Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g066420.1.1
CDS Infomation	LOW QUALITY:Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (AHRD V3.3 *** A0A151SAJ5_CAJCA)
Sequence	ATGATTCAAGGTACAAGTAGTAGTGCTAATAATCCACAAAACATACCATTATATTCATCA AATCATCATCCTAATAATAATATTCAAGAAGATATATTTTCTTCTTCTTCTTCTTCTTAT CAACAAAATTCATTTTTATTCAACTTATCTCTTCTCAAAGAGAAGGTTCATCAAGTTCAA TCACTTGCCACCATGTTCATTACTCCGGATAATCAAACGATTATTCACCCTCCTCCTGAG TCAATATCTATGATCATCGCGAATATGGGAACTTTGATCCAAGAAATCATCACAACTTCT TCTTCCCTCATGTTTTCTTGCCAAAAGATTGTCCTCGACTCTACCTCACTCAGTCAAAAT TCAAGTAGATATCGCGAACCATCTCAAAATGATGTTGGTCATGGTCAAGGTCAAGGTCAA GTTGATCATTTGCTACAAGATTATGATTGGTATGTGGATAATTACAATTCTAATTGTAAC ACACATGAAGATAACAAAAACCATGTTACTAGTAGTAGTACTATTATAGCTAGTAGTACT ATTAGTCATGATAATTACTATAGTAAAGAATTTGGAAAAAAGGAATTATTATTGAGTACT TCAAAAGGTAAAGTTGTGAATGAAGAAAATAATTATGATATTGTTGAGTTAGATGCATCT GATTTATTGGCAAAGTATACACACTATTGTCAAATTTGTGGTAAAGGGTTTAAAAGAGAT GCAAATTTGAGAATGCATATGAGGGCTCATGGAGATGAATATAAATCTAGTGCTGCATTG AGTAATCCTATGAAGAGAATCAACGATTTAACGAGTGATGGATCGTTGAAATCAAGTAGT AACACGATTAAATATTCGTGTCCTCAAGAAGGTTGTAGGTGGAACAAGAAGCACGCGAAG TTTCAACCATTGAAATCAATGGTGTGTGTGAAGAATCATTACAAGAGAAGCCATTGTCCT AAAATGTATGTGTGTAAGAGATGCAACAAGAAGAGTTTCTCTGTTTTGTCTGATCTTAGA ACTCATGAGAAACATTGTGGTGATTTGAAATGGCAATGTTCATGTGGTACTACTTTTTCA AGAAAAGATAAGCTTATGGGGCATGTATCTTTATTTGTTGGACACACTCCACTTATAAAA CAAAGTGCAAGATAG

Peptide Sequence

PEP ID	Solyc11g066420.1.1
PEP Infomation	LOW QUALITY:Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (AHRD V3.3 *** A0A151SAJ5_CAJCA)
Sequence	MIQGTSSSANNPQNIPLYSSNHHPNNNIQEDIFSSSSSSYQQNSFLFNLSLLKEKVHQVQ SLATMFITPDNQTIIHPPPESISMIIANMGTLIQEIITTSSSLMFSCQKIVLDSTSLSQN SSRYREPSQNDVGHGQGQGQVDHLLQDYDWYVDNYNSNCNTHEDNKNHVTSSSTIIASST ISHDNYYSKEFGKKELLLSTSKGKVVNEENNYDIVELDASDLLAKYTHYCQICGKGFKRD ANLRMHMRAHGDEYKSSAALSNPMKRINDLTSDGSLKSSSNTIKYSCPQEGCRWNKKHAK FQPLKSMVCVKNHYKRSHCPKMYVCKRCNKKSFSVLSDLRTHEKHCGDLKWQCSCGTTFS RKDKLMGHVSLFVGHTPLIKQSAR*

Transcript Sequence

Transcript ID	Solyc11g066420.1.1
Transcript Infomation	LOW QUALITY:Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (AHRD V3.3 *** A0A151SAJ5_CAJCA)
Sequence	ATGATTCAAGGTACAAGTAGTAGTGCTAATAATCCACAAAACATACCATTATATTCATCA AATCATCATCCTAATAATAATATTCAAGAAGATATATTTTCTTCTTCTTCTTCTTCTTAT CAACAAAATTCATTTTTATTCAACTTATCTCTTCTCAAAGAGAAGGTTCATCAAGTTCAA TCACTTGCCACCATGTTCATTACTCCGGATAATCAAACGATTATTCACCCTCCTCCTGAG TCAATATCTATGATCATCGCGAATATGGGAACTTTGATCCAAGAAATCATCACAACTTCT TCTTCCCTCATGTTTTCTTGCCAAAAGATTGTCCTCGACTCTACCTCACTCAGTCAAAAT TCAAGTAGATATCGCGAACCATCTCAAAATGATGTTGGTCATGGTCAAGGTCAAGGTCAA GTTGATCATTTGCTACAAGATTATGATTGGTATGTGGATAATTACAATTCTAATTGTAAC ACACATGAAGATAACAAAAACCATGTTACTAGTAGTAGTACTATTATAGCTAGTAGTACT ATTAGTCATGATAATTACTATAGTAAAGAATTTGGAAAAAAGGAATTATTATTGAGTACT TCAAAAGGTAAAGTTGTGAATGAAGAAAATAATTATGATATTGTTGAGTTAGATGCATCT GATTTATTGGCAAAGTATACACACTATTGTCAAATTTGTGGTAAAGGGTTTAAAAGAGAT GCAAATTTGAGAATGCATATGAGGGCTCATGGAGATGAATATAAATCTAGTGCTGCATTG AGTAATCCTATGAAGAGAATCAACGATTTAACGAGTGATGGATCGTTGAAATCAAGTAGT AACACGATTAAATATTCGTGTCCTCAAGAAGGTTGTAGGTGGAACAAGAAGCACGCGAAG TTTCAACCATTGAAATCAATGGTGTGTGTGAAGAATCATTACAAGAGAAGCCATTGTCCT AAAATGTATGTGTGTAAGAGATGCAACAAGAAGAGTTTCTCTGTTTTGTCTGATCTTAGA ACTCATGAGAAACATTGTGGTGATTTGAAATGGCAATGTTCATGTGGTACTACTTTTTCA AGAAAAGATAAGCTTATGGGGCATGTATCTTTATTTGTTGGACACACTCCACTTATAAAA CAAAGTGCAAGATAG