Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g066790.2.1
CDS Infomation	Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1)
Sequence	ATGGCGGGGATCAAAGTCACGGAGGAGCTTGTTTCAATGGTGCGTTCAATTGTTGGCGAT GAATATACAGAGATGGACATAATTAGATCACTTCACATGGCGAAAAACGATCCTACAGCT GCAATAAACATCATTTTCGACACCCCGAGTTTTAAGAAAATTGAAATTCGCAATACCCAT TTGAATTCGGAAGCTGGGAATGTTAGTAGTAATAGTGGTAAGATTAAGGAAGCTGAGATT AGTACCCATTTGAATTCGGAAGCTGGGAATGTTAGTAGTAATAGTGGTAAGATCAAAGAA GATGAGATTAGTACAGTTTCTTTGAATGAAGGATTGGATTCTGAAAGGGAATTTGGGGAT AATGGGTTGGTGGGTAAGAGGGCTGGACGTGATATGGGTAGTGAATGTGGGAGTAATGAT TTGGTGGGTAAGAGAGCTGGGTGTCAAATGGGGAGTGAATGGTGGTATGTGGGGTGTGGT GAGGTTGCTGGTATGTCAACCTGTAAAGGGAGGATTGTGAAGCCTGGTGATGAAGTTGAT TTTACGTTCCCAGTGGAGAAGAAATTGAGTTCACCTTCACCTGGGAAGTTTGGAGGTGGA CGAGGGCGTCAAGCAGCTGCGTGTTCTGAAATTGTAAGGTTTTCTACAAAGGCTTGTGGA GAGATTGGGCGTATTCCAAATGAATGGGCTCGATGCATTCTGCCGCTGGTGAGGGATAAG AAGATTAGGATTGAAGGGTGTTGCAAATCAGTCCCTAATATATTGGGGATTATGGACTCT GTTCTTTTGTCTGTCAGAGTGCATATTAACAGTTCCATGTTTCGTAAAAGCCATCAGACA TCACTAAAGGCTAGAAGCAATCCCGCAGATGACACAGTTATTCACCCCCTTCCCACTTTG TTCCATTTGCTTGGGCTTACTCCTTTCAAGAAGGCAGAATTTACTCCAGCTGATTTATAC ACAAGGAAGCGACCTTTGAACGAACAGGACAGCTCCATAGGTCCTGCCTCAATATTGCGT GCAAACTTATCCAAAAGCTCCTCATCTGCAGATGGAAATGAAGTTGACAATGATGAGTCA ATTTCTGATACTGATCTTGACTATATTGTTGGTTTAGCTGATAGCTCGAAGCTACAGGAA ATGGAACCACCAAGTACGCTCCAGTGCGAACTGCGACCCTATCAGAAGCAGGCACTTCAT TGGATGACGCAACTGGAGAGGGGAAGAAACACGGATGAAGCAGCAACAACTCTGCACCCA TGTTGGAATGCTTACCGCCTGAAGGACGAGAGGGAGCTTGTTGTTTACTTGAATGCATTT TCGGGTGATGCAACCACTGAATTTCCGAGTACCCTTGAGATGGCTAGAGGAGGAATTTTG GCAGATTCCATGGGGCTAGGGAAGACTATAATGACTATATCTCTCCTCCTCAGTCATTCT GAAAGAGGTGGATCATCAGGAAGCCAATCGACAAGTCAGCTGTCCAGTGAAAACGGAGAA GCTAGTAATATCTTAGGTCATTCTCCAACTTTTGTGAAGAAATCAGCAAAAGTCTCTAGT CTTGATAAGCTTCTGAAACACAAGCCGAAACTTATCTCTGGTGGCAATCTGATTATATGT CCAATGACACTACTAGGTCAATGGAAGGCAGAGATTGAAGCCCATGCACAACCTGGGGCT CTATCTGTTTATGTTTATTATGGGCAGACAAGATCAAAGGATGCAAAAGTGCTTGCTCGA AGTGATGTCGTGCTAACGACATATGGGGTATTGGCCTCCGAATTTTCTGCTGAGAATGCT GAGGACAGTGGGGGCCTTCTCTCTATTAGATGGTTTAGAGTGGTGCTTGATGAGGCACAT ACTATCAAATCCTCCAAAAGCCAAATCTCAAATGCTGCCGCTGCTCTTATTGCTGACCGT CGGTGGTGTCTTACTGGTACCCCTATCCAGAACAATCTGGAGGACATTTACAGTCTACTA AGATTTTTGAGAGTCGAACCATGGGGAAGCTGGGCATGGTGGAACAAGCTTATTCAGAAA CCTTTTGAGGAGGGAGATGAGAGGGGGCTAAAGTTGGTTCAATCAATATTAAGTCTGATT ATGTTGAGAAGAACAAAGTCTAGTACAGATAGGGAAGGAAGACCAATTTTAGTTCTACCA CCAGCAGATATTCAAGTGATATATTGTGAACTTACAGAAGCAGAGCGCGACTTCTATGAT GCTTTGTATAAAAGATCCAAGGTGAAGTTTGATCAGTTTGTTGAGCAAGGACGGGTTCTC CACAACTATGCTTCTATATTGGAGTTGCTTTTGCGACTTCGTCAATGCTGTGACCATCCG TTTCTTGTCATGAGTCGAGGTGATACTCAAGAATTCTCTGATCTAAATAAGCTTGCTAAA CGTTTCCTCAAGGGTGGTAAGGAGACTGGAGAAGGCAAGGATGTCCCTTCACGTGCTTAT ATTCAAGAGGTTGTGGAAGAGTTGCGGAATGGAGAACAGGGTGAATGCCCTATTTGTCTT GAAGCTTTTGAAGATGCGGTGTTGACTCCATGTGCTCATAGGTTATGTCGAGAGTGTCTT TTGGCAAGCTGGCGAAGTTCTAATTCAGGCCTCTGTCCTGTTTGTAGAAACACTGTCAGT AGGCAGGAGCTTATAACAGCACCATCAGACAACCGCTTTCAGGTTGATGTTGAAAAGAAT TGGGTGGAGTCATCAAAAGTATCAGCCTTGTTGTCTGAATTAAAACGTCTTCATTCTGTT GGCTCCAAAAGCATTGTTTTTAGTCAGTGGACTGCCTTCTTAGATCTACTGCAGATTCCT CTTTCTCGTAGTAGTATTCCATTTGTTCGCCTTGATGGGACGTTAAACCAACAACAACGT GAGAAAGTAATAAAGAAGTTCTCAGAAGAGGATGACATATCGGTGTTGCTAATGTCATTG AAGGCTGGTGGTGTTGGGATAAACCTGACGGCTGCATCTAATGCTTTTGTCATGGATCCT TGGTGGAATCCAGCTGTTGAGGAGCAAGCAGTCATGCGTGTTCATCGTATTGGACAAACT AAGCAAGTAATGATCAAACGATTCATTGTGAAGGGTTCAGTAGAGGAAAGAATGGAGGCA GTCCAAGCTAGGAAGCAACGTATGATTTCTGGTGCTTTGACTGACCAAGAAGTTCGGACT GCAAGAATCGAGGAACTCAAGATGCTTTTTGCATAG

Peptide Sequence

PEP ID	Solyc11g066790.2.1
PEP Infomation	Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1)
Sequence	MAGIKVTEELVSMVRSIVGDEYTEMDIIRSLHMAKNDPTAAINIIFDTPSFKKIEIRNTH LNSEAGNVSSNSGKIKEAEISTHLNSEAGNVSSNSGKIKEDEISTVSLNEGLDSEREFGD NGLVGKRAGRDMGSECGSNDLVGKRAGCQMGSEWWYVGCGEVAGMSTCKGRIVKPGDEVD FTFPVEKKLSSPSPGKFGGGRGRQAAACSEIVRFSTKACGEIGRIPNEWARCILPLVRDK KIRIEGCCKSVPNILGIMDSVLLSVRVHINSSMFRKSHQTSLKARSNPADDTVIHPLPTL FHLLGLTPFKKAEFTPADLYTRKRPLNEQDSSIGPASILRANLSKSSSSADGNEVDNDES ISDTDLDYIVGLADSSKLQEMEPPSTLQCELRPYQKQALHWMTQLERGRNTDEAATTLHP CWNAYRLKDERELVVYLNAFSGDATTEFPSTLEMARGGILADSMGLGKTIMTISLLLSHS ERGGSSGSQSTSQLSSENGEASNILGHSPTFVKKSAKVSSLDKLLKHKPKLISGGNLIIC PMTLLGQWKAEIEAHAQPGALSVYVYYGQTRSKDAKVLARSDVVLTTYGVLASEFSAENA EDSGGLLSIRWFRVVLDEAHTIKSSKSQISNAAAALIADRRWCLTGTPIQNNLEDIYSLL RFLRVEPWGSWAWWNKLIQKPFEEGDERGLKLVQSILSLIMLRRTKSSTDREGRPILVLP PADIQVIYCELTEAERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHP FLVMSRGDTQEFSDLNKLAKRFLKGGKETGEGKDVPSRAYIQEVVEELRNGEQGECPICL EAFEDAVLTPCAHRLCRECLLASWRSSNSGLCPVCRNTVSRQELITAPSDNRFQVDVEKN WVESSKVSALLSELKRLHSVGSKSIVFSQWTAFLDLLQIPLSRSSIPFVRLDGTLNQQQR EKVIKKFSEEDDISVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRVHRIGQT KQVMIKRFIVKGSVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFA*

Transcript Sequence

Transcript ID	Solyc11g066790.2.1
Transcript Infomation	Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1)
Sequence	CTTTTGTAGGCGGGAACTTGTAATATACCGCATGCATATCTATTTTCATACCCGCCATTT CTAAACCCGTTTAGGGTTTTTCAAATTTTCACTATTTTCTTCAACAAATTCAAAAATTCA AAAATTCAATTGGGGATTTTGGGAATTCACTGTAATTATAGGAGTTTTTTTTTGTCTGTG AGAATTCAGTGTAATGGCGGGGATCAAAGTCACGGAGGAGCTTGTTTCAATGGTGCGTTC AATTGTTGGCGATGAATATACAGAGATGGACATAATTAGATCACTTCACATGGCGAAAAA CGATCCTACAGCTGCAATAAACATCATTTTCGACACCCCGAGTTTTAAGAAAATTGAAAT TCGCAATACCCATTTGAATTCGGAAGCTGGGAATGTTAGTAGTAATAGTGGTAAGATTAA GGAAGCTGAGATTAGTACCCATTTGAATTCGGAAGCTGGGAATGTTAGTAGTAATAGTGG TAAGATCAAAGAAGATGAGATTAGTACAGTTTCTTTGAATGAAGGATTGGATTCTGAAAG GGAATTTGGGGATAATGGGTTGGTGGGTAAGAGGGCTGGACGTGATATGGGTAGTGAATG TGGGAGTAATGATTTGGTGGGTAAGAGAGCTGGGTGTCAAATGGGGAGTGAATGGTGGTA TGTGGGGTGTGGTGAGGTTGCTGGTATGTCAACCTGTAAAGGGAGGATTGTGAAGCCTGG TGATGAAGTTGATTTTACGTTCCCAGTGGAGAAGAAATTGAGTTCACCTTCACCTGGGAA GTTTGGAGGTGGACGAGGGCGTCAAGCAGCTGCGTGTTCTGAAATTGTAAGGTTTTCTAC AAAGGCTTGTGGAGAGATTGGGCGTATTCCAAATGAATGGGCTCGATGCATTCTGCCGCT GGTGAGGGATAAGAAGATTAGGATTGAAGGGTGTTGCAAATCAGTCCCTAATATATTGGG GATTATGGACTCTGTTCTTTTGTCTGTCAGAGTGCATATTAACAGTTCCATGTTTCGTAA AAGCCATCAGACATCACTAAAGGCTAGAAGCAATCCCGCAGATGACACAGTTATTCACCC CCTTCCCACTTTGTTCCATTTGCTTGGGCTTACTCCTTTCAAGAAGGCAGAATTTACTCC AGCTGATTTATACACAAGGAAGCGACCTTTGAACGAACAGGACAGCTCCATAGGTCCTGC CTCAATATTGCGTGCAAACTTATCCAAAAGCTCCTCATCTGCAGATGGAAATGAAGTTGA CAATGATGAGTCAATTTCTGATACTGATCTTGACTATATTGTTGGTTTAGCTGATAGCTC GAAGCTACAGGAAATGGAACCACCAAGTACGCTCCAGTGCGAACTGCGACCCTATCAGAA GCAGGCACTTCATTGGATGACGCAACTGGAGAGGGGAAGAAACACGGATGAAGCAGCAAC AACTCTGCACCCATGTTGGAATGCTTACCGCCTGAAGGACGAGAGGGAGCTTGTTGTTTA CTTGAATGCATTTTCGGGTGATGCAACCACTGAATTTCCGAGTACCCTTGAGATGGCTAG AGGAGGAATTTTGGCAGATTCCATGGGGCTAGGGAAGACTATAATGACTATATCTCTCCT CCTCAGTCATTCTGAAAGAGGTGGATCATCAGGAAGCCAATCGACAAGTCAGCTGTCCAG TGAAAACGGAGAAGCTAGTAATATCTTAGGTCATTCTCCAACTTTTGTGAAGAAATCAGC AAAAGTCTCTAGTCTTGATAAGCTTCTGAAACACAAGCCGAAACTTATCTCTGGTGGCAA TCTGATTATATGTCCAATGACACTACTAGGTCAATGGAAGGCAGAGATTGAAGCCCATGC ACAACCTGGGGCTCTATCTGTTTATGTTTATTATGGGCAGACAAGATCAAAGGATGCAAA AGTGCTTGCTCGAAGTGATGTCGTGCTAACGACATATGGGGTATTGGCCTCCGAATTTTC TGCTGAGAATGCTGAGGACAGTGGGGGCCTTCTCTCTATTAGATGGTTTAGAGTGGTGCT TGATGAGGCACATACTATCAAATCCTCCAAAAGCCAAATCTCAAATGCTGCCGCTGCTCT TATTGCTGACCGTCGGTGGTGTCTTACTGGTACCCCTATCCAGAACAATCTGGAGGACAT TTACAGTCTACTAAGATTTTTGAGAGTCGAACCATGGGGAAGCTGGGCATGGTGGAACAA GCTTATTCAGAAACCTTTTGAGGAGGGAGATGAGAGGGGGCTAAAGTTGGTTCAATCAAT ATTAAGTCTGATTATGTTGAGAAGAACAAAGTCTAGTACAGATAGGGAAGGAAGACCAAT TTTAGTTCTACCACCAGCAGATATTCAAGTGATATATTGTGAACTTACAGAAGCAGAGCG CGACTTCTATGATGCTTTGTATAAAAGATCCAAGGTGAAGTTTGATCAGTTTGTTGAGCA AGGACGGGTTCTCCACAACTATGCTTCTATATTGGAGTTGCTTTTGCGACTTCGTCAATG CTGTGACCATCCGTTTCTTGTCATGAGTCGAGGTGATACTCAAGAATTCTCTGATCTAAA TAAGCTTGCTAAACGTTTCCTCAAGGGTGGTAAGGAGACTGGAGAAGGCAAGGATGTCCC TTCACGTGCTTATATTCAAGAGGTTGTGGAAGAGTTGCGGAATGGAGAACAGGGTGAATG CCCTATTTGTCTTGAAGCTTTTGAAGATGCGGTGTTGACTCCATGTGCTCATAGGTTATG TCGAGAGTGTCTTTTGGCAAGCTGGCGAAGTTCTAATTCAGGCCTCTGTCCTGTTTGTAG AAACACTGTCAGTAGGCAGGAGCTTATAACAGCACCATCAGACAACCGCTTTCAGGTTGA TGTTGAAAAGAATTGGGTGGAGTCATCAAAAGTATCAGCCTTGTTGTCTGAATTAAAACG TCTTCATTCTGTTGGCTCCAAAAGCATTGTTTTTAGTCAGTGGACTGCCTTCTTAGATCT ACTGCAGATTCCTCTTTCTCGTAGTAGTATTCCATTTGTTCGCCTTGATGGGACGTTAAA CCAACAACAACGTGAGAAAGTAATAAAGAAGTTCTCAGAAGAGGATGACATATCGGTGTT GCTAATGTCATTGAAGGCTGGTGGTGTTGGGATAAACCTGACGGCTGCATCTAATGCTTT TGTCATGGATCCTTGGTGGAATCCAGCTGTTGAGGAGCAAGCAGTCATGCGTGTTCATCG TATTGGACAAACTAAGCAAGTAATGATCAAACGATTCATTGTGAAGGGTTCAGTAGAGGA AAGAATGGAGGCAGTCCAAGCTAGGAAGCAACGTATGATTTCTGGTGCTTTGACTGACCA AGAAGTTCGGACTGCAAGAATCGAGGAACTCAAGATGCTTTTTGCATAGAAAATAGACAA CAACTAATTATGCCAAAAATGTTCCCTCTGGCTCCTCAGAATATAGATTACACACAACAT ATCAGATCATTTCATTCTGCTCTGCTGAAACACTGGCTTGTTTTGGAGGCCTCAGGAATC TCGAGTGTTGAAAAGTGATCGTTCCATTGGTTACAACTGATTTAATTTCCGGAGGAAGCT ACAGCTACATTGCTATCAGTGTTCCAATTTTTCACTGAAGCAGATTCCAGAAGCGCGAAT GTAACTGGCATTCGGGGTTTGTGTATTTCTACTTCACTGTTCTAAACATTGCTATCAGTG TTCCAGTTTTGATAGCTTAAACAAATTTGTAAGTAATGATCATAATTTTGTCAATGTAGC TATGCAAGCTGCAGAGAGTCATAGTAAATCTATAAGCTTTTTCCAATCAACAAAACTTGT ATGCATATTATTTGTAACTTAAATTTTGAAGTGTAATATGATTATAAATTCCCTATAAAT AATAGATCCACCCCTATTTCTATACGGGGACTGAATGTATGTTGTTTCAGTATATATAAA AATCATCAAACATTTGCGAACAATTGATATGTTTTAGCATCAAGACTAATTTGTCTAACA GCAGCAACTGCAGCTATGACTCCTAAGACTGAGAAAAACACTGCTATTGACATGTTAAGC CAATAAATTGGATTCTTCTTTGATGGTTTGAATGTCAAATTGAAGAAAATCACAGGCAAC ACAAAATCAAGAGGCAAGAAACCAAATGCTCCGATTACTGCATTGATGTCTCCGAAAAAT GGAAGCATTGCTGCAATTGTAGTCGATATGATGACTGAAATTGATCGAGATATTAGACGT GGAATCACATTTCGAGTTGAAAATTCACTGCTCTTAGCATCTGCAAATGTCCTTTCGAGT ACTTCGTTTGTTGGTTGTAAGTATACCTGCAAAATACACACCAGTTAGTCGTAATACTGC TAGTGTATAGTGAATGTATAATGTATTCATACGGATTATAAGCTTATATATGTCGATAGT GTAAATAGTTTATGCAAGTTTGTATAATATAACCTATTGTAGTAGATTGTTTTGAAAAAT TAATTTCATTTGTTAAAAAAAATGAATTTTGAATCTGACTCAATTTTAAAAAGCTAGTTC ATGAGGTAAAAATAGACTACGATCATTTAAATAGAGAATAATGTTTTTGCTCAACAAACA TTCATATGTATAGCTCTTGGACAAACA