Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g066370.2.1
CDS Infomation	DNA ligase (AHRD V3.3 *** K4D9P5_SOLLC)
Sequence	ATGTTGTGTTTGAGTTCATATCGTTTCACTCAAACTACTCTTCTTTACAATTTCTCCGTT AAACCTTCTTCAATCTTTCTTCATTTCTACAAGAAGAAGCAGTTAACTCTCAAACCCCTT TTCTTCTCTGTAAACCCTAATTCAAATTCAAGAACCATGTCTGATTCTCCTCCTGCTCCT CCTCGCTCTGCGTTTGCTGTACTTATGGCAAATTCCAAGAAGAAAACAACCTCCTCCTCA CCTAAGAAACGTAAAACCCCAGATGTTGAAACTTCAAGTAAAAGCCCTGTTGTTAATCAA GATTCAGTTTTGAAGCCAATTAAGGACACCGATTTGGTCAATGAGTCGAAAAGTGAGGAG TTGGAGGTGAAGAAACGGAGTCAAGACTCAACTTTGAAGCCAATTGAGGACACCCATTTG GTCAATGAGTCGAAAAGTGAGGAGTGTGTGGTGAAGAAACGGAAAATGATTAGTCCAGAT GAGAGCATTGTGGAAATAAAGAAAAAAGCTGCGAACTTTGATCCAAGAAAGGCTGTGTAT TGGGGAGATGGTCAGAGAGTGCCGTTCATGTTTGTAGTTAAGGCGTTTGATGCAATTTCA AAGGAGTCAGGGCGGATTGTGATCACTGAAATTGTGACTAATATGTTGAGGACTGTGATT GAGACGACGCCTGAGGATTTGTTGCCTGTTGTGTACCTTGCTGCTAATAAGATTGCAGCT GCACACGATGGGATGGAGCTTGGTATTGGTGATGCTTCCATTATCAAGGCACTTGCTGAA GCCTGTGGTGCTAAAGAAGCACATATCAAGAAGCAATACAAGGAGCTTGGAGATTTGGGC CTTGTTGCAAAAGCAAGTCGTTCATCACAGCCTCTGATGCATAAACCAGAAGCACTGACT GTTGCCAAAGTTTTTGACACATTTCGGATCATTGCCAAGGAATCTGGAAAGGATAGTCAG GAAAAGAAAAAGAATTACATTAAATCACTGCTTGTTGCAGCCACTGATTGTGAACCCCAA TATTTGATTCGTCTTCTCCAGACAAAGCTACGCATTGGTTTGGCTGAACAAACACTGTTA GTCGCAATAGCTCATGCTTTTGTGTACTCAGATAAGCATTCATCACCTCCTGCAGGTGTA GATTCTCCTTTGGAAGAGGCTGCCAAGATTGTTAAGCAAGTGTACTCTGTGATTCCAGTT TATGAAAAAATTATCCCTGCTCTTCTAGCTGATGGTGTTTGGAAGCTTTCAGAAACATGC GGTTTCTCACCTGGTGTTCCTGTTGGACCTATGCTAGCTAAGCCAACCAAAGGAGTATCT GAAATTCTTGATAAGTTTCAGGATATGGAGTTCACATGTGAATACAAGTATGATGGTGAA CGTGCCCAGATACACTACATGGAAGATGGTTCCGTTGAGATATACAGCCGAAATGCAGAA AGAAATACTGGAAAGTTTCCTGACGTTGTTACTGCTATCTCAAGATTGAAGAAATCATCT GCAACTTCATTTGTTCTTGACTGTGAACTGGTTGCATACGACCGTGAGAAACAGAAGATC CTGCCCTTTCAGGTCCTTACTACACGTGCTCGTAAAAATGTTGTCATTAGTGAAATCAAG GTCAACGTGTGCATATATGCTTTTGATATCTTGTATCTTAATGGACAACCACTTCTTCAA GAGCAACTTAATGTTCGCAGAGAGCATCTTTACAAGTCATTTGAAGAAGAACCTGGATAT TTCCAGTTTGCTACAGCTGTAACCTCAAATGATCTTGAGGAAATAACAAAATTTCTTGAA GATGCGGTCAACGGCAGTTGTGAGGGATTGATTATCAAAACACTAACTAAAGATGCTACA TATGAGCCTTCAAAGCGGTCAAATAACTGGCTTAAACTGAAGAAGGACTACATGGAGAGT ATTGGCGACTCACTGGATCTGGTACCAATTGGTGCTTTTCATGGTCGGGGGAAACGTACT GGTGTTTACGGAGCCTTTCTCCTAGCTTGTTATGATAGCAACAACGAGGAGTTTCAGAGC ATCTGTAAAATCGGAACTGGGTTTTCTGAATTACAGCTTGAGGAACGCTCTTCCAGCCTT CGTTCTAAAGTTATTCCTAAACCAAAGTCATATTACAGGTATGGGGAAACCATCAATCCA GATGTTTGGTTTGAACCTACCGAGGTCTGGGAAGTGAAAGCTGCTGATCTTACTATCAGC CCTGTCCACCGTGCTGCCCAAGGTATCGTGGATCCCGCGAAGGGAATTTCATTACGATTT CCACGTCTGAGCCGTGTACGAGAAGACAAGAAGCCTGAGGAGGCCTCATCAGCAGAGATG GTAGCGGATATGTATAACGCTCAGAAGCACAATCAAAAAAACAATCAGGATGACAACGAT GAAGACTAA

Peptide Sequence

PEP ID	Solyc11g066370.2.1
PEP Infomation	DNA ligase (AHRD V3.3 *** K4D9P5_SOLLC)
Sequence	MLCLSSYRFTQTTLLYNFSVKPSSIFLHFYKKKQLTLKPLFFSVNPNSNSRTMSDSPPAP PRSAFAVLMANSKKKTTSSSPKKRKTPDVETSSKSPVVNQDSVLKPIKDTDLVNESKSEE LEVKKRSQDSTLKPIEDTHLVNESKSEECVVKKRKMISPDESIVEIKKKAANFDPRKAVY WGDGQRVPFMFVVKAFDAISKESGRIVITEIVTNMLRTVIETTPEDLLPVVYLAANKIAA AHDGMELGIGDASIIKALAEACGAKEAHIKKQYKELGDLGLVAKASRSSQPLMHKPEALT VAKVFDTFRIIAKESGKDSQEKKKNYIKSLLVAATDCEPQYLIRLLQTKLRIGLAEQTLL VAIAHAFVYSDKHSSPPAGVDSPLEEAAKIVKQVYSVIPVYEKIIPALLADGVWKLSETC GFSPGVPVGPMLAKPTKGVSEILDKFQDMEFTCEYKYDGERAQIHYMEDGSVEIYSRNAE RNTGKFPDVVTAISRLKKSSATSFVLDCELVAYDREKQKILPFQVLTTRARKNVVISEIK VNVCIYAFDILYLNGQPLLQEQLNVRREHLYKSFEEEPGYFQFATAVTSNDLEEITKFLE DAVNGSCEGLIIKTLTKDATYEPSKRSNNWLKLKKDYMESIGDSLDLVPIGAFHGRGKRT GVYGAFLLACYDSNNEEFQSICKIGTGFSELQLEERSSSLRSKVIPKPKSYYRYGETINP DVWFEPTEVWEVKAADLTISPVHRAAQGIVDPAKGISLRFPRLSRVREDKKPEEASSAEM VADMYNAQKHNQKNNQDDNDED*

Transcript Sequence

Transcript ID	Solyc11g066370.2.1
Transcript Infomation	DNA ligase (AHRD V3.3 *** K4D9P5_SOLLC)
Sequence	GTAAGTTAAATTCTTCAAAACATCAATCATATGTATTTATGAGATACATAGATTATCGTC CTCACTTCTTTTCTCATCTCTTATATTTTTAACGAAAATATATTTAGATGTATCGTACTC GATATATTGATAATAAAAATGCATCTCCTTCCTTTCCCGCCACCTCGCTCTTATTTCCTT CCCTTTCTTCCTTTACACATTTTTTTTCTTCTTTCCAAATTGAATGTTGTGTTTGAGTTC ATATCGTTTCACTCAAACTACTCTTCTTTACAATTTCTCCGTTAAACCTTCTTCAATCTT TCTTCATTTCTACAAGAAGAAGCAGTTAACTCTCAAACCCCTTTTCTTCTCTGTAAACCC TAATTCAAATTCAAGAACCATGTCTGATTCTCCTCCTGCTCCTCCTCGCTCTGCGTTTGC TGTACTTATGGCAAATTCCAAGAAGAAAACAACCTCCTCCTCACCTAAGAAACGTAAAAC CCCAGATGTTGAAACTTCAAGTAAAAGCCCTGTTGTTAATCAAGATTCAGTTTTGAAGCC AATTAAGGACACCGATTTGGTCAATGAGTCGAAAAGTGAGGAGTTGGAGGTGAAGAAACG GAGTCAAGACTCAACTTTGAAGCCAATTGAGGACACCCATTTGGTCAATGAGTCGAAAAG TGAGGAGTGTGTGGTGAAGAAACGGAAAATGATTAGTCCAGATGAGAGCATTGTGGAAAT AAAGAAAAAAGCTGCGAACTTTGATCCAAGAAAGGCTGTGTATTGGGGAGATGGTCAGAG AGTGCCGTTCATGTTTGTAGTTAAGGCGTTTGATGCAATTTCAAAGGAGTCAGGGCGGAT TGTGATCACTGAAATTGTGACTAATATGTTGAGGACTGTGATTGAGACGACGCCTGAGGA TTTGTTGCCTGTTGTGTACCTTGCTGCTAATAAGATTGCAGCTGCACACGATGGGATGGA GCTTGGTATTGGTGATGCTTCCATTATCAAGGCACTTGCTGAAGCCTGTGGTGCTAAAGA AGCACATATCAAGAAGCAATACAAGGAGCTTGGAGATTTGGGCCTTGTTGCAAAAGCAAG TCGTTCATCACAGCCTCTGATGCATAAACCAGAAGCACTGACTGTTGCCAAAGTTTTTGA CACATTTCGGATCATTGCCAAGGAATCTGGAAAGGATAGTCAGGAAAAGAAAAAGAATTA CATTAAATCACTGCTTGTTGCAGCCACTGATTGTGAACCCCAATATTTGATTCGTCTTCT CCAGACAAAGCTACGCATTGGTTTGGCTGAACAAACACTGTTAGTCGCAATAGCTCATGC TTTTGTGTACTCAGATAAGCATTCATCACCTCCTGCAGGTGTAGATTCTCCTTTGGAAGA GGCTGCCAAGATTGTTAAGCAAGTGTACTCTGTGATTCCAGTTTATGAAAAAATTATCCC TGCTCTTCTAGCTGATGGTGTTTGGAAGCTTTCAGAAACATGCGGTTTCTCACCTGGTGT TCCTGTTGGACCTATGCTAGCTAAGCCAACCAAAGGAGTATCTGAAATTCTTGATAAGTT TCAGGATATGGAGTTCACATGTGAATACAAGTATGATGGTGAACGTGCCCAGATACACTA CATGGAAGATGGTTCCGTTGAGATATACAGCCGAAATGCAGAAAGAAATACTGGAAAGTT TCCTGACGTTGTTACTGCTATCTCAAGATTGAAGAAATCATCTGCAACTTCATTTGTTCT TGACTGTGAACTGGTTGCATACGACCGTGAGAAACAGAAGATCCTGCCCTTTCAGGTCCT TACTACACGTGCTCGTAAAAATGTTGTCATTAGTGAAATCAAGGTCAACGTGTGCATATA TGCTTTTGATATCTTGTATCTTAATGGACAACCACTTCTTCAAGAGCAACTTAATGTTCG CAGAGAGCATCTTTACAAGTCATTTGAAGAAGAACCTGGATATTTCCAGTTTGCTACAGC TGTAACCTCAAATGATCTTGAGGAAATAACAAAATTTCTTGAAGATGCGGTCAACGGCAG TTGTGAGGGATTGATTATCAAAACACTAACTAAAGATGCTACATATGAGCCTTCAAAGCG GTCAAATAACTGGCTTAAACTGAAGAAGGACTACATGGAGAGTATTGGCGACTCACTGGA TCTGGTACCAATTGGTGCTTTTCATGGTCGGGGGAAACGTACTGGTGTTTACGGAGCCTT TCTCCTAGCTTGTTATGATAGCAACAACGAGGAGTTTCAGAGCATCTGTAAAATCGGAAC TGGGTTTTCTGAATTACAGCTTGAGGAACGCTCTTCCAGCCTTCGTTCTAAAGTTATTCC TAAACCAAAGTCATATTACAGGTATGGGGAAACCATCAATCCAGATGTTTGGTTTGAACC TACCGAGGTCTGGGAAGTGAAAGCTGCTGATCTTACTATCAGCCCTGTCCACCGTGCTGC CCAAGGTATCGTGGATCCCGCGAAGGGAATTTCATTACGATTTCCACGTCTGAGCCGTGT ACGAGAAGACAAGAAGCCTGAGGAGGCCTCATCAGCAGAGATGGTAGCGGATATGTATAA CGCTCAGAAGCACAATCAAAAAAACAATCAGGATGACAACGATGAAGACTAATCAAAGAG CACTTGCGCATCTAAAAGTGATCAGGAAGGCAAGGGAACGAAGACAACTAATCAAAGATC GCTTCGTCTAAAAATGATCAGGATGACGATGAAGAAGACTACTCAAAGAAAGTGTCACGT CTAAAAAAATGATCAAACATCGCGTTCACATCTCTTATCTGAATGAATGATCATGTCCAT TGTACAACAGACTACAGATTGATGTCCTTGGCAGATGTAAGTTGCCTCAAACCAATTTTG TGAAAGTTGATCTATTAGTCAATGTGTCTACAGTTGTTGTATGTATGATTTGATCAGTTT AAAAGAAAATTTTCAAGCG