Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g069470.2.1
CDS Infomation

Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H962_ZINVI)
Sequence

ATGGCTATGGTGGCTCAACAGCATAGGGAGAGTAGTAGTGGTAGTATTACTAAACATCTT
GATAGTAGTGGAAAGTATGTTCGATATACGGCTGAGCAAGTTGAGGCTTTGGAGAGGGTT
TATGCAGAGTGTCCTAAGCCTAGCTCGTTGCGTCGACAGCAATTGATCCGTGAATGTCAT
ATTCTGTCGAATATCGAGCCTAAGCAGATCAAAGTTTGGTTTCAGAACAGAAGGTGTCGA
GAGAAGCAAAGGAAAGAGTCTTCTCGATTGCAGACTGTGAACAGAAAGTTGTCTGCGATG
AATAAACTGTTGATGGAGGAGAATGACCGCTTGCAGAAACAAGTCTCGCAGCTTGTATGT
GAAAATGGCTATATGCGGCAACAATTGCAAAGTGTATCGGCGGCCACTACTGATGTAAGT
TGTGAATCAGTGGTAACCACTCCTCAGCATTCCCTTAGAGATGCTAACAACCCTGCTGGA
CTACTACCAATTGCAGAAGAAACCTTGGCAGAGTTCCTTTCTAAGGCTACAGGAACTGCT
GTCGATTGGGTCCCGATGCCTGGGATGAAGCCTGGTCCGGATTCAGTTGGGATTTTTGCC
ATCTCACACAGTTGCAGTGGAGTGGCAGCCCGAGCATGTGGTCTTGTTAGTTTAGAGCCA
ACAAAGATTGCTGATATCCTCAAAGATCGACCTTCTTGGTTCCGCGACTGCCGGAATGTT
GAAGTTATCACAATGTTTCCTGCTGGAAATGGTGGTACAGTTGAGCTTTTGTATACCCAG
ATATATGCTCCCACAACTCTGGCTCCCGCGCGTGATTTTTGGACGCTGAGATACACAACA
ACCCTAGACAATGGTAGTCTCGTGGTTTGTGAAAGATCCCTATCTGGTAATGGGCCTGGC
CCAAATCCTACTGCTGCTTCCCAGTTTGTAAGAGCTCAAATGCTTCCATCTGGATATCTG
ATCCGACCGTGTGATGGTGGAGGATCAATCATACATATTGTTGATCACCTGAATCTTGAG
GCATGGAGTGCCCCTGAGATTTTGCGTCCACTCTATGAATCGTCGAAAGTTGTGGCACAG
AAAATGACTATTGCAGTGAGTTCAACCCTTCGTTATCATTTAATACGGCATATAGATTTA
TATGTTTGTCAGGCACTGCGATATGCAAGGCAACTAGCTCAAGAGACTAGCGGCGAGGTA
GTATATGGTCTAGGAAGGCAACCTGCTGTTCTTCGAACATTTAGCCAGAGATTATGCAGA
GGGTTCAATGATGCCATCAATGGATTCGGTGACGATGGCTGGTCAATGTTAAGTTCAGAT
GGTGCTGAAGATGTCATAGTTGCTGTCAATTCAAGGAAGAACCTCGCAACCACCTCCATT
CCTCTTTCCCCGCTTGGTGGCGTCCTTTGTGCCAAAGCATCAATGCTACTCCAGAATGTC
CCCCCTGCCGTACTGGTTCGGTTTCTGAGGGAGCACCGTTCAGAGTGGGCAGACTTTAAT
GTTGATGCTTTTGTAGCTTCTGCATTGAAGTCTTGTCCGTATACATATCCTGGGATGAGG
CCTACCAGATTTACCGGTAGCCAGATAATAATGCCACTTGGCCACACAATTGAGCATGAA
GAAATGCTTGAAGTTATTAGACTTGAAGGGCACTCTATTGGACAGGAAGATGCTTTTATG
CCAAGAGATATTCACCTTTTACAGATGTGTAGTGGCACTGATGAGAATGCAGTTGGAGCC
TGTTCTGAACTAGTTTTTGCCCCTATTGATGAGATGTTTCCAGATGATGCACCTTTGCTT
CCCTCCGGATTTCGCATTATTCCTCTCGAATCAAAATCAGGTGATGCCCAGGATACGTTG
AACGCACATAGAACATTAGATCTAGCATCAAGTCTTGAAGTGGGCCCAGCAACAAACTCG
ACTACTGGAGATGCAGCTTCTTGTTACAGTGCACGATCTGTACTGACAATCGCTTTCCAA
TTTCCATTTGAGGACAATCTTCAGGACAATGTGGCTACCATGGCCCGACAGTATGTTCGC
AGTGTGGTTTCGTCTGTCCAACGAGTTGCCATGGCAATATCTCCTACGGGAATGAATCCT
ACACTGGGGGCCAAGCTTTCTCCAGGCTCACCAGAAGCTGTAACATTGTCGCATTGGATC
TGCCAGAGCTATAGTTATCACATGGGAACAGAGTTACTTCGAGCTGATTCTAGTGGCGAT
GAATCAGTACTAAAGAATCTCTGGCAACACCAGGATGCAATTTTGTGCTGCTCATTGAAG
TCGCTGCCAGTTTTCATTTTTGCTAATAAGGCCGGACTCGACATGCTGGAGACAACATTA
GTTGCATTACAGGACATTTCTCTAGATAAGATATTTGATGAATCCGGAAGGAAAGTGTTG
CTCTCAGAATTTGCCAAGATTATGGAACAGGGTTTCGCGTGTTTGCCTGGTGGTATCTGC
ATGTCAACAATGGGACGACATATTTCATATGAACAAGCTATCGCGTGGAAAGTGTTTGCG
TCGTCTGAAGAAAATGCTGTCCACTGTTTGGCCTTTTCGTTTATCAACTGGTCATTCGTG
TAA

Peptide Sequence

PEP ID

Solyc11g069470.2.1
PEP Infomation

Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H962_ZINVI)
Sequence

MAMVAQQHRESSSGSITKHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECH
ILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVC
ENGYMRQQLQSVSAATTDVSCESVVTTPQHSLRDANNPAGLLPIAEETLAEFLSKATGTA
VDWVPMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPTKIADILKDRPSWFRDCRNV
EVITMFPAGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGNGPG
PNPTAASQFVRAQMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSAPEILRPLYESSKVVAQ
KMTIAVSSTLRYHLIRHIDLYVCQALRYARQLAQETSGEVVYGLGRQPAVLRTFSQRLCR
GFNDAINGFGDDGWSMLSSDGAEDVIVAVNSRKNLATTSIPLSPLGGVLCAKASMLLQNV
PPAVLVRFLREHRSEWADFNVDAFVASALKSCPYTYPGMRPTRFTGSQIIMPLGHTIEHE
EMLEVIRLEGHSIGQEDAFMPRDIHLLQMCSGTDENAVGACSELVFAPIDEMFPDDAPLL
PSGFRIIPLESKSGDAQDTLNAHRTLDLASSLEVGPATNSTTGDAASCYSARSVLTIAFQ
FPFEDNLQDNVATMARQYVRSVVSSVQRVAMAISPTGMNPTLGAKLSPGSPEAVTLSHWI
CQSYSYHMGTELLRADSSGDESVLKNLWQHQDAILCCSLKSLPVFIFANKAGLDMLETTL
VALQDISLDKIFDESGRKVLLSEFAKIMEQGFACLPGGICMSTMGRHISYEQAIAWKVFA
SSEENAVHCLAFSFINWSFV*

Transcript Sequence

Transcript ID

Solyc11g069470.2.1
Transcript Infomation

Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H962_ZINVI)
Sequence

CTCTCTCTCTCTCCATTTTCTTTCTTTTTCCTCAACCACCACTCTCCATTTTTCATCATC
TTACACAAAACCACCAATACTCTCTCTCTAAAAACAATAAAAATTCAATCTTTTTTGTTG
TTCTTGAAAAAAACCATGTCTTTTACAGTTTGTTTCAGTTTCAGATCTTAAGGGGTTGTT
TCTACTAATGTTTTGAACCTTTTTTCTTCTTCTGGGGTTGAATAAAAAACAGAAGGGAAA
ATCAAGAATCAGAGCTTTTTTTTTTTATTTTTTTTGAATTCTGTTTGTTAAGGGGGTGGT
GGTTCTTGTTTTTCTGTATAGGGTAAAGGGTGTTTGTTTGTATGATTTGTTTTTTTGTCT
ACTTTAAGAGAATCCATCCATCTCTTTTTCAGTGATATTTGGGAAAAAGAACTCCATTTT
TGGCTTGTAATCCGAAAATTCAGGTTGGGTATCAAACGTGTCATTTATTCCAGCTCAGAA
TCTTGAAATTCATGAAAAAAAGTTAAAGTTTTTTTTTTTTTTTGCTTAAGATTCCAAAAA
TTTGAGAGTTTTGAAGCAAAAATCAAAGGGCTATTGGTAGAAAGTTAAAAGTTCTTTTTA
ATGATGATGGAGTTTGGAGGTTTGTGTGAATGGAAATGGTGTAGTAAAGTATCAAACACG
AGTAATTTACAGCTGAAGTGATTTTTTTTTTTGATTTTGTTGTCCTTTTCTGCCATATCT
TTCGTTGAGCAGTTTTGGCTGTACCTTAATTTGTAAGTTTAGCGTGAAGTGTATGTTTGA
GCCTTGTGTAGAAACCAAAAGGGGGAGAACCTAGGAATCTTCTAGTTCAATCAAGATCGT
CCATTTCATCTTGTCTGAGATCCCTAGAAAAAAAAAGAACAAAAGAAAAAGATAAAGCCT
TTGTTTCAGAGAATCTTAGTTCTCTGTATAGATATATATACATATATATGTAAAGCTGCT
AAGGAAGTAGTTTCAGGGAATATATCTACTTGGGGGTGTTTTGAAAATCTTGATTTTTTT
TTCTGGGGTTTGGATTTGAGGGAAAATGGCTATGGTGGCTCAACAGCATAGGGAGAGTAG
TAGTGGTAGTATTACTAAACATCTTGATAGTAGTGGAAAGTATGTTCGATATACGGCTGA
GCAAGTTGAGGCTTTGGAGAGGGTTTATGCAGAGTGTCCTAAGCCTAGCTCGTTGCGTCG
ACAGCAATTGATCCGTGAATGTCATATTCTGTCGAATATCGAGCCTAAGCAGATCAAAGT
TTGGTTTCAGAACAGAAGGTGTCGAGAGAAGCAAAGGAAAGAGTCTTCTCGATTGCAGAC
TGTGAACAGAAAGTTGTCTGCGATGAATAAACTGTTGATGGAGGAGAATGACCGCTTGCA
GAAACAAGTCTCGCAGCTTGTATGTGAAAATGGCTATATGCGGCAACAATTGCAAAGTGT
ATCGGCGGCCACTACTGATGTAAGTTGTGAATCAGTGGTAACCACTCCTCAGCATTCCCT
TAGAGATGCTAACAACCCTGCTGGACTACTACCAATTGCAGAAGAAACCTTGGCAGAGTT
CCTTTCTAAGGCTACAGGAACTGCTGTCGATTGGGTCCCGATGCCTGGGATGAAGCCTGG
TCCGGATTCAGTTGGGATTTTTGCCATCTCACACAGTTGCAGTGGAGTGGCAGCCCGAGC
ATGTGGTCTTGTTAGTTTAGAGCCAACAAAGATTGCTGATATCCTCAAAGATCGACCTTC
TTGGTTCCGCGACTGCCGGAATGTTGAAGTTATCACAATGTTTCCTGCTGGAAATGGTGG
TACAGTTGAGCTTTTGTATACCCAGATATATGCTCCCACAACTCTGGCTCCCGCGCGTGA
TTTTTGGACGCTGAGATACACAACAACCCTAGACAATGGTAGTCTCGTGGTTTGTGAAAG
ATCCCTATCTGGTAATGGGCCTGGCCCAAATCCTACTGCTGCTTCCCAGTTTGTAAGAGC
TCAAATGCTTCCATCTGGATATCTGATCCGACCGTGTGATGGTGGAGGATCAATCATACA
TATTGTTGATCACCTGAATCTTGAGGCATGGAGTGCCCCTGAGATTTTGCGTCCACTCTA
TGAATCGTCGAAAGTTGTGGCACAGAAAATGACTATTGCAGTGAGTTCAACCCTTCGTTA
TCATTTAATACGGCATATAGATTTATATGTTTGTCAGGCACTGCGATATGCAAGGCAACT
AGCTCAAGAGACTAGCGGCGAGGTAGTATATGGTCTAGGAAGGCAACCTGCTGTTCTTCG
AACATTTAGCCAGAGATTATGCAGAGGGTTCAATGATGCCATCAATGGATTCGGTGACGA
TGGCTGGTCAATGTTAAGTTCAGATGGTGCTGAAGATGTCATAGTTGCTGTCAATTCAAG
GAAGAACCTCGCAACCACCTCCATTCCTCTTTCCCCGCTTGGTGGCGTCCTTTGTGCCAA
AGCATCAATGCTACTCCAGAATGTCCCCCCTGCCGTACTGGTTCGGTTTCTGAGGGAGCA
CCGTTCAGAGTGGGCAGACTTTAATGTTGATGCTTTTGTAGCTTCTGCATTGAAGTCTTG
TCCGTATACATATCCTGGGATGAGGCCTACCAGATTTACCGGTAGCCAGATAATAATGCC
ACTTGGCCACACAATTGAGCATGAAGAAATGCTTGAAGTTATTAGACTTGAAGGGCACTC
TATTGGACAGGAAGATGCTTTTATGCCAAGAGATATTCACCTTTTACAGATGTGTAGTGG
CACTGATGAGAATGCAGTTGGAGCCTGTTCTGAACTAGTTTTTGCCCCTATTGATGAGAT
GTTTCCAGATGATGCACCTTTGCTTCCCTCCGGATTTCGCATTATTCCTCTCGAATCAAA
ATCAGGTGATGCCCAGGATACGTTGAACGCACATAGAACATTAGATCTAGCATCAAGTCT
TGAAGTGGGCCCAGCAACAAACTCGACTACTGGAGATGCAGCTTCTTGTTACAGTGCACG
ATCTGTACTGACAATCGCTTTCCAATTTCCATTTGAGGACAATCTTCAGGACAATGTGGC
TACCATGGCCCGACAGTATGTTCGCAGTGTGGTTTCGTCTGTCCAACGAGTTGCCATGGC
AATATCTCCTACGGGAATGAATCCTACACTGGGGGCCAAGCTTTCTCCAGGCTCACCAGA
AGCTGTAACATTGTCGCATTGGATCTGCCAGAGCTATAGTTATCACATGGGAACAGAGTT
ACTTCGAGCTGATTCTAGTGGCGATGAATCAGTACTAAAGAATCTCTGGCAACACCAGGA
TGCAATTTTGTGCTGCTCATTGAAGTCGCTGCCAGTTTTCATTTTTGCTAATAAGGCCGG
ACTCGACATGCTGGAGACAACATTAGTTGCATTACAGGACATTTCTCTAGATAAGATATT
TGATGAATCCGGAAGGAAAGTGTTGCTCTCAGAATTTGCCAAGATTATGGAACAGGGTTT
CGCGTGTTTGCCTGGTGGTATCTGCATGTCAACAATGGGACGACATATTTCATATGAACA
AGCTATCGCGTGGAAAGTGTTTGCGTCGTCTGAAGAAAATGCTGTCCACTGTTTGGCCTT
TTCGTTTATCAACTGGTCATTCGTGTAATGCTATCATATTTTTTTTTTCTTTTTCGACCT
TTCTCACAGAATACTGATAGCCAGGAACACAGTTGAATGAGGGGACAAACGAAATTTTTT
GTAACATGTAAAATTCCCAGTTTCTTCTGCATTAATTTAATTAGACTGGAAGGTGTATTT
CATTTCTTGATTTCTTGATACTCTTGTGTAAATCTTTTTAGTGCAGTTTTGTTTTTGTTT
TTTTTCGAGTGAAATTGCTTGTTTCTGAA