Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g065730.2.1
CDS Infomation	RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT3G20890.1)
Sequence	ATGTATTACAGAGGAAACTACATGGACAGTGGTGATGCCCGTGAAATGGGCTTCAAAAGG CAACGCATAATGGATCAAGGTTCCTCTTATTATGCTACTCCTCCAGGGTCAAGTTATATG TACAATCCTCCTCCTCCTCCACCTCCACCGTCATACTCTTACCATGGACAGCCTCCACCA TTCCCTGTTGTTCGACTCCGTGGCCTCCCATTTGATTGCTCAGAGACTGAGATTGCTGAT TTCTTGCATGGTTTGGACGTAGTTGATGTGCTTCTTGTCCACAAAGGTGGAAGATTTACA GGGGAAGCATACTGTGTTTTGGGGTACCCTCTTCAAGTTGATTTTGCTCTTCAGAGAAAC AGGCAGAATATTGGAAGAAGATATGTTGAGGTTTTCAGAAGCAAGAAGGATGAATACTAT AAGGCTATAGCCAATGAAGTTTATGATTCTCGCGGTGGTTCAGTTCCGAGGGCTAGATCT ATTGATGAAAGCAAAGACCCTGCAGAACACACTGGCGTATTATGGCTGAGGGGATTGCCA TTCTCAGCTACCAAGGAAGATATTATTGATTTCTTTAAAGATTTTGAACTTGAAGAAAAA TCAATCCATATAACAGCTACTTTTGAGGGTAGACCTACAGGGGAAGCATTTGTTGAATTT GCTAGTGCAGATGATTCAAGAGCTGCAATGGCGAAGGACAGGATGACAATAGGGAATCGC TACATAGAGCTTTTCGCTTCATCGTCTGAGGAGTTGGAGGAAGCAGTTTCAAGGGGCAGA GTACTGGACAAACCAGTGGATGGGAGAGACCCGAATGAAGTCACGTCTATTTTGCGGATG AGGGGTTTGCCATTTTCTGCTGGCAAGGATGACATCTTGGATTTCTTCAAAGATTTTGCG TTGAATGAGGATGCAATTCATGTTACATTTCTTTCTGATGGAAGGCCAACTGGAGAAGCT TTTGTAGAGTTCGCAAGCACCGATGATGCAAAAGCAGCCCTGGCAAAGGATAGGATGACA CTTGGAAGTCGTTACGTTGAGCTTTTCCCATCTTCAATCGAGGATATGAATCACGCTGTA TCAAGGGGGCGGTAA

Peptide Sequence

PEP ID	Solyc11g065730.2.1
PEP Infomation	RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT3G20890.1)
Sequence	MYYRGNYMDSGDAREMGFKRQRIMDQGSSYYATPPGSSYMYNPPPPPPPPSYSYHGQPPP FPVVRLRGLPFDCSETEIADFLHGLDVVDVLLVHKGGRFTGEAYCVLGYPLQVDFALQRN RQNIGRRYVEVFRSKKDEYYKAIANEVYDSRGGSVPRARSIDESKDPAEHTGVLWLRGLP FSATKEDIIDFFKDFELEEKSIHITATFEGRPTGEAFVEFASADDSRAAMAKDRMTIGNR YIELFASSSEELEEAVSRGRVLDKPVDGRDPNEVTSILRMRGLPFSAGKDDILDFFKDFA LNEDAIHVTFLSDGRPTGEAFVEFASTDDAKAALAKDRMTLGSRYVELFPSSIEDMNHAV SRGR*

Transcript Sequence

Transcript ID	Solyc11g065730.2.1
Transcript Infomation	RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT3G20890.1)
Sequence	TATTTTCATCGCGAAATAAATGATATTGGACTTTTTCTTCTCAATAGGTAAAAATTAAAA CGACATTGTTTAGAGCTTACTACATAAGTTTGAACCGGGTTACCCCATTTAGCTACATTC GCGAGAGGAAAATCCCAATTTAAGAACCCTACACTTCCCCCCAAAACCCCAATAGACACA GAAAGAGCACTTCACAGATCCATCGGACGCTGAATCAAGATGTATTACAGAGGAAACTAC ATGGACAGTGGTGATGCCCGTGAAATGGGCTTCAAAAGGCAACGCATAATGGATCAAGGT TCCTCTTATTATGCTACTCCTCCAGGGTCAAGTTATATGTACAATCCTCCTCCTCCTCCA CCTCCACCGTCATACTCTTACCATGGACAGCCTCCACCATTCCCTGTTGTTCGACTCCGT GGCCTCCCATTTGATTGCTCAGAGACTGAGATTGCTGATTTCTTGCATGGTTTGGACGTA GTTGATGTGCTTCTTGTCCACAAAGGTGGAAGATTTACAGGGGAAGCATACTGTGTTTTG GGGTACCCTCTTCAAGTTGATTTTGCTCTTCAGAGAAACAGGCAGAATATTGGAAGAAGA TATGTTGAGGTTTTCAGAAGCAAGAAGGATGAATACTATAAGGCTATAGCCAATGAAGTT TATGATTCTCGCGGTGGTTCAGTTCCGAGGGCTAGATCTATTGATGAAAGCAAAGACCCT GCAGAACACACTGGCGTATTATGGCTGAGGGGATTGCCATTCTCAGCTACCAAGGAAGAT ATTATTGATTTCTTTAAAGATTTTGAACTTGAAGAAAAATCAATCCATATAACAGCTACT TTTGAGGGTAGACCTACAGGGGAAGCATTTGTTGAATTTGCTAGTGCAGATGATTCAAGA GCTGCAATGGCGAAGGACAGGATGACAATAGGGAATCGCTACATAGAGCTTTTCGCTTCA TCGTCTGAGGAGTTGGAGGAAGCAGTTTCAAGGGGCAGAGTACTGGACAAACCAGTGGAT GGGAGAGACCCGAATGAAGTCACGTCTATTTTGCGGATGAGGGGTTTGCCATTTTCTGCT GGCAAGGATGACATCTTGGATTTCTTCAAAGATTTTGCGTTGAATGAGGATGCAATTCAT GTTACATTTCTTTCTGATGGAAGGCCAACTGGAGAAGCTTTTGTAGAGTTCGCAAGCACC GATGATGCAAAAGCAGCCCTGGCAAAGGATAGGATGACACTTGGAAGTCGTTACGTTGAG CTTTTCCCATCTTCAATCGAGGATATGAATCACGCTGTATCAAGGGGGCGGTAATAAACT TTATTTTTCCTTGGTTAATAATCATAATGTTGTAACTTGGGGATTTCGTGGTAGTTTTCT GCGAGAAGGACTCTTTATTTTTCACTACAGGAGATAGAAAGAACTTCAGGGAACTTCTGC AGTCATCATCTGTTTGCTCTTAGTTTCATGAGTTTATGGTGTTACTATTTGTGGAAAGTA CTCATTAAACCTTAAACAAGAATATGTTTGCTGCTTGGTACTCTCATGAGTCTTTTTTGA TT