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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g068920.1.1
CDS Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9P691_POPTR)
Sequence

ATGGAGGAAATTGATATTCCTTCTTATTTTCTATGTCCAATCTCAATGGAAGTTATGAGG
GATCCAGTTACGATATTAACTGGAATAACATATGATCGACAAAATATAGAAAAATGGTTA
TTTTCATGCAAACACACAACTTGTCCTGTCACAAATCAAGATCTAAAATTCAAAGATCTT
ACTCCAAATCATAATCTACGACGTTTGATTCAATCGTGGTGCATGTTGAATTCTTCAAAT
GGTATCCAAAGGATGCCAACCCCGAAGCCTCAGGTTCAAAGGGCTCACGTTGTTAGAATA
TTGAACGAAGCACAAAAAAATCCGGATATGGAGTTAGATTGCCTTAGGAGGATCAAATCA
ATAGCGCGTGTAAGTGAGAGTAATAAAATGTGTCTAGAGTCAGCAGGGGTAGTTGATTTC
TTGACCTCGATTGTGATGAAGAAAAAAGAAGAACCAGAGGCGAGTGATGAAGCTTTGAAT
ATTCTTTTTCATCTAAACCCTTCTGATACTGAGTTGAAAAAGTTGATCAACTCGCATAAT
GATAATCAATTCTTGGATTCTTTACTTCAATTCTTGAATAATGGTCATGTTCAATCGCGA
ACAAACGCGATAGCCCTATTGAGATCAACCCTTAGTATGGCTGATCCAGCTCAATTAATT
GGTATACAACCGGTGTATATCAAGGGTATAGTTTGTATATTAAATGACAAAGTCTCTCAA
CAAGCAACAAAACTAGCACTAAAGCTCCTAGTTGAATTATGTCCATGGGGAAGAAATAGA
ATAAAAGCAATTGAAAATGGAGCTGTATTTGCCCTAATTGAACTTCTTCTTGACACAAAT
GAAAGAAGGGTTTGCGAATTGATACTAACGGCTTTAGATCATCTGTGTACCTGTGCTGAT
GGGAGGTCGGAGTTGTTGAGACATGGTGGAGGTATAGCCATTGTTTCTAAGAAAATTCTT
AGGGTTTCACATTTGGCAAGTGATAGGGGAGTGAGGATCCTTTATTCAATTTCAAAATTT
TTAGCAACTTGTTATAGTACTAAAGTTCTTCAAGAGATGTTGCAAGTGGGAATTGTGTCA
AAGTTGTGTTTGGTTCTTCAAGTGGATGTTAGTCCAAAGACTAAAGAGAAAGCTAAGGAA
ATTTTAAGGTTACATTCTAGGGTTTGGAGAGATTCTTCTTGTATTCCTCCTCATTTGCTT
TCTTCTTATCCTTGA

Peptide Sequence

PEP ID

Solyc11g068920.1.1
PEP Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9P691_POPTR)
Sequence

MEEIDIPSYFLCPISMEVMRDPVTILTGITYDRQNIEKWLFSCKHTTCPVTNQDLKFKDL
TPNHNLRRLIQSWCMLNSSNGIQRMPTPKPQVQRAHVVRILNEAQKNPDMELDCLRRIKS
IARVSESNKMCLESAGVVDFLTSIVMKKKEEPEASDEALNILFHLNPSDTELKKLINSHN
DNQFLDSLLQFLNNGHVQSRTNAIALLRSTLSMADPAQLIGIQPVYIKGIVCILNDKVSQ
QATKLALKLLVELCPWGRNRIKAIENGAVFALIELLLDTNERRVCELILTALDHLCTCAD
GRSELLRHGGGIAIVSKKILRVSHLASDRGVRILYSISKFLATCYSTKVLQEMLQVGIVS
KLCLVLQVDVSPKTKEKAKEILRLHSRVWRDSSCIPPHLLSSYP*

Transcript Sequence

Transcript ID

Solyc11g068920.1.1
Transcript Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9P691_POPTR)
Sequence

ATGGAGGAAATTGATATTCCTTCTTATTTTCTATGTCCAATCTCAATGGAAGTTATGAGG
GATCCAGTTACGATATTAACTGGAATAACATATGATCGACAAAATATAGAAAAATGGTTA
TTTTCATGCAAACACACAACTTGTCCTGTCACAAATCAAGATCTAAAATTCAAAGATCTT
ACTCCAAATCATAATCTACGACGTTTGATTCAATCGTGGTGCATGTTGAATTCTTCAAAT
GGTATCCAAAGGATGCCAACCCCGAAGCCTCAGGTTCAAAGGGCTCACGTTGTTAGAATA
TTGAACGAAGCACAAAAAAATCCGGATATGGAGTTAGATTGCCTTAGGAGGATCAAATCA
ATAGCGCGTGTAAGTGAGAGTAATAAAATGTGTCTAGAGTCAGCAGGGGTAGTTGATTTC
TTGACCTCGATTGTGATGAAGAAAAAAGAAGAACCAGAGGCGAGTGATGAAGCTTTGAAT
ATTCTTTTTCATCTAAACCCTTCTGATACTGAGTTGAAAAAGTTGATCAACTCGCATAAT
GATAATCAATTCTTGGATTCTTTACTTCAATTCTTGAATAATGGTCATGTTCAATCGCGA
ACAAACGCGATAGCCCTATTGAGATCAACCCTTAGTATGGCTGATCCAGCTCAATTAATT
GGTATACAACCGGTGTATATCAAGGGTATAGTTTGTATATTAAATGACAAAGTCTCTCAA
CAAGCAACAAAACTAGCACTAAAGCTCCTAGTTGAATTATGTCCATGGGGAAGAAATAGA
ATAAAAGCAATTGAAAATGGAGCTGTATTTGCCCTAATTGAACTTCTTCTTGACACAAAT
GAAAGAAGGGTTTGCGAATTGATACTAACGGCTTTAGATCATCTGTGTACCTGTGCTGAT
GGGAGGTCGGAGTTGTTGAGACATGGTGGAGGTATAGCCATTGTTTCTAAGAAAATTCTT
AGGGTTTCACATTTGGCAAGTGATAGGGGAGTGAGGATCCTTTATTCAATTTCAAAATTT
TTAGCAACTTGTTATAGTACTAAAGTTCTTCAAGAGATGTTGCAAGTGGGAATTGTGTCA
AAGTTGTGTTTGGTTCTTCAAGTGGATGTTAGTCCAAAGACTAAAGAGAAAGCTAAGGAA
ATTTTAAGGTTACATTCTAGGGTTTGGAGAGATTCTTCTTGTATTCCTCCTCATTTGCTT
TCTTCTTATCCTTGA