Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g066560.3.1
CDS Infomation	Vacuolar protein sorting-associated protein 41 homolog (AHRD V1 ***- B5X3G5_SALSA)
Sequence	ATGTCACGAAAGTTATCGGATAAAGGAATCGACGGCGACGACGAGAGGGACGAAGAAGAA GAATATTCCGATGAAGAAGAAGAGGACGGAGAAGAAGATGAATATGAACCAAGGCTCAAG TATCAGAGGATGGGAGGCAGTGTGCAATCGCTTCTTTCAAGCGATGCTGCTACGTGTATT TCCGTCGCGGAGAGAATGATTGCCCTTGGTACATACAGTGGAGCCGTTCACATTTTAGAT TTTCTCGGCAATCAGGTTAAAGAGTTTGCTGCTCACACTGCTGCAGTCAACGATCTTTGC TTTGACACAGAAGGTGAATACATTGGAAGCTGTTCTGATGATGGGTCTGTCATAATAAAT AGTCTTTTTACTAATGAGAGTATGAAATTCGAGTATCATCGTCCAATGAAGGCTGTTGCT TTAGACCCAGATTATGCAAGAAAGTCTTCCAGAAGATTTGTGACCGGTGGTTTAGCTGGT AATTTGTATCTTAATGCGAAGAAGTGGATGGGCTATCGGGACCAGGTTCTGCACTCTGGT GAAGGTCCAGTTCATGCAGTGAAGTGGCGGACTAGTCTCATTGCCTGGGCAAATGATGCA GGAGTTAAAGTTTATGATGCTGCCAATGATCAGCGCATAACTTTCATTGAACGACCTCGT GGAAGCCCACACCCTGAACTTCTTGTCCCTCATATAGTTTGGCAGGATGACACTGTTTTG GTCGTTGGATGGGGAACCTCGGTGAAAATTGCATCGATAAAAACAAACCAGAACAAAGGC TTGAATGGGTCATACAAGTATATAACCATGTCTAGTCTGAATCAGGTGGATATTGTGGCA TCCTTTCAAACCAGCTATTTCATTTCAGGAATTGCTCCTTTTGGTGATTCTTTGGTTGTT CTAGCTTATATTCCTGCTGAAGAAGATGGAGAGAAGAACTTTAGCAGCACTATTCCCTCC AGACAGGGAAATGCTCAAAGACCAGAAGTTCGTGTTGTGACATGGAATAATGATGAGCTC GCTACCGATGCTCTCCCTGTACATGGCTTTGAGCATTACAAGGCGAAAGATTATTCGCTT GCTCATGCTCCATTTTCAGGTAGCAGCTATGCAGGGGGTCAGTGGGCTGCTGGTGATGAA CCCTTATACTACATTGTGTCCCCAAAAGATGTGATTATTGCGAAGCCAAGGGACACAGAA GATCATATTAATTGGCTTCTCCAGCATGGATGGCATGAGAAAGCTTTAGAAGCAGTTGAG GCCAATCAGGGAAGGAGTGAGCTCGTTGATGAGGTGGGTTCGAGATACCTCGATCATCTG ATTGTGGAAAGGAAGTATGGTGAAGCGGCATCTCTATGTCCAAAATTGTTGCGAGGATCA CCTTCCGCATGGGAAAGATGGGTTTTCCATTTTGCACATCTGCGCCAACTGCCTGTGTTG GTCCCGTACATCCCAACAGAAAATCCAATATTGCGTGATACAGCTTATGAGGTAGCTCTT GTTGCTTTGGCAACAAATCCATCTTTTTACAAGGATCTCGTATCAACTGTCAAATCCTGG CCACCTGGCATTTATTCTACATCGCCTGTTATCTCAGCTATAGAATCTCAGCTTAATACC TCATCTATGACTGATCACCTCAAAGAGGCTCTAGCAGAATTATATGTGATTGAGGGACAA CATGATAAAGCTTTTGCTCTTTATGCGGATCTTATGAAGCCGGATCTGTTTGACTTCATT GAAAAGCATAATTTGCATGATGCTGTGCGTGAAAAGGTTGTCCAACTAATGATGGTTGAC AGCAAGCGTGCTATACCTTTGTTGATCCAGCATAGGGACTTTATATATCCACCCGAAGTG GTGTCACAACTTATGGCTGCAAAGACTAAGTGTGATTGTCGGTACCTTTTGCATTTGTAT CTTCATTCACTATTTGAAGTGAATCCTCATGCTGGACGGGATTACCATGACATGCAGGTC GAGCTTTATGCTGACTATGATCCAAAGATGATGCTTCCCTTTCTCAGAAGTAGTCAGCAT TATACACTTGAGAAGGCTTATGATATCTGCGTGAAGAGGGATTTATTAAAGGAACAAGTT TTCATCCTTGGAAGAATGGGGAATGCAAAGCAGGCCCTTGCTATTATCATAAATAGAGTG GGAGATATAGAAGAGGCCATCGAATTTGTAAGCATGCAACATGATGATGAACTCTGGGAT GAGCTGATTAAGCAGAGTCTTAATAAGCCTGAAATGGTTGGTGTATTGTTGGAGCATACT GTAGGGAATCTTGATCCACTTTATATTGTAAATATGTTGCCCAATGGCTTGGAAATACCT CGTCTGAGAGATCGTTTGGTCAAAATTGTCACTGATTACAGAACAGAAACTTCTCTTAGA CATGGATGTAATGACATACTCAAGGCTGATTGTGTCAACCTGCTAGTCAAATACTACAAG GAAGCAAAGCGTGCAATATGTTTGAGTGAGGACGTTGATCAAGCACATTCCAAAAGAAAT CAGCAGAGGGCTTCACATTTAGGAGAGAGAGTCATTAGTATGAAATCCATGGAGGTTAAG TCAAAAACCAGAGGAGGTGGAAGGTGTTGCATATGTTTTGATCCGTTTTCTCTACAGAAC GTATCAATTATTGCCTTCTTTTGTTGTCATGCCTACCATACAACTTGTCTCATGGAGTCC ACCATTTCCATTGGTGGCGATAAAAAAGAGGCTGGGGCTTCTTCCAAGGGCACTGCGTCA TATTTTGAATTTGATAATGGCAGTGATGACGATGATGAAGAAGAAGATGACGAAGATGCT TCTTCAGGTACCCCTCGGATGCGTTGTATTTTGTGTACTACAGCTGCAGGTTGA

Peptide Sequence

PEP ID	Solyc11g066560.3.1
PEP Infomation	Vacuolar protein sorting-associated protein 41 homolog (AHRD V1 ***- B5X3G5_SALSA)
Sequence	MSRKLSDKGIDGDDERDEEEEYSDEEEEDGEEDEYEPRLKYQRMGGSVQSLLSSDAATCI SVAERMIALGTYSGAVHILDFLGNQVKEFAAHTAAVNDLCFDTEGEYIGSCSDDGSVIIN SLFTNESMKFEYHRPMKAVALDPDYARKSSRRFVTGGLAGNLYLNAKKWMGYRDQVLHSG EGPVHAVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPHPELLVPHIVWQDDTVL VVGWGTSVKIASIKTNQNKGLNGSYKYITMSSLNQVDIVASFQTSYFISGIAPFGDSLVV LAYIPAEEDGEKNFSSTIPSRQGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAKDYSL AHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVIIAKPRDTEDHINWLLQHGWHEKALEAVE ANQGRSELVDEVGSRYLDHLIVERKYGEAASLCPKLLRGSPSAWERWVFHFAHLRQLPVL VPYIPTENPILRDTAYEVALVALATNPSFYKDLVSTVKSWPPGIYSTSPVISAIESQLNT SSMTDHLKEALAELYVIEGQHDKAFALYADLMKPDLFDFIEKHNLHDAVREKVVQLMMVD SKRAIPLLIQHRDFIYPPEVVSQLMAAKTKCDCRYLLHLYLHSLFEVNPHAGRDYHDMQV ELYADYDPKMMLPFLRSSQHYTLEKAYDICVKRDLLKEQVFILGRMGNAKQALAIIINRV GDIEEAIEFVSMQHDDELWDELIKQSLNKPEMVGVLLEHTVGNLDPLYIVNMLPNGLEIP RLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYKEAKRAICLSEDVDQAHSKRN QQRASHLGERVISMKSMEVKSKTRGGGRCCICFDPFSLQNVSIIAFFCCHAYHTTCLMES TISIGGDKKEAGASSKGTASYFEFDNGSDDDDEEEDDEDASSGTPRMRCILCTTAAG*

Transcript Sequence

Transcript ID	Solyc11g066560.3.1
Transcript Infomation	Vacuolar protein sorting-associated protein 41 homolog (AHRD V1 ***- B5X3G5_SALSA)
Sequence	CTTTTATTTGTTTTAGTGAAAATGTTTACTTAATCAACTGTTTAACGGGCAAACCCCCAA AAGGTTCTATTTATTTCTCTCTCTTTAAACGCCCCACGAAAAAAGAAAAGCACCGAAACT CCAAAAAAGGTACTCCCCTTTACAGATCTCCACTCGGCAATCGCTGTATAATTCCTCCGG CGAACGGAGTTCCGGGATGTCACGAAAGTTATCGGATAAAGGAATCGACGGCGACGACGA GAGGGACGAAGAAGAAGAATATTCCGATGAAGAAGAAGAGGACGGAGAAGAAGATGAATA TGAACCAAGGCTCAAGTATCAGAGGATGGGAGGCAGTGTGCAATCGCTTCTTTCAAGCGA TGCTGCTACGTGTATTTCCGTCGCGGAGAGAATGATTGCCCTTGGTACATACAGTGGAGC CGTTCACATTTTAGATTTTCTCGGCAATCAGGTTAAAGAGTTTGCTGCTCACACTGCTGC AGTCAACGATCTTTGCTTTGACACAGAAGGTGAATACATTGGAAGCTGTTCTGATGATGG GTCTGTCATAATAAATAGTCTTTTTACTAATGAGAGTATGAAATTCGAGTATCATCGTCC AATGAAGGCTGTTGCTTTAGACCCAGATTATGCAAGAAAGTCTTCCAGAAGATTTGTGAC CGGTGGTTTAGCTGGTAATTTGTATCTTAATGCGAAGAAGTGGATGGGCTATCGGGACCA GGTTCTGCACTCTGGTGAAGGTCCAGTTCATGCAGTGAAGTGGCGGACTAGTCTCATTGC CTGGGCAAATGATGCAGGAGTTAAAGTTTATGATGCTGCCAATGATCAGCGCATAACTTT CATTGAACGACCTCGTGGAAGCCCACACCCTGAACTTCTTGTCCCTCATATAGTTTGGCA GGATGACACTGTTTTGGTCGTTGGATGGGGAACCTCGGTGAAAATTGCATCGATAAAAAC AAACCAGAACAAAGGCTTGAATGGGTCATACAAGTATATAACCATGTCTAGTCTGAATCA GGTGGATATTGTGGCATCCTTTCAAACCAGCTATTTCATTTCAGGAATTGCTCCTTTTGG TGATTCTTTGGTTGTTCTAGCTTATATTCCTGCTGAAGAAGATGGAGAGAAGAACTTTAG CAGCACTATTCCCTCCAGACAGGGAAATGCTCAAAGACCAGAAGTTCGTGTTGTGACATG GAATAATGATGAGCTCGCTACCGATGCTCTCCCTGTACATGGCTTTGAGCATTACAAGGC GAAAGATTATTCGCTTGCTCATGCTCCATTTTCAGGTAGCAGCTATGCAGGGGGTCAGTG GGCTGCTGGTGATGAACCCTTATACTACATTGTGTCCCCAAAAGATGTGATTATTGCGAA GCCAAGGGACACAGAAGATCATATTAATTGGCTTCTCCAGCATGGATGGCATGAGAAAGC TTTAGAAGCAGTTGAGGCCAATCAGGGAAGGAGTGAGCTCGTTGATGAGGTGGGTTCGAG ATACCTCGATCATCTGATTGTGGAAAGGAAGTATGGTGAAGCGGCATCTCTATGTCCAAA ATTGTTGCGAGGATCACCTTCCGCATGGGAAAGATGGGTTTTCCATTTTGCACATCTGCG CCAACTGCCTGTGTTGGTCCCGTACATCCCAACAGAAAATCCAATATTGCGTGATACAGC TTATGAGGTAGCTCTTGTTGCTTTGGCAACAAATCCATCTTTTTACAAGGATCTCGTATC AACTGTCAAATCCTGGCCACCTGGCATTTATTCTACATCGCCTGTTATCTCAGCTATAGA ATCTCAGCTTAATACCTCATCTATGACTGATCACCTCAAAGAGGCTCTAGCAGAATTATA TGTGATTGAGGGACAACATGATAAAGCTTTTGCTCTTTATGCGGATCTTATGAAGCCGGA TCTGTTTGACTTCATTGAAAAGCATAATTTGCATGATGCTGTGCGTGAAAAGGTTGTCCA ACTAATGATGGTTGACAGCAAGCGTGCTATACCTTTGTTGATCCAGCATAGGGACTTTAT ATATCCACCCGAAGTGGTGTCACAACTTATGGCTGCAAAGACTAAGTGTGATTGTCGGTA CCTTTTGCATTTGTATCTTCATTCACTATTTGAAGTGAATCCTCATGCTGGACGGGATTA CCATGACATGCAGGTCGAGCTTTATGCTGACTATGATCCAAAGATGATGCTTCCCTTTCT CAGAAGTAGTCAGCATTATACACTTGAGAAGGCTTATGATATCTGCGTGAAGAGGGATTT ATTAAAGGAACAAGTTTTCATCCTTGGAAGAATGGGGAATGCAAAGCAGGCCCTTGCTAT TATCATAAATAGAGTGGGAGATATAGAAGAGGCCATCGAATTTGTAAGCATGCAACATGA TGATGAACTCTGGGATGAGCTGATTAAGCAGAGTCTTAATAAGCCTGAAATGGTTGGTGT ATTGTTGGAGCATACTGTAGGGAATCTTGATCCACTTTATATTGTAAATATGTTGCCCAA TGGCTTGGAAATACCTCGTCTGAGAGATCGTTTGGTCAAAATTGTCACTGATTACAGAAC AGAAACTTCTCTTAGACATGGATGTAATGACATACTCAAGGCTGATTGTGTCAACCTGCT AGTCAAATACTACAAGGAAGCAAAGCGTGCAATATGTTTGAGTGAGGACGTTGATCAAGC ACATTCCAAAAGAAATCAGCAGAGGGCTTCACATTTAGGAGAGAGAGTCATTAGTATGAA ATCCATGGAGGTTAAGTCAAAAACCAGAGGAGGTGGAAGGTGTTGCATATGTTTTGATCC GTTTTCTCTACAGAACGTATCAATTATTGCCTTCTTTTGTTGTCATGCCTACCATACAAC TTGTCTCATGGAGTCCACCATTTCCATTGGTGGCGATAAAAAAGAGGCTGGGGCTTCTTC CAAGGGCACTGCGTCATATTTTGAATTTGATAATGGCAGTGATGACGATGATGAAGAAGA AGATGACGAAGATGCTTCTTCAGGTACCCCTCGGATGCGTTGTATTTTGTGTACTACAGC TGCAGGTTGACTATCTGTTTTTTTTTTTGCTTGTTTGGGTGTACCATAGTTTTGTTTGGT GTGTGCATATATCATGAGCATGTGTTATTATTATTTATTAGATAGAGACTGCTTTCTAAT GTTCTATATCTGTATTTTAGGAATTTGTACTGTATTTATTGATTGAGTCGAATTCTCTGC TATCCCTTTCAATTATTAGGGACGGCTTAACACATAAAATTCTCCAGATTATTTGTATGG TGCTGTTCTTTTTGGAACAGACTTTGTGGGTTT