Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g068660.2.1
CDS Infomation

OTU-like cysteine protease family protein (AHRD V3.3 *** B9HQ41_POPTR)
Sequence

ATGACTAGGATACTGGTTCAGCGCGGTTCTGCTGGAGCTTCATCGTCTTCATCCTCAAAT
CAAAACAGGTCATCAACTTCAATCCCTGGTTCGTCTTCTTCTTCAGCTCCAACCCAGCCA
CAGGCGTCTAGTAGTAGTCAGGTATTATCAGCTTTGAAAGATGATGATTTCGTGGAAGAA
ATACAAGAACAGGTTGCTTTAGAAGAGTCGTCCGTTGCTTCTTCAAACTATAAGGGTGAC
GGTGAATTGTTGGAAAGTTTGGGCAGCGAAGAAAGCAACAATGAAGAAAAGATTGTTGAC
AACGAGAAGAGAAATAGTGGTTTTGACAGTGAGGATTTGACAAGGAAATGTGATGGTTTA
GGAGTCGTGGAAGAGGAAAATGAGGAAAGTTCCGTTCAGAGGCTTGCACGTAGTTCATGT
CCACCTCCACCTCCTGTCCCGCCCCCGAAACCTGCTTCATTAAACTCAAGTCCTAGAAGA
TCTCTGACGGGCAGTTCACATGCTATCCGGATAGGATCATCTAGGGGAACTGCTGGGCGA
TCTACTGTCTCAACCAGGACTTCACCTGCTGGATCCAGGCCATCCTCTCCACGGTCACAT
TGTGAAAGCGAAGGTTATAATAGTGCTGATGAGCAGAACCCTAACTTCGGATCCTCATAT
GATGATGTGGAGAGAGAGCGGCAGTTCGAAATGGACTTAAGACGAGCCAAAGGCTTAGAA
GTTAAGAAAATGTTGGAAGATGGGAATTGCCTTTTCCGTGCTGTTGCTGACCAAGTATAT
GGTGATTCTGAAGCTTATGATTTGGTCAGGCAGATGTGCATTGACTACATGGAGCGGGAA
AGAGATCACTTCTCTCAGTTTATAACTGAAGGTTTCACTTCCTATTGCAAGAGAAAAAGG
AGAGACAAAGTTTATGGCAACAATGTGGAGATTCAAGCTTTATCTGAAATGTATAATCGC
CCTATTCATATATATTCTTATAGCACAGAACCAATCAATACATTCCACGGAAGTTATAAT
ACAGACAGCCCTCCTGTTCGACTCAGTTTTCATCATGGAAATCATTACAATTCACTTGTT
GATCCACGTCGACTAACTGTTGGTGCTGGCCTTGGGTTTAGCTCTCTACAAGGGAGGAAC
GTTGATAAGGATCAGGTCAAAGCAGCAATAAAAGCTCAACAGGATCAGCAAATTGATAAT
GCTCTTCTGGCTGAAGGACGCTTTTATTCAGATCTTGAGCTCACTGAAAAGGAGATTGAA
CGCATGGTAGTGGAAGCTTCTAGGGCTGAGTATGTTGCCAATGACAAGTTCAGACAGCAG
CTTGGTTGTCGAGAAACTTCCACTTCTAATGCTGAACCATCATCATCTGGAGCTAGGTCG
TCAGGAAGTGACACACATCAGGAAGGCATCCGAGAGGTCCTTAGCGACTGCATCCAGATT
ATGCTGTCGATGGGATTTAGCTATGCACGAGTGATAGAGGCTTATAGCATATTTGGGGAT
GATGTGGATTCCATGGTATGTTATCTCATCGAAACCAGCAATAGCAGCAGACGTAAAGGA
AAAGCAACTGAATGA

Peptide Sequence

PEP ID

Solyc11g068660.2.1
PEP Infomation

OTU-like cysteine protease family protein (AHRD V3.3 *** B9HQ41_POPTR)
Sequence

MTRILVQRGSAGASSSSSSNQNRSSTSIPGSSSSSAPTQPQASSSSQVLSALKDDDFVEE
IQEQVALEESSVASSNYKGDGELLESLGSEESNNEEKIVDNEKRNSGFDSEDLTRKCDGL
GVVEEENEESSVQRLARSSCPPPPPVPPPKPASLNSSPRRSLTGSSHAIRIGSSRGTAGR
STVSTRTSPAGSRPSSPRSHCESEGYNSADEQNPNFGSSYDDVERERQFEMDLRRAKGLE
VKKMLEDGNCLFRAVADQVYGDSEAYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKR
RDKVYGNNVEIQALSEMYNRPIHIYSYSTEPINTFHGSYNTDSPPVRLSFHHGNHYNSLV
DPRRLTVGAGLGFSSLQGRNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIE
RMVVEASRAEYVANDKFRQQLGCRETSTSNAEPSSSGARSSGSDTHQEGIREVLSDCIQI
MLSMGFSYARVIEAYSIFGDDVDSMVCYLIETSNSSRRKGKATE*

Transcript Sequence

Transcript ID

Solyc11g068660.2.1
Transcript Infomation

OTU-like cysteine protease family protein (AHRD V3.3 *** B9HQ41_POPTR)
Sequence

CATGTGAAAAAATTGAACTTAAAGATATTGGATATATTTTTATTTATTTATTTTAAATTG
TTTTAAAGAGTAAAAAACTCAGCCTCCCATTATTTCCACTTACCTCATCTGTCTCTCTCT
AGAAAAAACCCAGCTTTCTCTCTCTATACGTACACACGTATATATATCCATCTGCATACA
TATGTACATTTCTTCACCTAGAAGTTTATTTGTACCCATTTTCCCCATTTGTTCGGAATC
TTCATGTAATAAACCCTAGCTAGCTTCTACTAGCAGGTTCTGGTTGCTGGTGATTCTAAA
ATCAAAAATTAGTTCGTGAGTATAAGACAAAAGTTAGCTGCTGGGACAAATCGTTCAGCC
AAGGTATTGGTGTGACTGCCCCAAAGGCCAGGAAGCGTGACAAATTCAAAGCAAGGGCTT
TATTTCTCTAATTTCGGTTGAAGAAGACTACACAAAATGACTAGGATACTGGTTCAGCGC
GGTTCTGCTGGAGCTTCATCGTCTTCATCCTCAAATCAAAACAGGTCATCAACTTCAATC
CCTGGTTCGTCTTCTTCTTCAGCTCCAACCCAGCCACAGGCGTCTAGTAGTAGTCAGGTA
TTATCAGCTTTGAAAGATGATGATTTCGTGGAAGAAATACAAGAACAGGTTGCTTTAGAA
GAGTCGTCCGTTGCTTCTTCAAACTATAAGGGTGACGGTGAATTGTTGGAAAGTTTGGGC
AGCGAAGAAAGCAACAATGAAGAAAAGATTGTTGACAACGAGAAGAGAAATAGTGGTTTT
GACAGTGAGGATTTGACAAGGAAATGTGATGGTTTAGGAGTCGTGGAAGAGGAAAATGAG
GAAAGTTCCGTTCAGAGGCTTGCACGTAGTTCATGTCCACCTCCACCTCCTGTCCCGCCC
CCGAAACCTGCTTCATTAAACTCAAGTCCTAGAAGATCTCTGACGGGCAGTTCACATGCT
ATCCGGATAGGATCATCTAGGGGAACTGCTGGGCGATCTACTGTCTCAACCAGGACTTCA
CCTGCTGGATCCAGGCCATCCTCTCCACGGTCACATTGTGAAAGCGAAGGTTATAATAGT
GCTGATGAGCAGAACCCTAACTTCGGATCCTCATATGATGATGTGGAGAGAGAGCGGCAG
TTCGAAATGGACTTAAGACGAGCCAAAGGCTTAGAAGTTAAGAAAATGTTGGAAGATGGG
AATTGCCTTTTCCGTGCTGTTGCTGACCAAGTATATGGTGATTCTGAAGCTTATGATTTG
GTCAGGCAGATGTGCATTGACTACATGGAGCGGGAAAGAGATCACTTCTCTCAGTTTATA
ACTGAAGGTTTCACTTCCTATTGCAAGAGAAAAAGGAGAGACAAAGTTTATGGCAACAAT
GTGGAGATTCAAGCTTTATCTGAAATGTATAATCGCCCTATTCATATATATTCTTATAGC
ACAGAACCAATCAATACATTCCACGGAAGTTATAATACAGACAGCCCTCCTGTTCGACTC
AGTTTTCATCATGGAAATCATTACAATTCACTTGTTGATCCACGTCGACTAACTGTTGGT
GCTGGCCTTGGGTTTAGCTCTCTACAAGGGAGGAACGTTGATAAGGATCAGGTCAAAGCA
GCAATAAAAGCTCAACAGGATCAGCAAATTGATAATGCTCTTCTGGCTGAAGGACGCTTT
TATTCAGATCTTGAGCTCACTGAAAAGGAGATTGAACGCATGGTAGTGGAAGCTTCTAGG
GCTGAGTATGTTGCCAATGACAAGTTCAGACAGCAGCTTGGTTGTCGAGAAACTTCCACT
TCTAATGCTGAACCATCATCATCTGGAGCTAGGTCGTCAGGAAGTGACACACATCAGGAA
GGCATCCGAGAGGTCCTTAGCGACTGCATCCAGATTATGCTGTCGATGGGATTTAGCTAT
GCACGAGTGATAGAGGCTTATAGCATATTTGGGGATGATGTGGATTCCATGGTATGTTAT
CTCATCGAAACCAGCAATAGCAGCAGACGTAAAGGAAAAGCAACTGAATGATGAGATAAT
AGTTTCTTCTTTCTGTCTAGTACTAGTATGACTGTATCTTATCTCGCTGAAACCTTGAAC
GCGTTATTTTCTGCCTTAAATCTACCCACTGGTGTGTTTCGGGTTGTGGCGTTGGAGCTT
GACTTCCTTTCTTCTCTGCTTCTACTTCTGGTAGTAGGGACTGATAAATGTTTGCATCTT
CAAATAATTTCTGTTTCACTTGGTGTTCTACAGACAGGTCCTCCTCAATAAATAACCTTT
TCTTGAATTTACCAAATTTGTTTTTGACTATTTCTGTTGTATCATGCACATATGATCAGA
GTGATACGTATCTATATATGTTTAAAACGGTACGTAGACGTGCTACTGGGCTGAAAACGT
AGTAAAGAACATAACTAAAAGTGTCTTTACTTGATATTAATTAATAATACAAATTGCATG
TTATAATCTGGAAACAACTTATTTTTCGATAGTTTCAATGGTTAACTGTCTGCAAATCAA
TGTGATAACTGCCGGCAAATTAATATGAAGCTCGAAGTTAACATCTCTAAGTAGCATGTT
ATGGAAATTACATTTGTAACTAAGCAAAAAATTTATAACTATGCATGTAGTCGCACCACC
AAAGTAAAATATG