Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g070150.2.1
CDS Infomation

Histidine phosphotransfer protein (AHRD V3.3 *** I4IY29_POPCA)
Sequence

ATGGAGAATCAAAAGAAACGCCAAGCTGCTTACATGAAGAGAAGCCTCTTGGATCAGGGA
TACCTTGATGAACAATTTATTCATCTTGAAGAGTTGCAAGATGATGCAAACCCTAACTTT
GTTGAAGAAGTTGTCAAGTTGTTTTACACAGATTCAGCTAGATATGTTCGAAATATTGAA
CTTGCATTGGAAAATGGACCCTATGATTTTGCTAGGCTGGATAATATGATGTACCAATTC
AAGGGTAGCAGCTCAAGCATCGGTGCCAGAAGAGTAAAAAGACAATGTTCTCAGTTTCAG
GAATACTGTAATGCAAAAAATATAGACGGGTGCAGAAACATTTTCCAAGGAGTGAAGCAA
GAGTATGCTACTCTAAAGACTAAGCTTGAGACTTACTTTCAGATGGAAAGATAA

Peptide Sequence

PEP ID

Solyc11g070150.2.1
PEP Infomation

Histidine phosphotransfer protein (AHRD V3.3 *** I4IY29_POPCA)
Sequence

MENQKKRQAAYMKRSLLDQGYLDEQFIHLEELQDDANPNFVEEVVKLFYTDSARYVRNIE
LALENGPYDFARLDNMMYQFKGSSSSIGARRVKRQCSQFQEYCNAKNIDGCRNIFQGVKQ
EYATLKTKLETYFQMER*

Transcript Sequence

Transcript ID

Solyc11g070150.2.1
Transcript Infomation

Histidine phosphotransfer protein (AHRD V3.3 *** I4IY29_POPCA)
Sequence

ACTACAAAATAGTAAAAGAAAAGGAGAAGAGGATCGGAACAAATAAGATGTTCGAAGCTA
GAACTCTGCTCTCTTATGTGAAAGAGAGAAACGTTTGACAACCTAGCTACTAACCTTCTA
TCTAATTCCCGATCTTTGTGCTATCCTATTTACGATAGTTGATTGTCGGCGATAACATAG
TAAAAGAATAATTTTGAAAAGGTTTTTTAACTCGATTACGAATAAAGTAGAGAGTGGAAC
CATCGAGGAGTTCATTTTGAATAATGATAATAAATCTAAGTGAAGAATCAAACTTGAAAC
GAATATAATAAAGGGGCGTAAGCTTATTAGTGAACACAACACCCCAGTTATTTGTTGCCT
ATGTGTTACTAACTTCTTAGTTTTTATGACTTATGGAGATTTATAAATAATTGTAGCTGA
ATTTTTAGTTTTTCTTGTTCAATTTTGGCAATGCTTTATTTAAATTAAGAATTTATTGAA
AATCAGATCTTTATCTTTATGAGATAAGGATAACATTTATATACGTACATTTTATAATCT
CGAGATCCTACTTTTTAACTCGGGGTTTTTTAAAAAATGGAGAATCAAAAGAAACGCCAA
GCTGCTTACATGAAGAGAAGCCTCTTGGATCAGGGATACCTTGATGAACAATTTATTCAT
CTTGAAGAGTTGCAAGATGATGCAAACCCTAACTTTGTTGAAGAAGTTGTCAAGTTGTTT
TACACAGATTCAGCTAGATATGTTCGAAATATTGAACTTGCATTGGAAAATGGACCCTAT
GATTTTGCTAGGCTGGATAATATGATGTACCAATTCAAGGGTAGCAGCTCAAGCATCGGT
GCCAGAAGAGTAAAAAGACAATGTTCTCAGTTTCAGGAATACTGTAATGCAAAAAATATA
GACGGGTGCAGAAACATTTTCCAAGGAGTGAAGCAAGAGTATGCTACTCTAAAGACTAAG
CTTGAGACTTACTTTCAGATGGAAAGATAAGCTTAACTGATGTTGAAAGCAAGCATCAGA
TTCGAAGTGAACAAGCCCATCATCATGACCTTCCTTCAACTAGCTGATATATATATCCAA
TGAAGGATAGTTGGATATTGTACCATATATAAATATTCTTATCTTGAAATAATAATAACT
ATATGGCATTTAAAAAAATGTATTTGCCACTCTGTTGTATAAAACCTGTCAAAGCTTATT
AATGCAAAGTTCATGTTTTCAATAGAACATCTATTTCTGTCTTCTATTTCCAGAAAAATA
AATAATAATTGACACCCTCAGGCCTCCATGACAGTGTCGTAAATACTTGTCCACCCA