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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g069460.2.1
CDS Infomation

Double-stranded RNA binding protein, putative (AHRD V3.3 *** B9SVC8_RICCO)
Sequence

ATGTACAAGAATCAGTTGCAGGAGTTAGCACAGAGGAGCTGTTTCAATTTGCCCTCTTAT
GTATGTATAAGAGAAGGTCCTGATCACGCGCCGCGGTTCAAGGCCGTCGTTAACTTTAAC
GGCGAGAATTTTGAGAGCCCTCATTACTGCTCAACACTCCGGCAAGCTGAACACGCCGCC
GCTGTAGTTGCACTTAACGCTTTATCGAACCGTGGTCCTTCTCATTCTCTAGCTGCGCGT
ATACTTGATGAAACAGGCGTCTATAAAAATCTGTTGCAAGAGATAGCGCAAAGAGTTGGA
GCTCCTTTGCCTCAGTACACAACATATCGGTCAGGACTTGGCCACCAACCCGTGTTTACA
GGGACTGTAGAATTGGCTGGAATCACGTTTACTGGTGAACCTGCCAAGAACAAAAAGCAA
GCTGAGAAGAATTCTGCCCTGGCAGCTTGGTCATCGTTGAAACAATTGGCGCAGCAAGAT
GCAAGTTTATCATCTGAACTGGAGAACAATGATGAGCAGGAACAGATCAGAATAGCAAGA
GCCTTACTGAATTACCGTTTGAAGGAACAGTTAGAAATGGCCAAATCTGGCAAGGTGCAA
ATACCATTCCAGAAGAAGTTCCCAATTCCATCTCCTCGACCATCAAGTCCACAGCGTCCT
GCAGTCACGTCATCCAAAATCCTCCCCTTAATCTGCCCTAAAACAGTTAATCGTTACAGA
TCGTCCTCTGCGACAATAAATGACAGCCATTCCTCGTTATCACAGCCGCTGCCACAATCA
CAAGCTTCATCATCAGAAGGCCGCACTGTTTCCACCCGTATATCTCATGCTCCAGGGGCA
GCTCCACCATATATGCCAGTTAGACAATATAATAGGACACCTTACCATGGTATTGCTCCG
CCTGTTACAATTAGAACAGCAGTGCCAGTTTTCTCTGCACCACCTCGTCCACAACCAACC
GGATGCCCAACTCAAATGATGCAGGCCCGTTCAGTTCGAGTTGCACCACCTGTCTGTATT
AGGCAGGCTATCCCGGTATATGCTACTCCACCAGCCAAAAAGGAAACTGTGGCACATGCT
ACTACTACAGCAAGTAGGCCATCATCTCAGCCTGAGGAAGCTATGGCACGAGCTACAATT
GCTCCAAGCAGGCCCTTAGCTCAGCCCAAGGAAACTGGGACCAATGCTGGCACCGAGGTT
GATGAATCAACGGCAATGAAGTGCTTGGAGGAGCTCAGTTTATGA

Peptide Sequence

PEP ID

Solyc11g069460.2.1
PEP Infomation

Double-stranded RNA binding protein, putative (AHRD V3.3 *** B9SVC8_RICCO)
Sequence

MYKNQLQELAQRSCFNLPSYVCIREGPDHAPRFKAVVNFNGENFESPHYCSTLRQAEHAA
AVVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHQPVFT
GTVELAGITFTGEPAKNKKQAEKNSALAAWSSLKQLAQQDASLSSELENNDEQEQIRIAR
ALLNYRLKEQLEMAKSGKVQIPFQKKFPIPSPRPSSPQRPAVTSSKILPLICPKTVNRYR
SSSATINDSHSSLSQPLPQSQASSSEGRTVSTRISHAPGAAPPYMPVRQYNRTPYHGIAP
PVTIRTAVPVFSAPPRPQPTGCPTQMMQARSVRVAPPVCIRQAIPVYATPPAKKETVAHA
TTTASRPSSQPEEAMARATIAPSRPLAQPKETGTNAGTEVDESTAMKCLEELSL*

Transcript Sequence

Transcript ID

Solyc11g069460.2.1
Transcript Infomation

Double-stranded RNA binding protein, putative (AHRD V3.3 *** B9SVC8_RICCO)
Sequence

GCCATGTTTGTTAATCTCACACATCTTCATCAAAAACCCATCTGAAAACCCCCAAAAAAT
CCGACCCGTTTTACCCATTTTCAGCCATGTTTAGCTATCTAATACTCTATCAAAAACCCA
TCTGAAAACCAGAAATTGTTCAGACCCATTTGCCCATTTCATAGATAAACCCGACCCATT
TGCCCATTTCTGTATTTTAGGGATAGAGATGTACAAGAATCAGTTGCAGGAGTTAGCACA
GAGGAGCTGTTTCAATTTGCCCTCTTATGTATGTATAAGAGAAGGTCCTGATCACGCGCC
GCGGTTCAAGGCCGTCGTTAACTTTAACGGCGAGAATTTTGAGAGCCCTCATTACTGCTC
AACACTCCGGCAAGCTGAACACGCCGCCGCTGTAGTTGCACTTAACGCTTTATCGAACCG
TGGTCCTTCTCATTCTCTAGCTGCGCGTATACTTGATGAAACAGGCGTCTATAAAAATCT
GTTGCAAGAGATAGCGCAAAGAGTTGGAGCTCCTTTGCCTCAGTACACAACATATCGGTC
AGGACTTGGCCACCAACCCGTGTTTACAGGGACTGTAGAATTGGCTGGAATCACGTTTAC
TGGTGAACCTGCCAAGAACAAAAAGCAAGCTGAGAAGAATTCTGCCCTGGCAGCTTGGTC
ATCGTTGAAACAATTGGCGCAGCAAGATGCAAGTTTATCATCTGAACTGGAGAACAATGA
TGAGCAGGAACAGATCAGAATAGCAAGAGCCTTACTGAATTACCGTTTGAAGGAACAGTT
AGAAATGGCCAAATCTGGCAAGGTGCAAATACCATTCCAGAAGAAGTTCCCAATTCCATC
TCCTCGACCATCAAGTCCACAGCGTCCTGCAGTCACGTCATCCAAAATCCTCCCCTTAAT
CTGCCCTAAAACAGTTAATCGTTACAGATCGTCCTCTGCGACAATAAATGACAGCCATTC
CTCGTTATCACAGCCGCTGCCACAATCACAAGCTTCATCATCAGAAGGCCGCACTGTTTC
CACCCGTATATCTCATGCTCCAGGGGCAGCTCCACCATATATGCCAGTTAGACAATATAA
TAGGACACCTTACCATGGTATTGCTCCGCCTGTTACAATTAGAACAGCAGTGCCAGTTTT
CTCTGCACCACCTCGTCCACAACCAACCGGATGCCCAACTCAAATGATGCAGGCCCGTTC
AGTTCGAGTTGCACCACCTGTCTGTATTAGGCAGGCTATCCCGGTATATGCTACTCCACC
AGCCAAAAAGGAAACTGTGGCACATGCTACTACTACAGCAAGTAGGCCATCATCTCAGCC
TGAGGAAGCTATGGCACGAGCTACAATTGCTCCAAGCAGGCCCTTAGCTCAGCCCAAGGA
AACTGGGACCAATGCTGGCACCGAGGTTGATGAATCAACGGCAATGAAGTGCTTGGAGGA
GCTCAGTTTATGACAATGGCTTGGTCCTTTGAATCTACCAATACCTATGTCAAACATTTT
TGTTGTCTTCTTTTAGTACTTGGTGCTTGAACAAACAAGGAGAATGAAATGCTTGGGAAG
TTCAGAGAATGATAGTGACTTTGGACATAGTTAAGCTATTAATATCTATGTTAACATTTC
TGTATCTATTAGTATAATTTTCATATTTCAATGTT