Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g069270.2.1
CDS Infomation

Beta-galactosidase (AHRD V3.3 *** E3UVW7_SOLLC)
Sequence

ATGGAAAGAAGAAGTGGGTATTGTTTATCAGTTATAATGTTAGTGTTTGGAGTGGTTTTC
TTGCATTGTTTGGTGATGACGTCATTTGCCGCTAATGTGACGTATGATCACCGGGCATTG
GTTGTTGACGGAAGGAGAAGAGTTTTGATCTCCGGTTCAATACATTATCCTCGGAGTACT
CCTGATATGTGGCCAGACCTTATACAGAAATCAAAAGATGGAGGATTGGATGTTATAGAG
ACTTATGTTTTCTGGAACCTTCATGAACCTGTTCGAAATCAGTATGATTTTGAAGGAAGG
AAAGATTTGATTAATTTTGTGAAGTTGGTGGAGAAAGCTGGCTTATTTGTTCATATAAGG
ATTGGGCCTTATGTTTGTGCAGAATGGAACTATGGTGGGTTTCCTCTTTGGTTGCATTTC
ATTCCTGGAATTGAATTTCGAACCGACAATGAACCGTTCAAGGCAGAAATGAAGCGATTC
ACAGCTAAAATTGTTGACATGATCAAGCAAGAAAATCTATATGCATCCCAGGGTGGGCCG
GTTATCTTGTCTCAGATAGAAAATGAGTATGGCAATGGTGATATTGAGTCTCGTTATGGT
CCTCGTGCCAAACCTTACGTGAACTGGGCAGCATCAATGGCTACGTCTTTAAATACGGGA
GTGCCATGGGTTATGTGTCAGCAACCAGATGCCCCTCCTTCCGTTATTAACACTTGCAAT
GGATTTTATTGTGACCAATTCAAGCAAAATTCCGATAAAACACCCAAGATGTGGACTGAG
AATTGGACCGGATGGTTTCTGTCGTTTGGTGGTCCTGTCCCTTACAGACCAGTGGAAGAC
ATCGCTTTCGCTGTGGCTCGATTTTTCCAGCGAGGCGGAACTTTCCAGAACTATTACATG
TACCACGGGGGAACTAACTTTGGGAGAACCAGTGGTGGACCGTTTATTGCAACTAGCTAT
GACTATGATGCTCCTTTAGATGAGTACGGGCTTATAAATCAACCAAAATGGGGTCACTTG
AAAGATCTCCATAAAGCCATAAAGCTTTGTGAGGCTGCAATGGTGGCAACAGAACCAAAC
ATCACTTCTCTGGGCTCTAATATAGAGGTCAGTGTTTATAAAACTGATTCACAGTGTGCT
GCATTTCTCGCCAATACTGCTACGCAATCTGATGCGGCTGTGAGCTTCAATGGAAACTCA
TATCATTTACCTCCATGGTCCGTCAGCATTTTACCTGACTGCAAGAATGTTGCTTTTAGT
ACTGCAAAGATTAATTCTGCATCAACCATCTCAACATTTGTTACTCGGTCTTCGGAAGCT
GATGCATCTGGTGGATCCCTATCAGGTTGGACTTCGGTGAATGAGCCTGTAGGCATCTCA
AATGAAAATGCATTCACGAGAATGGGGTTGTTGGAACAGATAAATACTACAGCTGATAAA
AGCGATTATCTCTGGTACTCCCTGAGTGTCAATATAAAAAATGATGAGCCTTTCCTTCAA
GATGGATCTGCAACGGTACTTCATGTGAAAACACTTGGCCATGTTCTTCATGCTTATATT
AATGGAAAGCTATCAGGAAGTGGAAAAGGCAACAGTAGACATTCTAACTTTACAATTGAA
GTTCCAGTCACACTTGTGCCTGGAGAAAACAAAATTGACCTGTTGAGTGCGACTGTGGGA
CTTCAGAACTATGGAGCATTCTTTGATCTCAAGGGAGCAGGGATTACGGGTCCAGTGCAA
TTGAAAGGTTTCAAAAATGGCTCTACTACTGATCTTTCATCAAAGCAGTGGACATATCAG
GTTGGATTGAAAGGAGAAGATTTGGGCTTATCTAATGGAGGTTCTACACTTTGGAAGTCA
CAAACTGCATTGCCTACAAACCAACCATTAATATGGTATAAGGCAAGTTTTGATGCTCCT
GCTGGTGATACCCCTCTTTCGATGGATTTTACTGGAATGGGGAAGGGTGAGGCATGGGTG
AATGGGCAAAGCATCGGTCGATTTTGGCCTGCCTATATTGCACCGAATGACGGTTGTACT
GACCCCTGCAATTATAGAGGAGGATACAATGCTGAAAAATGTCTCAAAAATTGTGGAAAA
CCATCCCAGCTGCTATACCACGTTCCTCGTTCATGGCTGAAATCCAGTGGAAATGTCTTG
GTGTTGTTTGAGGAAATGGGCGGGGATCCTACGAAGCTGTCTTTTGCAACAAGAGAGATA
CAAAGTGTATGCTCAAGAATATCTGATGCTCATCCACTTCCTATTGATATGTGGGCTTCG
GAAGACGATGCACGAAAAAAGTCAGGGCCAACTCTATCTCTTGAGTGCCCTCATCCTAAT
CAAGTCATCTCATCAATCAAATTTGCAAGCTTTGGCACTCCTCAAGGAACATGCGGGAGC
TTTATCCATGGTCGATGCAGTAGCAGCAATGCTCTTTCAATTGTAAAGAAGGCTTGCATT
GGATCAAAAAGCTGTAGTCTTGGAGTTTCAATAAATGCATTTGGTGATCCATGTAAAGGA
GTCGCAAAAAGTTTAGCTGTAGAAGCTTCTTGTACATGA

Peptide Sequence

PEP ID

Solyc11g069270.2.1
PEP Infomation

Beta-galactosidase (AHRD V3.3 *** E3UVW7_SOLLC)
Sequence

MERRSGYCLSVIMLVFGVVFLHCLVMTSFAANVTYDHRALVVDGRRRVLISGSIHYPRST
PDMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYDFEGRKDLINFVKLVEKAGLFVHIR
IGPYVCAEWNYGGFPLWLHFIPGIEFRTDNEPFKAEMKRFTAKIVDMIKQENLYASQGGP
VILSQIENEYGNGDIESRYGPRAKPYVNWAASMATSLNTGVPWVMCQQPDAPPSVINTCN
GFYCDQFKQNSDKTPKMWTENWTGWFLSFGGPVPYRPVEDIAFAVARFFQRGGTFQNYYM
YHGGTNFGRTSGGPFIATSYDYDAPLDEYGLINQPKWGHLKDLHKAIKLCEAAMVATEPN
ITSLGSNIEVSVYKTDSQCAAFLANTATQSDAAVSFNGNSYHLPPWSVSILPDCKNVAFS
TAKINSASTISTFVTRSSEADASGGSLSGWTSVNEPVGISNENAFTRMGLLEQINTTADK
SDYLWYSLSVNIKNDEPFLQDGSATVLHVKTLGHVLHAYINGKLSGSGKGNSRHSNFTIE
VPVTLVPGENKIDLLSATVGLQNYGAFFDLKGAGITGPVQLKGFKNGSTTDLSSKQWTYQ
VGLKGEDLGLSNGGSTLWKSQTALPTNQPLIWYKASFDAPAGDTPLSMDFTGMGKGEAWV
NGQSIGRFWPAYIAPNDGCTDPCNYRGGYNAEKCLKNCGKPSQLLYHVPRSWLKSSGNVL
VLFEEMGGDPTKLSFATREIQSVCSRISDAHPLPIDMWASEDDARKKSGPTLSLECPHPN
QVISSIKFASFGTPQGTCGSFIHGRCSSSNALSIVKKACIGSKSCSLGVSINAFGDPCKG
VAKSLAVEASCT*

Transcript Sequence

Transcript ID

Solyc11g069270.2.1
Transcript Infomation

Beta-galactosidase (AHRD V3.3 *** E3UVW7_SOLLC)
Sequence

AACAGTAAAAACAAAAAGAATCCTTTTCCAATTCAAAATAATGACTTAAACCTCTTTCTT
GATTATCATATTGAAACGCGATTAAATTTAAAATTTCTTTTATCAAAAAAAATAAATTTC
AAGTTATTTCACCACAATTCATATATCCGACAAATAATTTCATAAATTTTCGATGTGTCA
GCAGAATCAGAGTTGATCGGAAAATTGAAGATTTTTGGCCGGAAAATGGAAAGAAGAAGT
GGGTATTGTTTATCAGTTATAATGTTAGTGTTTGGAGTGGTTTTCTTGCATTGTTTGGTG
ATGACGTCATTTGCCGCTAATGTGACGTATGATCACCGGGCATTGGTTGTTGACGGAAGG
AGAAGAGTTTTGATCTCCGGTTCAATACATTATCCTCGGAGTACTCCTGATATGTGGCCA
GACCTTATACAGAAATCAAAAGATGGAGGATTGGATGTTATAGAGACTTATGTTTTCTGG
AACCTTCATGAACCTGTTCGAAATCAGTATGATTTTGAAGGAAGGAAAGATTTGATTAAT
TTTGTGAAGTTGGTGGAGAAAGCTGGCTTATTTGTTCATATAAGGATTGGGCCTTATGTT
TGTGCAGAATGGAACTATGGTGGGTTTCCTCTTTGGTTGCATTTCATTCCTGGAATTGAA
TTTCGAACCGACAATGAACCGTTCAAGGCAGAAATGAAGCGATTCACAGCTAAAATTGTT
GACATGATCAAGCAAGAAAATCTATATGCATCCCAGGGTGGGCCGGTTATCTTGTCTCAG
ATAGAAAATGAGTATGGCAATGGTGATATTGAGTCTCGTTATGGTCCTCGTGCCAAACCT
TACGTGAACTGGGCAGCATCAATGGCTACGTCTTTAAATACGGGAGTGCCATGGGTTATG
TGTCAGCAACCAGATGCCCCTCCTTCCGTTATTAACACTTGCAATGGATTTTATTGTGAC
CAATTCAAGCAAAATTCCGATAAAACACCCAAGATGTGGACTGAGAATTGGACCGGATGG
TTTCTGTCGTTTGGTGGTCCTGTCCCTTACAGACCAGTGGAAGACATCGCTTTCGCTGTG
GCTCGATTTTTCCAGCGAGGCGGAACTTTCCAGAACTATTACATGTACCACGGGGGAACT
AACTTTGGGAGAACCAGTGGTGGACCGTTTATTGCAACTAGCTATGACTATGATGCTCCT
TTAGATGAGTACGGGCTTATAAATCAACCAAAATGGGGTCACTTGAAAGATCTCCATAAA
GCCATAAAGCTTTGTGAGGCTGCAATGGTGGCAACAGAACCAAACATCACTTCTCTGGGC
TCTAATATAGAGGTCAGTGTTTATAAAACTGATTCACAGTGTGCTGCATTTCTCGCCAAT
ACTGCTACGCAATCTGATGCGGCTGTGAGCTTCAATGGAAACTCATATCATTTACCTCCA
TGGTCCGTCAGCATTTTACCTGACTGCAAGAATGTTGCTTTTAGTACTGCAAAGATTAAT
TCTGCATCAACCATCTCAACATTTGTTACTCGGTCTTCGGAAGCTGATGCATCTGGTGGA
TCCCTATCAGGTTGGACTTCGGTGAATGAGCCTGTAGGCATCTCAAATGAAAATGCATTC
ACGAGAATGGGGTTGTTGGAACAGATAAATACTACAGCTGATAAAAGCGATTATCTCTGG
TACTCCCTGAGTGTCAATATAAAAAATGATGAGCCTTTCCTTCAAGATGGATCTGCAACG
GTACTTCATGTGAAAACACTTGGCCATGTTCTTCATGCTTATATTAATGGAAAGCTATCA
GGAAGTGGAAAAGGCAACAGTAGACATTCTAACTTTACAATTGAAGTTCCAGTCACACTT
GTGCCTGGAGAAAACAAAATTGACCTGTTGAGTGCGACTGTGGGACTTCAGAACTATGGA
GCATTCTTTGATCTCAAGGGAGCAGGGATTACGGGTCCAGTGCAATTGAAAGGTTTCAAA
AATGGCTCTACTACTGATCTTTCATCAAAGCAGTGGACATATCAGGTTGGATTGAAAGGA
GAAGATTTGGGCTTATCTAATGGAGGTTCTACACTTTGGAAGTCACAAACTGCATTGCCT
ACAAACCAACCATTAATATGGTATAAGGCAAGTTTTGATGCTCCTGCTGGTGATACCCCT
CTTTCGATGGATTTTACTGGAATGGGGAAGGGTGAGGCATGGGTGAATGGGCAAAGCATC
GGTCGATTTTGGCCTGCCTATATTGCACCGAATGACGGTTGTACTGACCCCTGCAATTAT
AGAGGAGGATACAATGCTGAAAAATGTCTCAAAAATTGTGGAAAACCATCCCAGCTGCTA
TACCACGTTCCTCGTTCATGGCTGAAATCCAGTGGAAATGTCTTGGTGTTGTTTGAGGAA
ATGGGCGGGGATCCTACGAAGCTGTCTTTTGCAACAAGAGAGATACAAAGTGTATGCTCA
AGAATATCTGATGCTCATCCACTTCCTATTGATATGTGGGCTTCGGAAGACGATGCACGA
AAAAAGTCAGGGCCAACTCTATCTCTTGAGTGCCCTCATCCTAATCAAGTCATCTCATCA
ATCAAATTTGCAAGCTTTGGCACTCCTCAAGGAACATGCGGGAGCTTTATCCATGGTCGA
TGCAGTAGCAGCAATGCTCTTTCAATTGTAAAGAAGGCTTGCATTGGATCAAAAAGCTGT
AGTCTTGGAGTTTCAATAAATGCATTTGGTGATCCATGTAAAGGAGTCGCAAAAAGTTTA
GCTGTAGAAGCTTCTTGTACATGATGCCTCACGAAACTAATGAACCGAGAAGGCACGTTC
CTTAAGTGTTAAAGTAGTATAAGGTCAGATAAACCATTACTAAGTTACAGCTTCAGAAAG
ATAGTGCTTAGCTACATATACATCATGGAGAGGAAGACCACTTTGGCTTCCCTCACCGAT
TTGATGAAATTATAATAAAAGAAAACTAGCTTCAATACTTTTGCTTTGCTCTCCAACTTG
ATGAGATTATAGTTTAGAAAAAAGT