Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g065880.2.1
CDS Infomation

RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC)
Sequence

ATGAACAGCCAGCAGCCATACCACCAGCCGGCTACTCTAGAAGAAGTGCGTACCCTTTGG
ATTGGGGATTTACCATACTGGGCTGACGAGTCCTATCTCCATAGCTGGTTTGCTCACACT
GCTGAGGTGCTCTCAATAAAAGTTATCCGCAACAAAATCACTGGCCAACCTGAGGGCTAT
GGATTTGTGGAATTTGGTGCACATGCAGTTGCTGAGCGGATTTTGCAGTCGTATAATGGA
ACTCAAATACCGGGGACAGAGCTAACTTTTAGGTTAAATTGGGCATCATTTGGGATTGGA
GAGCGTCGTGATGCTGGGCCAGAGCATTCTATATTTGTTGGAGATCTAGCTCCTGATGTA
ACAGATTATCTATTGCAAGAGACTTTTCGTACTCACTACCCGTCAGTTAGAGGAGCGAAG
GTTGTTACTGATCCGAATACTGGCCGCACAAAGGGATATGGTTTTGTTAAATTTGCTGAT
GAGACAGAACGAAACCGTGCCATGTCGGAAATGAATGGGATGTATTGCTCAACTAGGCCG
ATGCGCATCAGTGCAGCAACACCAAAAAAGTCGAATACTATCCAACAACAATATGCAGTA
GCAAAAGCAGTATATCCCCCTGCCGTTTATACTCCAACAGTGCAGACTATCCCTGTAGAT
AATGACTTGACTAATACAACAGTTTATGTTGGTAATCTGGATCCTAACTTAACTGAAGAG
GAACTGAGACAAGTATTTTTGCAATTTGGTGAAATTGTTTATGTTAAGATTCCTGCTGCC
AAGGGCTGTGGTTTTGTGCAGTTTTCGGCGAGGCCATCTGCTGAAGAAGCAATCCAGAGA
ATGCAGGGTGCTGTGGTTGGTCAACAAATTGTTCGTGTTTCATGGGGTAGGAGTCCGACA
GCTAAGCAGGACGCTGGTCTATGGGGTCAGCCTGCTGATCCGAGTCAATGGAATGCTTAT
TATGGCTATGGACAAGGTTATGATGCCTATGCTTATGGAGCCACCCAGGATCCTTCACTA
TATGCATATGGTGCATATGCTGGTTATACGCAATACCCTCAACAGGCTGAAGGTGCTCAG
GACTTGGCTTCCATGACTGGTGCTCCTCCAATTATTGAACAAAGAGAAGAGCAGCATGAT
CCTTTGGCTGTGCCAGACGTTGACCGGCTAAATAATGCTTACCTTTCTGTCCATGCAAGC
ACAATCTTGGGCCGGCCATTGTGGCAGAGGACATCATCGTTTTCGCAAGTATAG

Peptide Sequence

PEP ID

Solyc11g065880.2.1
PEP Infomation

RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC)
Sequence

MNSQQPYHQPATLEEVRTLWIGDLPYWADESYLHSWFAHTAEVLSIKVIRNKITGQPEGY
GFVEFGAHAVAERILQSYNGTQIPGTELTFRLNWASFGIGERRDAGPEHSIFVGDLAPDV
TDYLLQETFRTHYPSVRGAKVVTDPNTGRTKGYGFVKFADETERNRAMSEMNGMYCSTRP
MRISAATPKKSNTIQQQYAVAKAVYPPAVYTPTVQTIPVDNDLTNTTVYVGNLDPNLTEE
ELRQVFLQFGEIVYVKIPAAKGCGFVQFSARPSAEEAIQRMQGAVVGQQIVRVSWGRSPT
AKQDAGLWGQPADPSQWNAYYGYGQGYDAYAYGATQDPSLYAYGAYAGYTQYPQQAEGAQ
DLASMTGAPPIIEQREEQHDPLAVPDVDRLNNAYLSVHASTILGRPLWQRTSSFSQV*

Transcript Sequence

Transcript ID

Solyc11g065880.2.1
Transcript Infomation

RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC)
Sequence

TTTTTTTTCTCTTACAATAAATATATGTTGAATTTGTTAAACCCAGCGAAAACACAAAGC
CAAAGATGAACAGCCAGCAGCCATACCACCAGCCGGCTACTCTAGAAGAAGTGCGTACCC
TTTGGATTGGGGATTTACCATACTGGGCTGACGAGTCCTATCTCCATAGCTGGTTTGCTC
ACACTGCTGAGGTGCTCTCAATAAAAGTTATCCGCAACAAAATCACTGGCCAACCTGAGG
GCTATGGATTTGTGGAATTTGGTGCACATGCAGTTGCTGAGCGGATTTTGCAGTCGTATA
ATGGAACTCAAATACCGGGGACAGAGCTAACTTTTAGGTTAAATTGGGCATCATTTGGGA
TTGGAGAGCGTCGTGATGCTGGGCCAGAGCATTCTATATTTGTTGGAGATCTAGCTCCTG
ATGTAACAGATTATCTATTGCAAGAGACTTTTCGTACTCACTACCCGTCAGTTAGAGGAG
CGAAGGTTGTTACTGATCCGAATACTGGCCGCACAAAGGGATATGGTTTTGTTAAATTTG
CTGATGAGACAGAACGAAACCGTGCCATGTCGGAAATGAATGGGATGTATTGCTCAACTA
GGCCGATGCGCATCAGTGCAGCAACACCAAAAAAGTCGAATACTATCCAACAACAATATG
CAGTAGCAAAAGCAGTATATCCCCCTGCCGTTTATACTCCAACAGTGCAGACTATCCCTG
TAGATAATGACTTGACTAATACAACAGTTTATGTTGGTAATCTGGATCCTAACTTAACTG
AAGAGGAACTGAGACAAGTATTTTTGCAATTTGGTGAAATTGTTTATGTTAAGATTCCTG
CTGCCAAGGGCTGTGGTTTTGTGCAGTTTTCGGCGAGGCCATCTGCTGAAGAAGCAATCC
AGAGAATGCAGGGTGCTGTGGTTGGTCAACAAATTGTTCGTGTTTCATGGGGTAGGAGTC
CGACAGCTAAGCAGGACGCTGGTCTATGGGGTCAGCCTGCTGATCCGAGTCAATGGAATG
CTTATTATGGCTATGGACAAGGTTATGATGCCTATGCTTATGGAGCCACCCAGGATCCTT
CACTATATGCATATGGTGCATATGCTGGTTATACGCAATACCCTCAACAGGCTGAAGGTG
CTCAGGACTTGGCTTCCATGACTGGTGCTCCTCCAATTATTGAACAAAGAGAAGAGCAGC
ATGATCCTTTGGCTGTGCCAGACGTTGACCGGCTAAATAATGCTTACCTTTCTGTCCATG
CAAGCACAATCTTGGGCCGGCCATTGTGGCAGAGGACATCATCGTTTTCGCAAGTATAGA
GTTCACCGTTACAGAGATACTGTACCTGTTTGAATTAAGTTCTTGTGGTGTATGTTTATT
GGAAACAAAGACTTGGCCAGCCTTCAAAATGCATGCTGCATTTCAGTCTAACATGCTTAT
GCTACTTTCTGAATTGTTCCTTCAAAATTTCCCTTTTTTATTTCTTCTTATTTCCAGTGT
AATTATAGCCTTGGGGAGTTGGGTGTCTTTCAGTTATCACTAGCCATAGGCTATCTTGCC
TTCAGCACTCTACTTTTCTCAACAGCCAAGAGATGTCTATATTTGTATGCCTGTGGATGA
CCAATTAACATGGAGGAGATGTGGAAGAGTGTATTTTATGCAAAATGAGATGCATACAAA
TGTACAATCGTTGTCCTATGATCATTTACTATAGATAACAAGTATCTTATGGCAAAAATA
TTATAGATAGAAAAATTTCTTCCTCAGTTTGATTCTGAATTTGATTAGTACTTAATTGTC
AGGACCCAAATTTGGTACCTAGGCTGCTATAGGACACCTGACAACCTATTACTCATAAGG
TGAAACTCTCTTAAGTTAAGATGTGCAACAATTACGAATTGAAGGAGGATATTGTCCCCA
ACTCTATGTAGATATAAGTGTGAAAGTTCATGTAAAATATAAGTCTGTCTAAACTATTCC
TAAGTATACACGTTATGGAGCTAATTCAGGTATTCTA