Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g070040.2.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S2U8_RICCO)
Sequence	ATGTTCAAATTCCTCCAACTGTTGTGCCAAATGAGGAAAAAAGAATTTTTTTTTTCAGAT TTTGGTGCTTGCTACAGCCCATTGCTAGTACAAGTAGCTAAGTTGAATCGTCTTTTGATA TGTGTGAATTGCTTCTATCTGAAAATGAACAAAAGAACAATGTTCAACTTTAACATATCA AGAACCCAAAAGATCGAATGTTTTTTTTTTCTTTCTACAAGGAGGATCATGTTGCGACGA TTTCATCAGAAAGTGTGTGGTAGAACGATGAATTTTACCCGAATGTATAGTTCTAAAGAA ACAACGGAAGTTAAACTTGATCCACTGACAAGACTTTGTAAAATTATGATGTCTTGTCCA AAGGTGGGGCTCGACATAGAGCTTGACCAAAGTGGGATTAGGGTATTACCGGAGATGGTT GAGGATGTCCTTAAGAGATTTGAGAATGCTGGAATGCTTGCGTATCGTTTCTTTGAATGG GCTGGTAAACAACATAATTATGAGCATAGTACTAGAGCCTACCACTCCATGATTGGATCT CTTGCCAAGATAAGGCAATATCAGATGATGTGGGATCTTGTAAATGAGATGAAAACCAAG AGAATGCTTAATATTGAGACATTTTGCATAATCATGAGAAAATATGCTAGGGCTCAAAAA GTAGAGGAGACTCTATACACTTTCCATATCATGAACAAGTTCGATGTGCCTCCCAACCTT GCGGCTTTCAACGGCTTATTGAGTGCTCTATGCAAATCGAAGAATGTGGAAAAAGCTCAG GAGATTTTCGATACTAAGAAGAATGAATTTACTCCCGATTCAAAAACATATAGCATTTTG ATTGAGGGATGGGGAAGGGCTCCAAATCTTCCCAAGGCAAGGGAGGTTTACAGGGAAATG ATTGAGGTAGGCTGTAATCCGGACATTGTGACTTACGGGATCATGGTTGACATACTTTGC AAGGCCGGCAGGGTTGATGAGGCTGTTGAAATTGTCAAGGAGATGGACTTCAGCGGTTGC AGGCCAACGTCCTTTATTTATAGTGTTTTAGTCCATACATATGGGCTAGAAAATCGGATT GAAGATGCGATAGATACATTTCTTGAAATGGAAAAAAATGGTGTTGAGGCTGATGTAGCT GTATATAACTCACTAATTAGTGCTTTCTGTAAGGTAAATAAGTTCCAAAATGTCTATATG GTTCTGAATGACATGCAAATCAAAGGGGTGTCTCCCAATGCAAGGACCTGCAATATTATT CTCAGTGGCTTGATTGCTCGAGGTGAGACTGATGATGCTTTCAAGATTTTCCGCAGGATG CTCAAAATTTGTGATCCTGATGCTGACACGTATACTATGATGATAAAGATGTTTTGTGAG AAGAATGAGATGAAAATGGCTCGTAAAGTGTGGAAATATATGAAACGCAAGCAATTTGTT CCCAGTATGCATACTTTTTCTGCACTTGTCAATGGATTGTGCGACGATGCAGATGCCCCT GGTGCCTGTGTGTTAATGGAAGAGATGATCGAGAAAGGAATGCGCCCTGGTAGGATAACA TTTGAAAAATTAAGGAAACTACTTCTCAAGGAAGAGAGGGAAGATGTACTTGAATTCCTT CAGGAGAAACTAAATCTTATGTATAATCTGCTGTTGTTGAATCTGACCTCTAGAGTCAGA ATATCCAAGTGTCTTGTACTGTTTCAGCAACGGATAAAGATATACATACTCATTTGGAGC ACTTGTCAACTCTATTACGTTGGAAAAGTGAGGCCAGTTCCTTGTCAAATACTGGAGTTT TGGAAACGGGGTAGGACACAGTTATCTTGCTTCAACATGGTTATCTCTGACTTCAATACT TCTTCTGGATGTGGCTAG

Peptide Sequence

PEP ID	Solyc11g070040.2.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S2U8_RICCO)
Sequence	MFKFLQLLCQMRKKEFFFSDFGACYSPLLVQVAKLNRLLICVNCFYLKMNKRTMFNFNIS RTQKIECFFFLSTRRIMLRRFHQKVCGRTMNFTRMYSSKETTEVKLDPLTRLCKIMMSCP KVGLDIELDQSGIRVLPEMVEDVLKRFENAGMLAYRFFEWAGKQHNYEHSTRAYHSMIGS LAKIRQYQMMWDLVNEMKTKRMLNIETFCIIMRKYARAQKVEETLYTFHIMNKFDVPPNL AAFNGLLSALCKSKNVEKAQEIFDTKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYREM IEVGCNPDIVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLENRI EDAIDTFLEMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLNDMQIKGVSPNARTCNII LSGLIARGETDDAFKIFRRMLKICDPDADTYTMMIKMFCEKNEMKMARKVWKYMKRKQFV PSMHTFSALVNGLCDDADAPGACVLMEEMIEKGMRPGRITFEKLRKLLLKEEREDVLEFL QEKLNLMYNLLLLNLTSRVRISKCLVLFQQRIKIYILIWSTCQLYYVGKVRPVPCQILEF WKRGRTQLSCFNMVISDFNTSSGCG*

Transcript Sequence

Transcript ID	Solyc11g070040.2.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S2U8_RICCO)
Sequence	ATGTTCAAATTCCTCCAACTGTTGTGCCAAATGAGGAAAAAAGAATTTTTTTTTTCAGAT TTTGGTGCTTGCTACAGCCCATTGCTAGTACAAGTAGCTAAGTTGAATCGTCTTTTGATA TGTGTGAATTGCTTCTATCTGAAAATGAACAAAAGAACAATGTTCAACTTTAACATATCA AGAACCCAAAAGATCGAATGTTTTTTTTTTCTTTCTACAAGGAGGATCATGTTGCGACGA TTTCATCAGAAAGTGTGTGGTAGAACGATGAATTTTACCCGAATGTATAGTTCTAAAGAA ACAACGGAAGTTAAACTTGATCCACTGACAAGACTTTGTAAAATTATGATGTCTTGTCCA AAGGTGGGGCTCGACATAGAGCTTGACCAAAGTGGGATTAGGGTATTACCGGAGATGGTT GAGGATGTCCTTAAGAGATTTGAGAATGCTGGAATGCTTGCGTATCGTTTCTTTGAATGG GCTGGTAAACAACATAATTATGAGCATAGTACTAGAGCCTACCACTCCATGATTGGATCT CTTGCCAAGATAAGGCAATATCAGATGATGTGGGATCTTGTAAATGAGATGAAAACCAAG AGAATGCTTAATATTGAGACATTTTGCATAATCATGAGAAAATATGCTAGGGCTCAAAAA GTAGAGGAGACTCTATACACTTTCCATATCATGAACAAGTTCGATGTGCCTCCCAACCTT GCGGCTTTCAACGGCTTATTGAGTGCTCTATGCAAATCGAAGAATGTGGAAAAAGCTCAG GAGATTTTCGATACTAAGAAGAATGAATTTACTCCCGATTCAAAAACATATAGCATTTTG ATTGAGGGATGGGGAAGGGCTCCAAATCTTCCCAAGGCAAGGGAGGTTTACAGGGAAATG ATTGAGGTAGGCTGTAATCCGGACATTGTGACTTACGGGATCATGGTTGACATACTTTGC AAGGCCGGCAGGGTTGATGAGGCTGTTGAAATTGTCAAGGAGATGGACTTCAGCGGTTGC AGGCCAACGTCCTTTATTTATAGTGTTTTAGTCCATACATATGGGCTAGAAAATCGGATT GAAGATGCGATAGATACATTTCTTGAAATGGAAAAAAATGGTGTTGAGGCTGATGTAGCT GTATATAACTCACTAATTAGTGCTTTCTGTAAGGTAAATAAGTTCCAAAATGTCTATATG GTTCTGAATGACATGCAAATCAAAGGGGTGTCTCCCAATGCAAGGACCTGCAATATTATT CTCAGTGGCTTGATTGCTCGAGGTGAGACTGATGATGCTTTCAAGATTTTCCGCAGGATG CTCAAAATTTGTGATCCTGATGCTGACACGTATACTATGATGATAAAGATGTTTTGTGAG AAGAATGAGATGAAAATGGCTCGTAAAGTGTGGAAATATATGAAACGCAAGCAATTTGTT CCCAGTATGCATACTTTTTCTGCACTTGTCAATGGATTGTGCGACGATGCAGATGCCCCT GGTGCCTGTGTGTTAATGGAAGAGATGATCGAGAAAGGAATGCGCCCTGGTAGGATAACA TTTGAAAAATTAAGGAAACTACTTCTCAAGGAAGAGAGGGAAGATGTACTTGAATTCCTT CAGGAGAAACTAAATCTTATGTATAATCTGCTGTTGTTGAATCTGACCTCTAGAGTCAGA ATATCCAAGTGTCTTGTACTGTTTCAGCAACGGATAAAGATATACATACTCATTTGGAGC ACTTGTCAACTCTATTACGTTGGAAAAGTGAGGCCAGTTCCTTGTCAAATACTGGAGTTT TGGAAACGGGGTAGGACACAGTTATCTTGCTTCAACATGGTTATCTCTGACTTCAATACT TCTTCTGGATGTGGCTAGTTCCTTTCCGTTTTCAGTTGATTAGTAAAGGAAACTTCAGCA AGTGAAAGATGGTCGATACAAGTGGACAAAAGCCAAACAGCTTTACAATCAAGGGCCCTC GATCTGCATACATGAGCTGATTTCGGTACCTCCTGGAAGGAACTAGTTGAAGAGGTGAAA GAACGCTAATGCTTCATCATCTAAGGATTCACGGTTGCAATGGGACTTTCGAAACACAAT GAGTTGTTCCCATATGCACTTGCATATTTCCGTTCAAAAAGTAAAAGGAGCTCAATCAAT CAAGCAAACTCTACACGCAATGTGGCTGGCCAGGAGAGAAGTAAAACCAACTAGACAGCA GAGAGAGAAAGAAGAGCTTGGGGAAATAGCATAGTAACCAACACCAATCACAGTGAAAAA AAAAATAGATCCAGTCAAACAGTTTTACCAGATTTCACGTTAGATGACTAAAAAAAAAGC TATTCTGAAAAACCCTGAAAGACAATACTGACATCAAATAACAATGGTTTTCTTCATGGA AGTAACCATCTAATCTCGTGCAAGTAGTTCGTGCGCAATGTACATTAAAAACCAACACAC CCATTCCTCAGCAGTTAGCAGCTTGCACTCTCTACATTGAGAGTGCAAAACAGTTAACAC TTCTTCACTATAGAGCAATGTTGGATCTACCTCACTACATTAAAAGTGGCACTTGGTTTG GAAATCATCACTGGACACTCCCCCTTTTCATCATACTCAGCGAACTCATCTCCGGACAAA TCAATGCCTTCAAATTTCGTTCCCTCAAGCTGCATTAAGTGAATCAAATTAGAACTGGCA CAACATCTCCCATAACACAACCTAAAAATTGGGAAATGTGGATA