Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g068500.2.1
CDS Infomation

Protein transport protein Sec24-like (AHRD V3.3 *** A0A0B2S359_GLYSO)
Sequence

ATGGCGGTGCGTGCAACGGTTACTCGGTTTCCGATTGACCTAGAGTCACTAATGGACTCA
GGGCTACCGTGGGGTGTAACAGTTTCACCGTTTGCTGCAAAGGATGAGAATGGGAATCCA
CCGGTTTATGGATCGGAAGGTCACTTGCTACCGCGATGTGAGAATTGTTGGGCTTACTAT
AATACATACTGTGAGCAAGAGCAATGGGCTTGGACTTGTTCCCTTTGTGGTACACTTAAT
GGACTATCTTCTCAGTCTGTCAGTCGTTATTCTCAACCTGAATCTTGCCCGGAGAATATG
TCTTCGTTTATTGACCTTGAATTGCCCATGGAAGAATCTGAGGAAATGCAGGCACGGCCT
GTTTATGTAGCAGCTGTTGATCTTGCTTCATCCGAGGAGTTTTTGGAACTTGTTAAAAGT
GCCCTTTTAGCTGCTTTAGAAGCTCTTGGGCCTGGATCACTATTTGGCTTGGCCACATTC
AGCCATAAAATAGGTTTGTATGATGTTCAAGGCCCCATTCCAGTGGTGAAGAATGTTTTC
ATTCCTCATGATTCTGATGGTACCTTGTCTATGGAACTTCAGGATGTCATGCCCCTATCT
TCATTCTTAGCTCCAGTGGATACTTGTAAGGACCGCATAGCGTCAGCACTTGAAACATTG
AGGCCAACAACTTCATGGGAAAGGACATCAGGTGCAGGTCAAGGGCTAGATGGAGCTTTC
CTGGGTGGAAGGGGTTTTGGATCTGCAATGGAAGCCCTTTTCAATTATATTGGATCAGAA
TATGGAAATACATTTGCATTAGCTAGAGTTTTTGCTTTTCTTTCGGGTGCTCCCGATATT
GGAGCTGGCCAACTAGATACAAGACGATATGGAGAGCAGTACGCTAGTAGACGAGAGGAT
GCAGATCGAGCTTTACTTCCCGAACAAACTCCGTTCTATAAAGATCTGGCTGCCGTGGCT
GTGCAATCAGGTGTTTGTGTAGACATATTTGCTGTGACAAATGAGTATACTGACTTGGCA
TCATTGAAGTTTCTGAGTATTGAGAGTGGAGGCTCCTTATTTTTGTATACGAGCACTGAT
GACTCCACACTTCCTCAAGACATGTACCGCATGTTAAGTCGACCATATGCTTTTAATTGT
GTCCTAAGGCTGAGGACTTCGTCTGAATTCCAGCAGAGTCATTCTTATGGGCATTTCTTC
CCAGATCCACAATATGAAAATGTCCAACACATAATTTGTTGTGATTCTTTCGCGACATAT
GCCTATGATTTTGAGTTTGTGAATAGTGCTGGATTTTCCAGGCATACTTCAGAATTGCCT
ATGCTGCAAATTGCTTTTCAGTATACTGTTGTTGTCCCACCAGATGAACTAGCAAATGCA
GGATCAAATACTACAACAAGAGCAAAGCATTCTCTCAAAAAGAGATTAAGGATTCGAACT
CTTCAGTTTGGAGTAGGTCATAGCATAAATGAGATTTATGACTGTGTTGATTCTGAAGTG
GTGCTTTCATTACTTGTCCACAAGGTTATTCTAGCCTCGTTGGAGCAAGGTGTTCGAGAG
GGCAGAATGTTACTTCATGATTGGCTTGTTATTCTTACAGCTCAGTATAATGATGCTTGT
AAACTTATTCAGTCTGGGCATGGTGGTTCAAGTGGCGTTCACATTGATGTTGCATTTTCC
CAATGTCCTCAACTGCAGCCTTTACCCCGCTTGGTTTTTGCTCTATTACGAAATCCTCTT
CTCCGTTTACACGAAGAAGGCGTGCATCCTGACTACCGAATATATCTTCAGTGTCTTTTT
AGTGCACTAGAACCTTCTTCTCTTAGTCGTGCTGTATATCCATTGTTAACCTCATATGCC
TCACCGGATAAGCAAGCATATCCTCGACATTCCCTCAGCCGAGCTGCACTGATTACAAGT
GGCAGTTCGATATTTTTCCTTGATGCATTCACAAATCTCATTGTGTTCTATGCTTCGACA
GCAGAACCTTCACTTCCGTTTCCGCCACCTCAGGACTGTTTACTGAGAACAACAATAAAC
AAGCTTAAGCAAGAGAGGTGTATTACACCGAGACTTTCATTTATCAAGGGAGGGCAGGAT
GATGCAACGGCGTTTGAGAACTATCTAATAGAGGAACAAGACGTTGAAGGAAGTGGCTTT
ACAAGTGTCATGGGTTTCGTTTCATTCCTCGATGAGATTAACCAAAGCACATTGGAGTAC
TTGAAATAA

Peptide Sequence

PEP ID

Solyc11g068500.2.1
PEP Infomation

Protein transport protein Sec24-like (AHRD V3.3 *** A0A0B2S359_GLYSO)
Sequence

MAVRATVTRFPIDLESLMDSGLPWGVTVSPFAAKDENGNPPVYGSEGHLLPRCENCWAYY
NTYCEQEQWAWTCSLCGTLNGLSSQSVSRYSQPESCPENMSSFIDLELPMEESEEMQARP
VYVAAVDLASSEEFLELVKSALLAALEALGPGSLFGLATFSHKIGLYDVQGPIPVVKNVF
IPHDSDGTLSMELQDVMPLSSFLAPVDTCKDRIASALETLRPTTSWERTSGAGQGLDGAF
LGGRGFGSAMEALFNYIGSEYGNTFALARVFAFLSGAPDIGAGQLDTRRYGEQYASRRED
ADRALLPEQTPFYKDLAAVAVQSGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTD
DSTLPQDMYRMLSRPYAFNCVLRLRTSSEFQQSHSYGHFFPDPQYENVQHIICCDSFATY
AYDFEFVNSAGFSRHTSELPMLQIAFQYTVVVPPDELANAGSNTTTRAKHSLKKRLRIRT
LQFGVGHSINEIYDCVDSEVVLSLLVHKVILASLEQGVREGRMLLHDWLVILTAQYNDAC
KLIQSGHGGSSGVHIDVAFSQCPQLQPLPRLVFALLRNPLLRLHEEGVHPDYRIYLQCLF
SALEPSSLSRAVYPLLTSYASPDKQAYPRHSLSRAALITSGSSIFFLDAFTNLIVFYAST
AEPSLPFPPPQDCLLRTTINKLKQERCITPRLSFIKGGQDDATAFENYLIEEQDVEGSGF
TSVMGFVSFLDEINQSTLEYLK*

Transcript Sequence

Transcript ID

Solyc11g068500.2.1
Transcript Infomation

Protein transport protein Sec24-like (AHRD V3.3 *** A0A0B2S359_GLYSO)
Sequence

ACACCCATCTTCTTCACACAAAAACAGAACCTCAAAAAAAACCCAAATATTATTTTTTTT
CTCCATTTTCACTGTCACCAGCTCTAATCTCACGCGCTAATGGCGGTGCGTGCAACGGTT
ACTCGGTTTCCGATTGACCTAGAGTCACTAATGGACTCAGGGCTACCGTGGGGTGTAACA
GTTTCACCGTTTGCTGCAAAGGATGAGAATGGGAATCCACCGGTTTATGGATCGGAAGGT
CACTTGCTACCGCGATGTGAGAATTGTTGGGCTTACTATAATACATACTGTGAGCAAGAG
CAATGGGCTTGGACTTGTTCCCTTTGTGGTACACTTAATGGACTATCTTCTCAGTCTGTC
AGTCGTTATTCTCAACCTGAATCTTGCCCGGAGAATATGTCTTCGTTTATTGACCTTGAA
TTGCCCATGGAAGAATCTGAGGAAATGCAGGCACGGCCTGTTTATGTAGCAGCTGTTGAT
CTTGCTTCATCCGAGGAGTTTTTGGAACTTGTTAAAAGTGCCCTTTTAGCTGCTTTAGAA
GCTCTTGGGCCTGGATCACTATTTGGCTTGGCCACATTCAGCCATAAAATAGGTTTGTAT
GATGTTCAAGGCCCCATTCCAGTGGTGAAGAATGTTTTCATTCCTCATGATTCTGATGGT
ACCTTGTCTATGGAACTTCAGGATGTCATGCCCCTATCTTCATTCTTAGCTCCAGTGGAT
ACTTGTAAGGACCGCATAGCGTCAGCACTTGAAACATTGAGGCCAACAACTTCATGGGAA
AGGACATCAGGTGCAGGTCAAGGGCTAGATGGAGCTTTCCTGGGTGGAAGGGGTTTTGGA
TCTGCAATGGAAGCCCTTTTCAATTATATTGGATCAGAATATGGAAATACATTTGCATTA
GCTAGAGTTTTTGCTTTTCTTTCGGGTGCTCCCGATATTGGAGCTGGCCAACTAGATACA
AGACGATATGGAGAGCAGTACGCTAGTAGACGAGAGGATGCAGATCGAGCTTTACTTCCC
GAACAAACTCCGTTCTATAAAGATCTGGCTGCCGTGGCTGTGCAATCAGGTGTTTGTGTA
GACATATTTGCTGTGACAAATGAGTATACTGACTTGGCATCATTGAAGTTTCTGAGTATT
GAGAGTGGAGGCTCCTTATTTTTGTATACGAGCACTGATGACTCCACACTTCCTCAAGAC
ATGTACCGCATGTTAAGTCGACCATATGCTTTTAATTGTGTCCTAAGGCTGAGGACTTCG
TCTGAATTCCAGCAGAGTCATTCTTATGGGCATTTCTTCCCAGATCCACAATATGAAAAT
GTCCAACACATAATTTGTTGTGATTCTTTCGCGACATATGCCTATGATTTTGAGTTTGTG
AATAGTGCTGGATTTTCCAGGCATACTTCAGAATTGCCTATGCTGCAAATTGCTTTTCAG
TATACTGTTGTTGTCCCACCAGATGAACTAGCAAATGCAGGATCAAATACTACAACAAGA
GCAAAGCATTCTCTCAAAAAGAGATTAAGGATTCGAACTCTTCAGTTTGGAGTAGGTCAT
AGCATAAATGAGATTTATGACTGTGTTGATTCTGAAGTGGTGCTTTCATTACTTGTCCAC
AAGGTTATTCTAGCCTCGTTGGAGCAAGGTGTTCGAGAGGGCAGAATGTTACTTCATGAT
TGGCTTGTTATTCTTACAGCTCAGTATAATGATGCTTGTAAACTTATTCAGTCTGGGCAT
GGTGGTTCAAGTGGCGTTCACATTGATGTTGCATTTTCCCAATGTCCTCAACTGCAGCCT
TTACCCCGCTTGGTTTTTGCTCTATTACGAAATCCTCTTCTCCGTTTACACGAAGAAGGC
GTGCATCCTGACTACCGAATATATCTTCAGTGTCTTTTTAGTGCACTAGAACCTTCTTCT
CTTAGTCGTGCTGTATATCCATTGTTAACCTCATATGCCTCACCGGATAAGCAAGCATAT
CCTCGACATTCCCTCAGCCGAGCTGCACTGATTACAAGTGGCAGTTCGATATTTTTCCTT
GATGCATTCACAAATCTCATTGTGTTCTATGCTTCGACAGCAGAACCTTCACTTCCGTTT
CCGCCACCTCAGGACTGTTTACTGAGAACAACAATAAACAAGCTTAAGCAAGAGAGGTGT
ATTACACCGAGACTTTCATTTATCAAGGGAGGGCAGGATGATGCAACGGCGTTTGAGAAC
TATCTAATAGAGGAACAAGACGTTGAAGGAAGTGGCTTTACAAGTGTCATGGGTTTCGTT
TCATTCCTCGATGAGATTAACCAAAGCACATTGGAGTACTTGAAATAAGTTGCATCCATC
TTTCAACACCACAGGTTATGACGGGAAGTAGGTACCTCCAAACTCACTGTACAATTCGAC
AAAAAACAGTTATATCATCGACAACCAATGAACAAGTCCAAACTTTTGCAACAAAGGGTT
ACATGTAGCATCACAGCAAGTATTTCTGACTTACTCAGAGCAGTTGAACCGGTGTCACCT
CCCAAGAGCGTATCGTTTTATGTTTCCCAGTTCAGCTTTAGACAGTAGATTTGCTCATTC
AAAATTTGTACCAGAAGCTGGATCAAACTCTTATCTTTTTCTTGGGTTGATACCTTAAAT
ATAGAATAAATAGCTGTGTTTTTGAACCAGAATTTTGTTGTTTGTCAGGTTTTCTGTTGT
TTTCTTAATTCACACATTTGGTTCTGTTGGTGCATTGGCATATGGAAATTGAATGTAATT
CTTGTGTTTTTGTTCTTGTGAAGTACAAAGTTTTGTTTTCATTAGCAA