Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g066850.2.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S769_RICCO)
Sequence	GGCGGCCGCCGGCATCATCGCCACCACCTCTTACCTTCATCACCCTTTTTCCTTCCCCTA AAACCCCTTTCATTATCTCCCTCAATATCCCTTTACACCCCCTTTTCTTCATCTTCCACT TCACCCCAACAACTTCTACTCGATTCCCAAGAAAATCAAGTTGATTTCGACAATTGGGAC CCCGTTTCTGCTTCTGGGGTTGCTGAAAGTTTCAATTTTGATGATTCTTTTGACTCTGTG GAGTTGAAGAAGTTTGAAACCCCATCTATTGAGGTGAGGGAATTAGAGGATATACCTGAT CAATGGCGTAGGGCAAGATTAGCTTGGCTTTGTAAAGAGCTTCCTGCTCACAGGACGCCT ACTATGGTTAGGATTTTGAATGCACAAAGGAAGTGGTTTAGGCAAGAAGATGGGAGTTTT GTTGCTGTTCATTGTATGCGAATTCGCGAAAATGAAGCTGCTTTTAGGGTTTACAAATGG ATGATGCCGCAACATTGGTTTCGATTTGATTTTGCTCTAGCTACAAAACTAGCAGATTAC TTGGGAAAGGAACGAAAGCACTTGAAGTGCCGGGAGATTTTTGATGACATAATTAATCAG GGACGAGTGCCTTGTGAATCTACATTCCATATTCTCATTATTGCCTATCTTAGTTCATCT GGACCATCAGTGCTAGATGAAGCATGTAACATCTACAATCGCATGGTGCACTTGGGAGGT TATAAGCCTCGGCTTAACTTACACAATTCTCTGTTTAAAGCTCTTTTGGGGAAGACATCG AGCGAGAGTAAACAATTTCTGAAACAGGCTGAATTTATATATCAGAACTTGACTTCCTCT GGATTGGAAATACACAGAGATATTTTCGGGGGTCTTATATGGCTTCACAGTTATCAAGAT GTGGTCGATATGGAAAGAATCGCTGCACTAAGAGCAGAAATGCGGTCTAGAGGAATTGAA GAGAGCAAAGAGGTACTTGTGTCAGTTTTAAGAGCTTGCTCGAAGGATGGAAATGTGGAG GAAGCCGAAAGAACTTGGTCAAAACTTCTCTCCATCGATGGCTGTCCTCCTTCTCAAGCT TTTGTCTATCGTATGGAAGTATATGCAAAGATTGGAGAACCTACAAAATCTTTGAAAGTA TTTAGGAGGATGCAGGAACAACTGGGTTCCACCTCCGTTGCAGCATACCATAAAATAATA AAGGTGCTGTCTAAATATCAAAAACTAGACCTTGCAGATTCTATCATGTCTGAGTTCATA AACAGTGGTATGAAACAGCTGGTCCCATCATTCATCGATTTGATGAGGATGTACTCCATT GCAGGTTTACATGAGAAACTGGAATCTACCTTTCTCCGGTACCGTGAAGTCTGCCATCCG AATCTGACAGTTTTTAATATTTATTTGGATTTATTGGTGAATACTGGCAATCTGAGCCTC GCTGAAGAAATCTTCCATGAAATGCGTGGTAATGTGGCAATTGGTGTTGATTCTCGTGCT TGCAACAGTATCTTGAGAGGCTATATGACCTCTGCAGAGTATGTGAAGGCAGTAAAGATA TACAATTTGATGCGCCAAAAGAAATACGACGTTGAGATTGAATCTTCATTGATGGAAAGA CTTGATTATGTTCTTAGCTTGCGGGAGAAAGTAATTGAAAAACCTATTAGACTGAAGCTC ACAGCAGAGCAACGAGAGGTTTTGACAGGGTCGCTTCTTGGGGGTGTGCAAATTAGATCA GATGAAGAGAGAAGATTGCATGCAATCCATTATGAATTTAATGAAGAGTCGAGGATCCAT TCCATTTTTAAGAGACACATACATGATGAATTTCACGAGTGGTTAGGCTCTCATGATATG ATGGTGGATAGCACTGCGGACATTCCTAGTTCTTTTACTACCATTTCACATTCTGATTTT ACTTTCTATGCTGATCAGTTCTGGCCCAACGGACGTCCTTGTATACCAAAACTTATACAT AGATGGTTGTCACCTCGCGTTCTTGCTTACTGGTATATGTACGGTGGTTACCGGACATCA TCTGGTGATATTCTGTTGAGAGTAAAGGGAAGTTCAGAGGGTGTTGTGAGTATTCTTAAA GCACTAAAAGCCAAATCGTTACACTGCCGAGTAAAAAATAGAGGGAAGGTCTTTTGGATA GGATTTCTGGGGGACAATGCTACATTTTTCTGGAAGGTGGTAGAGCCCTTCATTATTGAT GAGTTAAAGGGACTCCTTAAAGCAGGTGGCGACTCAAATGGATCCCTGGAAACCCAATGT ATCAATTTTGACAGCGGATCAGAGTCCAACGAGAAGAATTCAGGTTATATCGAACCTGAC ACGTCCTTGTCTGATTGA

Peptide Sequence

PEP ID	Solyc11g066850.2.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S769_RICCO)
Sequence	GGRRHHRHHLLPSSPFFLPLKPLSLSPSISLYTPFSSSSTSPQQLLLDSQENQVDFDNWD PVSASGVAESFNFDDSFDSVELKKFETPSIEVRELEDIPDQWRRARLAWLCKELPAHRTP TMVRILNAQRKWFRQEDGSFVAVHCMRIRENEAAFRVYKWMMPQHWFRFDFALATKLADY LGKERKHLKCREIFDDIINQGRVPCESTFHILIIAYLSSSGPSVLDEACNIYNRMVHLGG YKPRLNLHNSLFKALLGKTSSESKQFLKQAEFIYQNLTSSGLEIHRDIFGGLIWLHSYQD VVDMERIAALRAEMRSRGIEESKEVLVSVLRACSKDGNVEEAERTWSKLLSIDGCPPSQA FVYRMEVYAKIGEPTKSLKVFRRMQEQLGSTSVAAYHKIIKVLSKYQKLDLADSIMSEFI NSGMKQLVPSFIDLMRMYSIAGLHEKLESTFLRYREVCHPNLTVFNIYLDLLVNTGNLSL AEEIFHEMRGNVAIGVDSRACNSILRGYMTSAEYVKAVKIYNLMRQKKYDVEIESSLMER LDYVLSLREKVIEKPIRLKLTAEQREVLTGSLLGGVQIRSDEERRLHAIHYEFNEESRIH SIFKRHIHDEFHEWLGSHDMMVDSTADIPSSFTTISHSDFTFYADQFWPNGRPCIPKLIH RWLSPRVLAYWYMYGGYRTSSGDILLRVKGSSEGVVSILKALKAKSLHCRVKNRGKVFWI GFLGDNATFFWKVVEPFIIDELKGLLKAGGDSNGSLETQCINFDSGSESNEKNSGYIEPD TSLSD*

Transcript Sequence

Transcript ID	Solyc11g066850.2.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S769_RICCO)
Sequence	GGCGGCCGCCGGCATCATCGCCACCACCTCTTACCTTCATCACCCTTTTTCCTTCCCCTA AAACCCCTTTCATTATCTCCCTCAATATCCCTTTACACCCCCTTTTCTTCATCTTCCACT TCACCCCAACAACTTCTACTCGATTCCCAAGAAAATCAAGTTGATTTCGACAATTGGGAC CCCGTTTCTGCTTCTGGGGTTGCTGAAAGTTTCAATTTTGATGATTCTTTTGACTCTGTG GAGTTGAAGAAGTTTGAAACCCCATCTATTGAGGTGAGGGAATTAGAGGATATACCTGAT CAATGGCGTAGGGCAAGATTAGCTTGGCTTTGTAAAGAGCTTCCTGCTCACAGGACGCCT ACTATGGTTAGGATTTTGAATGCACAAAGGAAGTGGTTTAGGCAAGAAGATGGGAGTTTT GTTGCTGTTCATTGTATGCGAATTCGCGAAAATGAAGCTGCTTTTAGGGTTTACAAATGG ATGATGCCGCAACATTGGTTTCGATTTGATTTTGCTCTAGCTACAAAACTAGCAGATTAC TTGGGAAAGGAACGAAAGCACTTGAAGTGCCGGGAGATTTTTGATGACATAATTAATCAG GGACGAGTGCCTTGTGAATCTACATTCCATATTCTCATTATTGCCTATCTTAGTTCATCT GGACCATCAGTGCTAGATGAAGCATGTAACATCTACAATCGCATGGTGCACTTGGGAGGT TATAAGCCTCGGCTTAACTTACACAATTCTCTGTTTAAAGCTCTTTTGGGGAAGACATCG AGCGAGAGTAAACAATTTCTGAAACAGGCTGAATTTATATATCAGAACTTGACTTCCTCT GGATTGGAAATACACAGAGATATTTTCGGGGGTCTTATATGGCTTCACAGTTATCAAGAT GTGGTCGATATGGAAAGAATCGCTGCACTAAGAGCAGAAATGCGGTCTAGAGGAATTGAA GAGAGCAAAGAGGTACTTGTGTCAGTTTTAAGAGCTTGCTCGAAGGATGGAAATGTGGAG GAAGCCGAAAGAACTTGGTCAAAACTTCTCTCCATCGATGGCTGTCCTCCTTCTCAAGCT TTTGTCTATCGTATGGAAGTATATGCAAAGATTGGAGAACCTACAAAATCTTTGAAAGTA TTTAGGAGGATGCAGGAACAACTGGGTTCCACCTCCGTTGCAGCATACCATAAAATAATA AAGGTGCTGTCTAAATATCAAAAACTAGACCTTGCAGATTCTATCATGTCTGAGTTCATA AACAGTGGTATGAAACAGCTGGTCCCATCATTCATCGATTTGATGAGGATGTACTCCATT GCAGGTTTACATGAGAAACTGGAATCTACCTTTCTCCGGTACCGTGAAGTCTGCCATCCG AATCTGACAGTTTTTAATATTTATTTGGATTTATTGGTGAATACTGGCAATCTGAGCCTC GCTGAAGAAATCTTCCATGAAATGCGTGGTAATGTGGCAATTGGTGTTGATTCTCGTGCT TGCAACAGTATCTTGAGAGGCTATATGACCTCTGCAGAGTATGTGAAGGCAGTAAAGATA TACAATTTGATGCGCCAAAAGAAATACGACGTTGAGATTGAATCTTCATTGATGGAAAGA CTTGATTATGTTCTTAGCTTGCGGGAGAAAGTAATTGAAAAACCTATTAGACTGAAGCTC ACAGCAGAGCAACGAGAGGTTTTGACAGGGTCGCTTCTTGGGGGTGTGCAAATTAGATCA GATGAAGAGAGAAGATTGCATGCAATCCATTATGAATTTAATGAAGAGTCGAGGATCCAT TCCATTTTTAAGAGACACATACATGATGAATTTCACGAGTGGTTAGGCTCTCATGATATG ATGGTGGATAGCACTGCGGACATTCCTAGTTCTTTTACTACCATTTCACATTCTGATTTT ACTTTCTATGCTGATCAGTTCTGGCCCAACGGACGTCCTTGTATACCAAAACTTATACAT AGATGGTTGTCACCTCGCGTTCTTGCTTACTGGTATATGTACGGTGGTTACCGGACATCA TCTGGTGATATTCTGTTGAGAGTAAAGGGAAGTTCAGAGGGTGTTGTGAGTATTCTTAAA GCACTAAAAGCCAAATCGTTACACTGCCGAGTAAAAAATAGAGGGAAGGTCTTTTGGATA GGATTTCTGGGGGACAATGCTACATTTTTCTGGAAGGTGGTAGAGCCCTTCATTATTGAT GAGTTAAAGGGACTCCTTAAAGCAGGTGGCGACTCAAATGGATCCCTGGAAACCCAATGT ATCAATTTTGACAGCGGATCAGAGTCCAACGAGAAGAATTCAGGTTATATCGAACCTGAC ACGTCCTTGTCTGATTGATGCATTGGTCTGTATGCCTTCTATTGCAAGGTGTAAAATTAT TTGAGATGAATAACGTTGCTGCGAAAGTTTTTGGCTGATAACGTGACGAAGTGCCTTCTG ATAGGACTTGTGGTTCATTCACAGTCAGCTCTGTTACAAGATACTACTCACAGCCCACAG ATTTGACAGATGTTCCTATATTTGTTGGGAATGAAGTGGGCTATGCCAAGAACAGCTGCT GATTTTGTTTCATCCTCGATCGGTATGACATCACTTTCTTAGTGCTGTAGCTTTATCAGC TTGCTTTGCACAGCTCGAAGAAGAAGACGATGTTCCGGCACCGGCGCCGGCGGAATTTGA CGTTTTTGGACATAGAAAGAAGTTTCTAGAACCTAATCCGATCAGTTTCTCTTCCCTGTC TAAACCTGGAACGGGAAAAATATCAGTTCGCCGTGAAAATCAACGGTTCAGATTCAGCGA TGAAGTGGATTAAACAGTTCTTACTTTCTAAACTGAACTGCGAGTAATGAAGATCGTAAT CGGCGGGATTGACGGATGTAAGAACCGGCCGCCTTCCTTCTTTCGAGTATTGCCGGAGAG CGGCAGCGATGAGATCCTGAACCGTCGATTCAAGCGAAATTAGAACATGTACAGGACCTA TACTTCTCTGAATCGTAACATTCAACAGCAGCTTCGTTAGCTTCAATTTGTCCATTTCCG GCGATTTACCGGTTCCGGCTGAAATTCTACCGGCGGAGAGCAAATCCGGTACTGTTCTCG GCCTTCGCAGCAACTCCGACGTACTACCCTCCGAACTCTGTACGTGAAACGACATTGATT TCTCCGATAACTTCCCCTTCCGATTCTTCTCCTCACTACCTCCTCTCCGGTGATTTCTCG GAGAAGGCATTTACGCTTTAATGTTTACCTGTGCGACGGTAGCGGATGAATACCTGTCAG TTTTCCGGTGACCGGCAGTGAACATAACCAGAATGGCAGAAGCGTAATTCAGATGAAGTA GAGGGACTAATTTACAATTGAAGAAAATGGTGTTCCCGCTTACTCCTATTTATATGGGGA TGAAGAAGATAAGGTCCATTGAGATTGGTCGAAATTCCTGTAAAATAAGAGCAATTTTTT TTTTTTAAATGTAAAAGTTTTATAATTATAATTATTTATTTCTTTTGTCTTTTTTCATGT GATAATATTTGATTTAAAATTTAATTTAAAATAAGTTTAAAAACTTTATGATTGAAAGAA AGATTATTCAGAATTTGTGGTTTGAAATACATTTT