Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g069790.2.1
CDS Infomation

Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)
Sequence

ATGGCTTCTGCTAATGCTATTTCCACTGCTTCTATTATCCCTTCTCCTTCTAAACAGGGG
GGTTTGAAGAATAGGAAGGTCAGCCAATTGCAGGGACAGAGATTTGGCAACAAGGGTGCA
AAGAACCGATTTGTAGTCAAGGCCTGTGCTAAAGAAATTGCCTTTGACCAGAAATCTAGG
AGTGCCCTGCAGGCTGGAATCGACAAGCTTGCTGATGCTGTCGGCCTGACTCTTGGTCCA
AGGGGAAGGAATGTAGTGTTGGATGAATATGGCACCCCTAAGGTGGTTAACGATGGAGTT
ACAATTGCTCGTGCCATCGAGCTACCTGATGCTATGGAGAATGCTGGGGCTGCCCTTATC
AGGGAGGTTGCAAGCAAAACCAATGATTCAGCTGGTGATGGAACAACAACTGCATCTGTT
CTTGCTCGGGAAATCATTAAACTCGGTCTGTTGAGTGTTACATCTGGTGCAAATCCAGTG
TCTTTAAAGAGGGGCATTGACAAAACTGTACTGGGTTTGATTGAAGAGCTAGAAAAGAAG
GCTAGACCTGTTAAAGGCCGTGACGACATCAAAGCTATTGCTTCAATCTCTGCTGGAAAT
GATGAAAGCATCGGTACCATGATTGCGGATGCAATTGACAAAGTTGGTCCAGATGGTGTG
TTGTCCATTGAGTCATCCTCCTCCTTAGAGACAACTGTTCATGTTGAAGAAGGAATGGAG
ATCGATAGAGGATATATTTCCCCACAATTTGTCACCAACCCTGAGAAATTAATTTCTGAA
TTTGAGAATGCTAGAGTCTTGGTTACTGATCAGAAGATCTCAGCTATCAAGGACATTATC
CCTCTATTAGAAAAGACAACTCAATTACGTGCCCCTCTCCTCATTATTGCCGAGGATATC
ACCGGGGAAGCTCTGGCCACTCTTGTTGTGAACAAGTTGCGAGGTATACTGAATGTTGCT
GCCATCAAAGCTCCTGGATTTGGTGAAAGGAGAAAGGCTCTTCTGCAAGATATTGCCATT
GTGACAGGAGCTGAGTACCAGGCAACTGATTTGGGCCTGCTCGTTGAGAATACCCCAGTT
GAAGCACTTGGAATTGCCAGAAAGGTGACAATTACCAAGGACTCAACAACCATCATCGCT
GATGCAGCATCAAAGGACGAGATACAATCTAGGATTGCTCAGCTTAAAAAGGAACTGTCT
GAGACAGATTCAGTGTACGACTCCGAGAAACTTGCTGAGAGAATTGCCAAGCTTTCTGGG
GGTGTCGCCGTCATTAAGGTTGGAGCTGCAACAGAGGCCGAGCTTGAAGACCGCAAGCTT
CGTATTGAAGATGCAAAGAATGCAACTTTTGCTGCAATTGAAGAGGGAATAGTACCTGGT
GGTGGTGCTGCTTTTGTTCATTTATCAACTTATGTCCCTGCCATTAAGGAGAAGATTGAA
GATGCTGATGAAAGATTGGGCGCTGACATCATTCAAAAGGCATTGGTAGCCCCAGCATCT
TTGATAGCCCAAAATGCCGGAGTTGAAGGAGAAGTAGTCGTGGAGAAGGTGAAGGAAGCC
GAATGGGAGATGGGTTATAACGCGATGACAGACCAATACGAGAATCTCGTGGAAGCTGGA
GTCATCGATCCAGCCAAGGTGACAAGATGTGCCTTGCAGAATTCAGCATCAGTTTCAGGA
ATGGTGCTGACCACACAAGCCATAGTGGTCGAGAAGCCAAAGCCTAAGGTTGCTGCACCT
GCTGCTCCACAAGGACTTCAAGTGTGA

Peptide Sequence

PEP ID

Solyc11g069790.2.1
PEP Infomation

Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)
Sequence

MASANAISTASIIPSPSKQGGLKNRKVSQLQGQRFGNKGAKNRFVVKACAKEIAFDQKSR
SALQAGIDKLADAVGLTLGPRGRNVVLDEYGTPKVVNDGVTIARAIELPDAMENAGAALI
REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVLGLIEELEKK
ARPVKGRDDIKAIASISAGNDESIGTMIADAIDKVGPDGVLSIESSSSLETTVHVEEGME
IDRGYISPQFVTNPEKLISEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDI
TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEYQATDLGLLVENTPV
EALGIARKVTITKDSTTIIADAASKDEIQSRIAQLKKELSETDSVYDSEKLAERIAKLSG
GVAVIKVGAATEAELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKEKIE
DADERLGADIIQKALVAPASLIAQNAGVEGEVVVEKVKEAEWEMGYNAMTDQYENLVEAG
VIDPAKVTRCALQNSASVSGMVLTTQAIVVEKPKPKVAAPAAPQGLQV*

Transcript Sequence

Transcript ID

Solyc11g069790.2.1
Transcript Infomation

Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)
Sequence

AGTCTATCAATAATAATAATTCCAAAAAACAAAATGCAAAATATTAAGCCCTAGTCTCTC
TTTGTATACTTCACCAAACTTTGTCACTCTTTTCATTCCAAAACTCACCCAATCTCCTTA
TCCACTCACAATAACCCCTTTTCTTTCTTCTTCTCTGCAATGGCTTCTGCTAATGCTATT
TCCACTGCTTCTATTATCCCTTCTCCTTCTAAACAGGGGGGTTTGAAGAATAGGAAGGTC
AGCCAATTGCAGGGACAGAGATTTGGCAACAAGGGTGCAAAGAACCGATTTGTAGTCAAG
GCCTGTGCTAAAGAAATTGCCTTTGACCAGAAATCTAGGAGTGCCCTGCAGGCTGGAATC
GACAAGCTTGCTGATGCTGTCGGCCTGACTCTTGGTCCAAGGGGAAGGAATGTAGTGTTG
GATGAATATGGCACCCCTAAGGTGGTTAACGATGGAGTTACAATTGCTCGTGCCATCGAG
CTACCTGATGCTATGGAGAATGCTGGGGCTGCCCTTATCAGGGAGGTTGCAAGCAAAACC
AATGATTCAGCTGGTGATGGAACAACAACTGCATCTGTTCTTGCTCGGGAAATCATTAAA
CTCGGTCTGTTGAGTGTTACATCTGGTGCAAATCCAGTGTCTTTAAAGAGGGGCATTGAC
AAAACTGTACTGGGTTTGATTGAAGAGCTAGAAAAGAAGGCTAGACCTGTTAAAGGCCGT
GACGACATCAAAGCTATTGCTTCAATCTCTGCTGGAAATGATGAAAGCATCGGTACCATG
ATTGCGGATGCAATTGACAAAGTTGGTCCAGATGGTGTGTTGTCCATTGAGTCATCCTCC
TCCTTAGAGACAACTGTTCATGTTGAAGAAGGAATGGAGATCGATAGAGGATATATTTCC
CCACAATTTGTCACCAACCCTGAGAAATTAATTTCTGAATTTGAGAATGCTAGAGTCTTG
GTTACTGATCAGAAGATCTCAGCTATCAAGGACATTATCCCTCTATTAGAAAAGACAACT
CAATTACGTGCCCCTCTCCTCATTATTGCCGAGGATATCACCGGGGAAGCTCTGGCCACT
CTTGTTGTGAACAAGTTGCGAGGTATACTGAATGTTGCTGCCATCAAAGCTCCTGGATTT
GGTGAAAGGAGAAAGGCTCTTCTGCAAGATATTGCCATTGTGACAGGAGCTGAGTACCAG
GCAACTGATTTGGGCCTGCTCGTTGAGAATACCCCAGTTGAAGCACTTGGAATTGCCAGA
AAGGTGACAATTACCAAGGACTCAACAACCATCATCGCTGATGCAGCATCAAAGGACGAG
ATACAATCTAGGATTGCTCAGCTTAAAAAGGAACTGTCTGAGACAGATTCAGTGTACGAC
TCCGAGAAACTTGCTGAGAGAATTGCCAAGCTTTCTGGGGGTGTCGCCGTCATTAAGGTT
GGAGCTGCAACAGAGGCCGAGCTTGAAGACCGCAAGCTTCGTATTGAAGATGCAAAGAAT
GCAACTTTTGCTGCAATTGAAGAGGGAATAGTACCTGGTGGTGGTGCTGCTTTTGTTCAT
TTATCAACTTATGTCCCTGCCATTAAGGAGAAGATTGAAGATGCTGATGAAAGATTGGGC
GCTGACATCATTCAAAAGGCATTGGTAGCCCCAGCATCTTTGATAGCCCAAAATGCCGGA
GTTGAAGGAGAAGTAGTCGTGGAGAAGGTGAAGGAAGCCGAATGGGAGATGGGTTATAAC
GCGATGACAGACCAATACGAGAATCTCGTGGAAGCTGGAGTCATCGATCCAGCCAAGGTG
ACAAGATGTGCCTTGCAGAATTCAGCATCAGTTTCAGGAATGGTGCTGACCACACAAGCC
ATAGTGGTCGAGAAGCCAAAGCCTAAGGTTGCTGCACCTGCTGCTCCACAAGGACTTCAA
GTGTGATCGATATAACTATCTTTGCTAGGAAATTTTGTTGGTCTTGAGATGAACATCGAC
GTGGGGCTGGCTTGTTCGGGACAAGGTTAGCGTAGAACTACATGAGCGTATTGTTATTTT
TAGAGCCCTCACATTTAGAACTTGTATTGATTGAATAATATCGTCGCTTGTTCTGGTAAA
CATAAAGACGAATGTCTGTCCTATAGAACGGATAACAGTCTATTAGTTATTCATGTTCCT
TTACCTTTTCAGTTCTTGAGTAGTCTTTCCTCCATCTTTTGATCTTTAAACATTCTGCAT
TCTGGGGCTCTGGTGTTGTGTGCACTAATATCCATA