Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g066300.2.1
CDS Infomation

CRS2-associated factor 1 (AHRD V3.3 *** A0A072TTL7_MEDTR)
Sequence

AAATACCCGAAGAAGAAAAACCCCAATTCCTCAAAACCGGAAAAAGACCCGGTTCCAGCT
TTCAAAACCCACCATCACAACTCCAAATACCACAAACCGGTTAAACCGGGTCAAGTAATC
ACCGAAGACGGCGACCGTTCCGTCGTCGTTAAAGATTCCGGCGTTTCATATCGTCTCCCT
GGTGCCCCTTTTGATTTCCAGTTCAGTTACTCTGAAACTCCGAAAGCAAAACCGTTGGCT
ATTCGTGAACCGGCTTTTTTACCTTTTGCTCCTCCGACTATGCCTAGACCGTGGACAGGG
AAAGCACCCATGAAGAAAGCTAAGAGAAATATTAAGCTTTTTGAGCCATTGTATCCTCAA
ATGCAGAGTGATGATGATGGGGGTAAGCGCTATGAAATGTTGAGGGCGTATGAGCTGGGG
GTGTTTGAAGGAAAGCCAAAGAAGGTGTTGGGTGCTCCATTGACAAAGATGGAAATTCAA
GAGCTTTTGAAACATTGTATAGCTAGTAATCGACAGGTTAACATTGGTCGGGATGGATTG
GTACATAACATGTTAGAGTTAATACATACTCACTGGAGGAGGAATCCTGTTTGTAAAGTT
CGATGCTTAGGAGTCCCTACTGTTGATATGAACAACCTATGCCAATGTCTCGAGGAGAAG
ACTGGCGGAAAGATCATACATAGAGTGGGTGGTGTAGTTTATCTCTTTCGGGGAAGGTAC
TATGACCAGCATACACGTCCAAAGTACCCACTGATGTTATGGAAACCAGCTACACCAGTT
TACCCAAAACTTATACAGGAAGCACCAGAAGGACTGACCAAAGAAGAGGCTGATGAGTTA
CGAATCAAGGGAAAGAAGCTACCCCCTATCTGTAAATTGGCGAAAAACGGAGTCTACCTT
ACGCTAGTGAGAGACGTGAGAAGTGCCTTTGAAGCTTGTCCATTGGTGAAGATTGATTGC
CGGGGTATGCATGCAAGTGATTATAAGAAGCTAGGAGCTAAGTTAAAGGAATTGGTTCCT
TGTGTGCTATTGTCATTCGATGATGAACAGATATTGATGTGGAGAGGAAAAGACTGGAAA
CCTATGTACGGAAATGGCCCTTCGGCTGTGTCCTCCAGAATTGATGCTGTTGCAGATGAA
ATAAATACTTCAGGACGCTCAGGTATGCATGAAATACTGGCAAATCCAGGAGGCACTGCC
AAAGATTATTCCAACACACACTTGAGAACACGGCGCACAAGCCCTAAAATGATGTCCCTG
TGGAAGAATGCTATTGATTCAGGCAAGGCATTATTGCTAGACGACATTGATCTAAAACCT
GATGATCTCTTGAACAAGGTGGAGGAATTCGCTAGCATTTCACAGGCCATAGAGCACACA
TATCCTGCTCTGGTTTTATCCAGTAAACGCGTCCCTGAACAGTCAGGATCGATGTGGAGA
GGCAGTTCCGATGATGACAATGACAGCGACGATGAGATCAGTGATGGTGATCATGAAGAT
AAATATTACATTAACACCTCATTTGAAGCATTAGAGTCAACAGTTCCTAAAGGATTATTA
CCAGTTGACTTAATAGTAAAGGAGTTCAGTGATGATGAGTAA

Peptide Sequence

PEP ID

Solyc11g066300.2.1
PEP Infomation

CRS2-associated factor 1 (AHRD V3.3 *** A0A072TTL7_MEDTR)
Sequence

KYPKKKNPNSSKPEKDPVPAFKTHHHNSKYHKPVKPGQVITEDGDRSVVVKDSGVSYRLP
GAPFDFQFSYSETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPMKKAKRNIKLFEPLYPQ
MQSDDDGGKRYEMLRAYELGVFEGKPKKVLGAPLTKMEIQELLKHCIASNRQVNIGRDGL
VHNMLELIHTHWRRNPVCKVRCLGVPTVDMNNLCQCLEEKTGGKIIHRVGGVVYLFRGRY
YDQHTRPKYPLMLWKPATPVYPKLIQEAPEGLTKEEADELRIKGKKLPPICKLAKNGVYL
TLVRDVRSAFEACPLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWK
PMYGNGPSAVSSRIDAVADEINTSGRSGMHEILANPGGTAKDYSNTHLRTRRTSPKMMSL
WKNAIDSGKALLLDDIDLKPDDLLNKVEEFASISQAIEHTYPALVLSSKRVPEQSGSMWR
GSSDDDNDSDDEISDGDHEDKYYINTSFEALESTVPKGLLPVDLIVKEFSDDE*

Transcript Sequence

Transcript ID

Solyc11g066300.2.1
Transcript Infomation

CRS2-associated factor 1 (AHRD V3.3 *** A0A072TTL7_MEDTR)
Sequence

AAATACCCGAAGAAGAAAAACCCCAATTCCTCAAAACCGGAAAAAGACCCGGTTCCAGCT
TTCAAAACCCACCATCACAACTCCAAATACCACAAACCGGTTAAACCGGGTCAAGTAATC
ACCGAAGACGGCGACCGTTCCGTCGTCGTTAAAGATTCCGGCGTTTCATATCGTCTCCCT
GGTGCCCCTTTTGATTTCCAGTTCAGTTACTCTGAAACTCCGAAAGCAAAACCGTTGGCT
ATTCGTGAACCGGCTTTTTTACCTTTTGCTCCTCCGACTATGCCTAGACCGTGGACAGGG
AAAGCACCCATGAAGAAAGCTAAGAGAAATATTAAGCTTTTTGAGCCATTGTATCCTCAA
ATGCAGAGTGATGATGATGGGGGTAAGCGCTATGAAATGTTGAGGGCGTATGAGCTGGGG
GTGTTTGAAGGAAAGCCAAAGAAGGTGTTGGGTGCTCCATTGACAAAGATGGAAATTCAA
GAGCTTTTGAAACATTGTATAGCTAGTAATCGACAGGTTAACATTGGTCGGGATGGATTG
GTACATAACATGTTAGAGTTAATACATACTCACTGGAGGAGGAATCCTGTTTGTAAAGTT
CGATGCTTAGGAGTCCCTACTGTTGATATGAACAACCTATGCCAATGTCTCGAGGAGAAG
ACTGGCGGAAAGATCATACATAGAGTGGGTGGTGTAGTTTATCTCTTTCGGGGAAGGTAC
TATGACCAGCATACACGTCCAAAGTACCCACTGATGTTATGGAAACCAGCTACACCAGTT
TACCCAAAACTTATACAGGAAGCACCAGAAGGACTGACCAAAGAAGAGGCTGATGAGTTA
CGAATCAAGGGAAAGAAGCTACCCCCTATCTGTAAATTGGCGAAAAACGGAGTCTACCTT
ACGCTAGTGAGAGACGTGAGAAGTGCCTTTGAAGCTTGTCCATTGGTGAAGATTGATTGC
CGGGGTATGCATGCAAGTGATTATAAGAAGCTAGGAGCTAAGTTAAAGGAATTGGTTCCT
TGTGTGCTATTGTCATTCGATGATGAACAGATATTGATGTGGAGAGGAAAAGACTGGAAA
CCTATGTACGGAAATGGCCCTTCGGCTGTGTCCTCCAGAATTGATGCTGTTGCAGATGAA
ATAAATACTTCAGGACGCTCAGGTATGCATGAAATACTGGCAAATCCAGGAGGCACTGCC
AAAGATTATTCCAACACACACTTGAGAACACGGCGCACAAGCCCTAAAATGATGTCCCTG
TGGAAGAATGCTATTGATTCAGGCAAGGCATTATTGCTAGACGACATTGATCTAAAACCT
GATGATCTCTTGAACAAGGTGGAGGAATTCGCTAGCATTTCACAGGCCATAGAGCACACA
TATCCTGCTCTGGTTTTATCCAGTAAACGCGTCCCTGAACAGTCAGGATCGATGTGGAGA
GGCAGTTCCGATGATGACAATGACAGCGACGATGAGATCAGTGATGGTGATCATGAAGAT
AAATATTACATTAACACCTCATTTGAAGCATTAGAGTCAACAGTTCCTAAAGGATTATTA
CCAGTTGACTTAATAGTAAAGGAGTTCAGTGATGATGAGTAA