Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g068830.2.1
CDS Infomation

bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase-like protein
Sequence

ATGGTGTCGGAAACAATGGAGTCGATAATCCTTCAGCTTCACGACATCGCCGCCGTTAAA
TTCGGCGAATTCAAGCTCAAATCCGGTATCTTTTCCCCAATCTACATTGACCTCCGGTTA
ATCGTTTCATACCCTTCGATTCTCCGTCAGATTTCACAAATTCTGGTTGGTTCACTGCCG
GAATCTACCAAATACGATGTTGTTTGCGGTGTACCGTACACGGCGTTGCCTATTGCGACG
TGTATCTCAACTGCACATGACTTGCCGATGGTAATGCGGAGGAAAGAGGTTAAGGATTAT
GGAACTGCTAAGGCTATTGAAGGTGCTTTTGAACCGGGTCAAGCTTGTCTTATTGTTGAG
GATTTGGTTACTAGTGGTGCTTCGGTACTTGAGACTGCTGCTCCTCTTCGTGCTGTTGGA
TTGAAGGTTACTGATGCTGTTGTCATGATTGACAGAGAGCAAGGAGGAAGGGAAAATTTG
GCTGATAATGGAATCACATTGCATTCAATGGTGAAACTTACTGAGATGGTGAGGATACTA
AAGGAAAAGGGTAGGGTTTCAGAGGAAACAGAAAAAATGGTGAAGAAATTCTTGGAGGAG
AATCGCAAGGTTGCGGTTCCTGCACCAGTGAAGGAAACAAAGGTCAAGACCAGATTACCA
TATGACGAGCGGGCAAAGACTGCAAAGAACCCTACTGGGAAGAAGTTGTTTGAAATCATG
GTGCAGAAGAACACTAATTTGTGTTTGGCTGCCGATGTGGCCACAGCTGCTGAACTACTG
GATATTGCTGACAAGGTTGGACCTGAAATCTGCATGTTAAAAACACATGTTGATATATTG
CCTGATTTTACTCCTGACTTTGGTTCTAAGCTTAGATCGATTGCAGACAAGCACAACTTC
TTAATATTTGAAGATCGTAAATTTGCTGACATTGGAAATACAGTGACAATGCAAGCTGAA
GGAGGTATCTTCCGCATTTTAGATTGGGCTGATGTAATTAATGCACACATTATTTCTGGT
CCAGGAATTGTTGATGGTCTGAAACTGAAGGGATTGCCGCGTGGAAGGGGCCTGCTGCTT
CTTGCTGAAATGAGTTCTGCGGGTAACCTAGCCACAGGGGATTACACAGCAGCAGCAGTA
AAAATTGCCGAGGATCACTCGGATTTTGTCATTGGGTTCATCTCTGTGAATCCTGCTTCA
TGGCCCAATGGACCTGGAAACCCATCCTTCATCCACGCTACACCTGGTGTTCAATTGGTA
AAAGGAGGAGATGCCCTAGGCCAACAATATAACACTCCAAATTCAGTAATTGGTGATAGA
GGCAGTGACATTATTATTGTTGGCCGTGGAATTATAAAGGCTGCTAACCCTGCAGAAGCA
GCTCGTGAATACCGGCTTCAAGGTTGGGATGCATATTTGGTTAACACCAAGTAA

Peptide Sequence

PEP ID

Solyc11g068830.2.1
PEP Infomation

bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase-like protein
Sequence

MVSETMESIILQLHDIAAVKFGEFKLKSGIFSPIYIDLRLIVSYPSILRQISQILVGSLP
ESTKYDVVCGVPYTALPIATCISTAHDLPMVMRRKEVKDYGTAKAIEGAFEPGQACLIVE
DLVTSGASVLETAAPLRAVGLKVTDAVVMIDREQGGRENLADNGITLHSMVKLTEMVRIL
KEKGRVSEETEKMVKKFLEENRKVAVPAPVKETKVKTRLPYDERAKTAKNPTGKKLFEIM
VQKNTNLCLAADVATAAELLDIADKVGPEICMLKTHVDILPDFTPDFGSKLRSIADKHNF
LIFEDRKFADIGNTVTMQAEGGIFRILDWADVINAHIISGPGIVDGLKLKGLPRGRGLLL
LAEMSSAGNLATGDYTAAAVKIAEDHSDFVIGFISVNPASWPNGPGNPSFIHATPGVQLV
KGGDALGQQYNTPNSVIGDRGSDIIIVGRGIIKAANPAEAAREYRLQGWDAYLVNTK*

Transcript Sequence

Transcript ID

Solyc11g068830.2.1
Transcript Infomation

bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase-like protein
Sequence

ATATTCGGAGAGTGTATCATATTTGCCCTAGACAAAACCTCTACCTACTTTCCCAACATG
AAAGTAAGTAACTATAAAAAGTGCTGTTTTCTTCAAACTTTGAACTCTACCCAGTAGCCA
CCTTCAATCTAAAAGCTCAAAGAAAATGGTGTCGGAAACAATGGAGTCGATAATCCTTCA
GCTTCACGACATCGCCGCCGTTAAATTCGGCGAATTCAAGCTCAAATCCGGTATCTTTTC
CCCAATCTACATTGACCTCCGGTTAATCGTTTCATACCCTTCGATTCTCCGTCAGATTTC
ACAAATTCTGGTTGGTTCACTGCCGGAATCTACCAAATACGATGTTGTTTGCGGTGTACC
GTACACGGCGTTGCCTATTGCGACGTGTATCTCAACTGCACATGACTTGCCGATGGTAAT
GCGGAGGAAAGAGGTTAAGGATTATGGAACTGCTAAGGCTATTGAAGGTGCTTTTGAACC
GGGTCAAGCTTGTCTTATTGTTGAGGATTTGGTTACTAGTGGTGCTTCGGTACTTGAGAC
TGCTGCTCCTCTTCGTGCTGTTGGATTGAAGGTTACTGATGCTGTTGTCATGATTGACAG
AGAGCAAGGAGGAAGGGAAAATTTGGCTGATAATGGAATCACATTGCATTCAATGGTGAA
ACTTACTGAGATGGTGAGGATACTAAAGGAAAAGGGTAGGGTTTCAGAGGAAACAGAAAA
AATGGTGAAGAAATTCTTGGAGGAGAATCGCAAGGTTGCGGTTCCTGCACCAGTGAAGGA
AACAAAGGTCAAGACCAGATTACCATATGACGAGCGGGCAAAGACTGCAAAGAACCCTAC
TGGGAAGAAGTTGTTTGAAATCATGGTGCAGAAGAACACTAATTTGTGTTTGGCTGCCGA
TGTGGCCACAGCTGCTGAACTACTGGATATTGCTGACAAGGTTGGACCTGAAATCTGCAT
GTTAAAAACACATGTTGATATATTGCCTGATTTTACTCCTGACTTTGGTTCTAAGCTTAG
ATCGATTGCAGACAAGCACAACTTCTTAATATTTGAAGATCGTAAATTTGCTGACATTGG
AAATACAGTGACAATGCAAGCTGAAGGAGGTATCTTCCGCATTTTAGATTGGGCTGATGT
AATTAATGCACACATTATTTCTGGTCCAGGAATTGTTGATGGTCTGAAACTGAAGGGATT
GCCGCGTGGAAGGGGCCTGCTGCTTCTTGCTGAAATGAGTTCTGCGGGTAACCTAGCCAC
AGGGGATTACACAGCAGCAGCAGTAAAAATTGCCGAGGATCACTCGGATTTTGTCATTGG
GTTCATCTCTGTGAATCCTGCTTCATGGCCCAATGGACCTGGAAACCCATCCTTCATCCA
CGCTACACCTGGTGTTCAATTGGTAAAAGGAGGAGATGCCCTAGGCCAACAATATAACAC
TCCAAATTCAGTAATTGGTGATAGAGGCAGTGACATTATTATTGTTGGCCGTGGAATTAT
AAAGGCTGCTAACCCTGCAGAAGCAGCTCGTGAATACCGGCTTCAAGGTTGGGATGCATA
TTTGGTTAACACCAAGTAAGAGTCAGTTGTAGTAGTAGGGAGGACGACGGGGGGCTTTCG
AGCCAGGAGTTCCTTCCAGTTTTTTGTTTTTCCTTTTGATCACGCCTTTTTCGCCCTTCC
ACAGCCAGTTGGGGCTCGAAATTGAGTGTTGATTCTAGATGTGTGCTTTCTAGACTACCA
TTTTCCATCTCTGATGATTTGAATAACTAGATGCATTGAAATACAATGAGTTTGGATGAA