGGTTTTACCATACTGGTTTTTCTTTAGATACAATTTTGTATGTACTTGGTAGGAATCGT AAATTCGATAAGATTTGGGAGGTTTTAGTGGAAATGAAGAGAAAAGATCAATCTTTGATA ACCCCCAGAACAGTTCAAGTTGTTTTAGGTAGAGTTGCTAAGGTTTGCTCTGTTAGAGAA ACTGTTGAGTCTTTTTGGGGTTTTAAGAGACTGTTGAATGAGTTTGGTGTTGATTGTTTT AATGCATTGTTGAGGGCTTTGTGTCAGGAGAAGAGTATGAGTGATGCTAGGAATGTGTAT CATAGGTTGAAGTACAAGTTTAGGCCAAATAACCAGACATTTAATATACTTTTGTCTGGT TGGAAGTCGTCGGAGGATGCGGAGGTTTTCTTTAAGGAGATGAGGGATTTGGGCGTTGAA CCGGATGTTGTTTCGTTTAATTGTTTGGTGGATGTGTATTGTAAAGGGAGAGAGATGGAG AAGGCTTTTAGGGTGGTGGAGGAGATGAGGGAGAAGGATATTACTCCTGATGTGATAACT TATACAAGTTTAATTGGAGGGTTGGGGTTGGTTGGACAACCTGATAAGGCGAGGCACATT TTGAAGGAGATGAGGGAGTATGGATGTTATCCGGATGCGGCTGCTTATAATGCTGCGGTT AGGAACTTCTGCATTGCGAAGAGGATCGGGGATGCATACAGTTTGATGGATGAGATGGTT AGAAATGGTTTGAGCCCCAATGCCACTACATATAATGTGTTCTTAAGGTCATTTTTTTGG ATAAATGATTTGAAAAGTTCATGGACTTTGTACCAGAGGATGAAGGAGACTGGGTGCTTA CCGAGTACACAGTCGTGTATGTTCCTGATCAGGTTGAGCAGGAGACATGAGAAAGTGGAG ATGGCACTTGAGTTGTGGGATGACATGATGGAGAGAGGATTTGGCTCATATATTTTGGTC TCTGATGTTTTGTTTGATTTGCTCTGTGATTTGGGAAAGTTGGCGGAGGCAGAAAGATGT TTCTTGCAAATGGTAAATAAAGGGCAAAAACCAAGTAATGTTTCCTTTAGGAGGATCAAG GTGCTTATGGAATTGGCTAATAAACAGGAGGCTCTTAAGCTTTTGTCAGAAAAGATGGCT GCTTTTCGTTCCTCCACACAACTGATCCAACACGATAAAGTGGAATATGAACAATCAAGT TGA