Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g069800.1.1
CDS Infomation	Allene oxide synthase (AHRD V3.3 *** Q8RW06_SOLTU)
Sequence	ATGGCATTAACTTTATCTTTTTCTCTTCCTCTTCCTTCTCTTCACCAAAAAATTCCATCA AAATACTCTACATTTCGTCCTATTATTGTTTCTTTATCCGATAAATCAACAATCGAAATA ACCCAACCTATAAAATTATCTACCAGGACTATACCCGGCGACTATGGGTTGCCGGGTATT GGTCCATGGAAAGATAGGCTTGATTATTTTTATAATCAAGGAAAAAATGATTTTTTCGAA TCAAGAATTGCAAAATACAAATCAACTATATTTAGAACGAATATGCCACCGGGACCATTC ATCACTTCCAACCCGAAGGTAATTGTTTTGCTCGACGGCAAGAGTTTTCCGGTACTTTTC GATGCATCGAAAGTTGAAAAGAAGGATCTCTTCACCGGAACTTTCGTGCCGTCGACTGAA CTCACCGGTGGTTATCGTATTCTTTCGTATCTCGACCCATCTGAACCAAACCATGAAAAA TTGAAAAAGTTGATGTTCTTCCTTCTTTCTTCACGTCGTGATCATGTTATACCTGAGTTC CATGAAACTTATACAGAGCTTTTCGAAACCCTAGATAAGGAAATGGAGGAAAAAGGTACA GTTGGTTTTAACTCCGGCAGTGATCAAGCTGCGTTCAATTTCTTAGCTCGGTCGTTATTT GGAGTTAACCCAGTGGAAACTAAGCTCGGAACTGATGGTCCGGCATTGATCGGAAAATGG ATTTTGCTTCAGCTTCATCCTGTGATAACTCTCGGTCTTCCGAAGTTTCTAGACGACGTA CTCCTCCATACTTTCCGATTACCTCCGATTCTGGTGAAGAAAGATTATCAGAGACTTTAC GATTTCTTTTACACCAACTCCGCCAATTTGTTCATCGAAGCTGAAAAACTTGGCATTTCT AAAGATGAAGCTTGTCATAATCTTCTCTTCGCTACTTGCTTCAATTCCTTCGGTGGGATG AAGATTTTCTTCCCGAATATGCTGAAATCGATAGCGAAAGCAGGGGTGGAGATCCATACC CGTTTAGCAAACGAGATCCGATCGGAAGTAAAATCCGCCGGCGGGAAGATCACGATGTCG GCGATGGAGAAAATGCCGTTGATGAAATCAGTAGTATATGAAGCTTTACGAGTTGATCCT CCGGTAGCTTCACAATACGGAAGAGCCAAACAGGACCTTAAGATCGAATCACACGACGCC GTTTTCGAGGTGAAAAAGGGTGAAATCCTATTCGGGTACCAACCATTTGCAACGAAGGAT CCGAAAATTTTTGACCGGCCGGGAGAGTTCGTCGCCGATCGGTTCGTCGGAGAAGAAGGA GAAAAATTATTGAAACATGTATTATGGTCTAACGGACCGGAAACGGAAAGTCCTACAGTG GGGAATAAACAGTGCGCCGGAAAAGATTTCGTTGTGATGGTTTCGAGATTATTCGTAACG GAGTTTTTTCTCCGTTACGGTACACTCAACGTCGACGTTGGCACGTCGGCGTTAGGGTCT TCAATTACTATTACTTCTTTGAAAAAAGCTTAA

Peptide Sequence

PEP ID	Solyc11g069800.1.1
PEP Infomation	Allene oxide synthase (AHRD V3.3 *** Q8RW06_SOLTU)
Sequence	MALTLSFSLPLPSLHQKIPSKYSTFRPIIVSLSDKSTIEITQPIKLSTRTIPGDYGLPGI GPWKDRLDYFYNQGKNDFFESRIAKYKSTIFRTNMPPGPFITSNPKVIVLLDGKSFPVLF DASKVEKKDLFTGTFVPSTELTGGYRILSYLDPSEPNHEKLKKLMFFLLSSRRDHVIPEF HETYTELFETLDKEMEEKGTVGFNSGSDQAAFNFLARSLFGVNPVETKLGTDGPALIGKW ILLQLHPVITLGLPKFLDDVLLHTFRLPPILVKKDYQRLYDFFYTNSANLFIEAEKLGIS KDEACHNLLFATCFNSFGGMKIFFPNMLKSIAKAGVEIHTRLANEIRSEVKSAGGKITMS AMEKMPLMKSVVYEALRVDPPVASQYGRAKQDLKIESHDAVFEVKKGEILFGYQPFATKD PKIFDRPGEFVADRFVGEEGEKLLKHVLWSNGPETESPTVGNKQCAGKDFVVMVSRLFVT EFFLRYGTLNVDVGTSALGSSITITSLKKA*

Transcript Sequence

Transcript ID	Solyc11g069800.1.1
Transcript Infomation	Allene oxide synthase (AHRD V3.3 *** Q8RW06_SOLTU)
Sequence	ATGGCATTAACTTTATCTTTTTCTCTTCCTCTTCCTTCTCTTCACCAAAAAATTCCATCA AAATACTCTACATTTCGTCCTATTATTGTTTCTTTATCCGATAAATCAACAATCGAAATA ACCCAACCTATAAAATTATCTACCAGGACTATACCCGGCGACTATGGGTTGCCGGGTATT GGTCCATGGAAAGATAGGCTTGATTATTTTTATAATCAAGGAAAAAATGATTTTTTCGAA TCAAGAATTGCAAAATACAAATCAACTATATTTAGAACGAATATGCCACCGGGACCATTC ATCACTTCCAACCCGAAGGTAATTGTTTTGCTCGACGGCAAGAGTTTTCCGGTACTTTTC GATGCATCGAAAGTTGAAAAGAAGGATCTCTTCACCGGAACTTTCGTGCCGTCGACTGAA CTCACCGGTGGTTATCGTATTCTTTCGTATCTCGACCCATCTGAACCAAACCATGAAAAA TTGAAAAAGTTGATGTTCTTCCTTCTTTCTTCACGTCGTGATCATGTTATACCTGAGTTC CATGAAACTTATACAGAGCTTTTCGAAACCCTAGATAAGGAAATGGAGGAAAAAGGTACA GTTGGTTTTAACTCCGGCAGTGATCAAGCTGCGTTCAATTTCTTAGCTCGGTCGTTATTT GGAGTTAACCCAGTGGAAACTAAGCTCGGAACTGATGGTCCGGCATTGATCGGAAAATGG ATTTTGCTTCAGCTTCATCCTGTGATAACTCTCGGTCTTCCGAAGTTTCTAGACGACGTA CTCCTCCATACTTTCCGATTACCTCCGATTCTGGTGAAGAAAGATTATCAGAGACTTTAC GATTTCTTTTACACCAACTCCGCCAATTTGTTCATCGAAGCTGAAAAACTTGGCATTTCT AAAGATGAAGCTTGTCATAATCTTCTCTTCGCTACTTGCTTCAATTCCTTCGGTGGGATG AAGATTTTCTTCCCGAATATGCTGAAATCGATAGCGAAAGCAGGGGTGGAGATCCATACC CGTTTAGCAAACGAGATCCGATCGGAAGTAAAATCCGCCGGCGGGAAGATCACGATGTCG GCGATGGAGAAAATGCCGTTGATGAAATCAGTAGTATATGAAGCTTTACGAGTTGATCCT CCGGTAGCTTCACAATACGGAAGAGCCAAACAGGACCTTAAGATCGAATCACACGACGCC GTTTTCGAGGTGAAAAAGGGTGAAATCCTATTCGGGTACCAACCATTTGCAACGAAGGAT CCGAAAATTTTTGACCGGCCGGGAGAGTTCGTCGCCGATCGGTTCGTCGGAGAAGAAGGA GAAAAATTATTGAAACATGTATTATGGTCTAACGGACCGGAAACGGAAAGTCCTACAGTG GGGAATAAACAGTGCGCCGGAAAAGATTTCGTTGTGATGGTTTCGAGATTATTCGTAACG GAGTTTTTTCTCCGTTACGGTACACTCAACGTCGACGTTGGCACGTCGGCGTTAGGGTCT TCAATTACTATTACTTCTTTGAAAAAAGCTTAA