Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g066510.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1)
Sequence

ATGAAAAGAATATTGTTACAGTACTCAAACCCAGAAATTTTACATTATTCAATGAGTTCA
TCAGATCCAACAATTACTTATCAACCTATGAACGATTCCGTAGCTACAGCAATTGGAAGA
CCGTTTAAGCTAACTGCACCTTTCGATTCATCAATGGCGTTAACGATACTCGTTCTTCTC
ACTGCTCTGTTTTTCATGGGTTTTTTCTCTATTTATATACGTCACTTCGCCGGAGATATA
ACAACTTCCGCCGGTTCCGATGAGGATCGACGCCGGAGAAATCTATCCCTATCGTCGTCT
TCTACCTTCGCGCACAGGTCTTGCCGGAAAGGGATGGATCCATCAACGGTGCAATCTCTA
CCGTTAATTTCATACGGTGGAGCCGCGAAGCACTTGATCGAAGACTGCCCAATTTGTTTA
TCAGAGTTCGAGGTGAGTGAACTCGTTCGTCTTATTCCGTACTGTCGTCACGTGTTTCAT
CAACAGTGCCTTGACACGTGGCTATCATCGCACGTGACTTGTCCACTTTGTCGATCAACA
CAATTTTTCAAGGATGAGGTTTGTTTGGATATAGTTGATGTAAGAGATGAAAATGTTGTG
AGTGAGAGATCAACGGTTCAACAGTGTGACACGTGTAGGTGTATTAGAAGATCATGTAGT
TCATCAAATTTGGGGAGTAGAGTGACATTGCATAGAAGTGCAAGTTTCTAA

Peptide Sequence

PEP ID

Solyc11g066510.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1)
Sequence

MKRILLQYSNPEILHYSMSSSDPTITYQPMNDSVATAIGRPFKLTAPFDSSMALTILVLL
TALFFMGFFSIYIRHFAGDITTSAGSDEDRRRRNLSLSSSSTFAHRSCRKGMDPSTVQSL
PLISYGGAAKHLIEDCPICLSEFEVSELVRLIPYCRHVFHQQCLDTWLSSHVTCPLCRST
QFFKDEVCLDIVDVRDENVVSERSTVQQCDTCRCIRRSCSSSNLGSRVTLHRSASF*

Transcript Sequence

Transcript ID

Solyc11g066510.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1)
Sequence

CCTCTTCACTACTCTTTCACTCTTTCTCCCCCAAAAAAAAACTCCATTTCTACCATCTTC
TACTACTATACATTATACACCAAAAAATAAAAATCACTATTTATTTGATCTAATTTTTTT
TTTTAGTGTTAGTTGTTGAGATGAAAAGAATATTGTTACAGTACTCAAACCCAGAAATTT
TACATTATTCAATGAGTTCATCAGATCCAACAATTACTTATCAACCTATGAACGATTCCG
TAGCTACAGCAATTGGAAGACCGTTTAAGCTAACTGCACCTTTCGATTCATCAATGGCGT
TAACGATACTCGTTCTTCTCACTGCTCTGTTTTTCATGGGTTTTTTCTCTATTTATATAC
GTCACTTCGCCGGAGATATAACAACTTCCGCCGGTTCCGATGAGGATCGACGCCGGAGAA
ATCTATCCCTATCGTCGTCTTCTACCTTCGCGCACAGGTCTTGCCGGAAAGGGATGGATC
CATCAACGGTGCAATCTCTACCGTTAATTTCATACGGTGGAGCCGCGAAGCACTTGATCG
AAGACTGCCCAATTTGTTTATCAGAGTTCGAGGTGAGTGAACTCGTTCGTCTTATTCCGT
ACTGTCGTCACGTGTTTCATCAACAGTGCCTTGACACGTGGCTATCATCGCACGTGACTT
GTCCACTTTGTCGATCAACACAATTTTTCAAGGATGAGGTTTGTTTGGATATAGTTGATG
TAAGAGATGAAAATGTTGTGAGTGAGAGATCAACGGTTCAACAGTGTGACACGTGTAGGT
GTATTAGAAGATCATGTAGTTCATCAAATTTGGGGAGTAGAGTGACATTGCATAGAAGTG
CAAGTTTCTAAAAATAAAAAATTGTAAAAAGATTTTGTTAAGTATTAACTACTTCTGTAG
ATCAATCATATTGTAAAGATTAATTATTGTGATGTGAAGTATAAATATTGTATGTTCATT
CATATTTTTTGAGTTATTGTTATGA