Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g065000.2.1
CDS Infomation

F-box family protein (AHRD V3.3 *** B9HNI4_POPTR)
Sequence

ATGCTTTTCTTATTGATAACTTGCTTTACTTTCATTACTTTCCTTTGTAAGTCTCTTTCC
CTTAAGCCACTTCCTTTATGGAGTAGTTCTGAGGTGAGATTGTTATCAATATGGTTTTGG
AATGATTTCTTGATTTTGAACCCTTTCAAGAAAGGATTTTTAGAATCTTTAATGTCCTCA
AATGTGATGACACTGAGGAGGAAGAGTTTCAGTTATAGAGTAGAGAATGTTGAGGCAAAT
TCTGAAATGTCTGTGTTGGATTTGCCTGAATTGGTTTTGGAATGTATTCTTGAGAGGCTC
CCACCTGAGGGACTTTGTAGTATGGCAAGTGTTTGTAGTTCTTTGAGGGAGAAATGCACA
AGTAAATATCTTTGGGAAAAGCATATGAAAGAAAAATGGGGTAGAGTTCTTGGTCCTGCT
GCTCATAGAGAGTGGTTGTGGCATATTTCTTCAAGAAAGGATTCAAGTTTCTTTAATCAG
GCTAAAGAAAGAGGTTTAATGACTTACCTCTCCCAGTTTTGGCCTATTTCAATCGTTAGA
TCTAATCCTAGCACTAGTTTCAAGAAAAAGGATCCCCCAGTTATTGATTCAATCATGTCT
ATGTATCTTGCTCTTGAATCTGGCAAGTTTTGGTTCCCTGCTCAAGTCTACAATCGCGAG
AATGGGCATGTTGGTTTTATGCTATCTTGCTATGATGCTGAGCTAAGCTATAGTCGAAGA
ACCGACACTTTCCAGGCCAGATATCCTCCACATGGAAGGAGGGCAATGGCAATAGAGACA
GGTGTAACATGGGATAGATTAAGAGTACCTCCTCTTGATACCTCTCCACATGATCTTTAT
ATCTCTGATTGCTTGACTGAATTATGCCCTGGTGATCACATTGAGATTCAATGGAGAAGA
AACAAAGAGTTCCCTTATGGCTGGTGGTATGGTGTTGTAGGCCACTTGGAAACGTGTGAT
GGAAATGAGTATTACTGTCGTTGTCATGAAAATGATACAGTAGTGCTAGAGTTCAACCAG
TATACTCATGGATCGCGGTGGAGGACAACACACATTGATAGGAAAGATCATCGCGAGGAA
GGGAATGAGGCTGATGGATTTTATGGAGGAATCCGGAAACTTCATAGCAATGAAGAGATT
TCTATGTGGAGACGCCTGTGGCCATCCGATGTCTTGGAGTAA

Peptide Sequence

PEP ID

Solyc11g065000.2.1
PEP Infomation

F-box family protein (AHRD V3.3 *** B9HNI4_POPTR)
Sequence

MLFLLITCFTFITFLCKSLSLKPLPLWSSSEVRLLSIWFWNDFLILNPFKKGFLESLMSS
NVMTLRRKSFSYRVENVEANSEMSVLDLPELVLECILERLPPEGLCSMASVCSSLREKCT
SKYLWEKHMKEKWGRVLGPAAHREWLWHISSRKDSSFFNQAKERGLMTYLSQFWPISIVR
SNPSTSFKKKDPPVIDSIMSMYLALESGKFWFPAQVYNRENGHVGFMLSCYDAELSYSRR
TDTFQARYPPHGRRAMAIETGVTWDRLRVPPLDTSPHDLYISDCLTELCPGDHIEIQWRR
NKEFPYGWWYGVVGHLETCDGNEYYCRCHENDTVVLEFNQYTHGSRWRTTHIDRKDHREE
GNEADGFYGGIRKLHSNEEISMWRRLWPSDVLE*

Transcript Sequence

Transcript ID

Solyc11g065000.2.1
Transcript Infomation

F-box family protein (AHRD V3.3 *** B9HNI4_POPTR)
Sequence

AAAAATTGTCGGCTGCCACATGAATTTGAATGAAAGGAAGGAATACCCATATAATTGAAT
TTACTGGTGTAGCCGCTATTTCCTCCCACTTGTTTATGGAGGTGAGTGGCAGCCATTAGA
GGTGTGGGGTGTGGGGTGTGGGGGATATTGCATTGAAATCCACAAAACAGCACAAAAACT
AACCAATCCATGAGCTTCTCTTTTTAACCATTAACCACACATATCATTTTCCTTTGATTT
CTCCTTGGTTCTTGGCCTTAGTACACTTTTTCCAAGATTTCATATTTTTTTTGTTTTTGT
TTTGATGAACAAGAATCTAGGGGTGGGTGATTGAAAAGGGGACAACCCCACTTGGTTAAT
ATACTTTCTCAATCATCCTTCCTTTTCTTCTTCTCCATATTTTCCCTTTTCTTTCATATA
TCAAGATTTGATTTTTCCAAGAAAAGAGCTTGGTGCACAAAAAGTTGGTATTTTGATTAA
AAGGGGTCTTTGTATCTGGACTCATCTCCTCTTTTTTTTCATTATTGAGGGATTTTTCCA
GGTGTCAGAGACCCATATCAGATCTGTGTACAAAAAAAAAATCCATTCTTTAATGTGCAT
ATGGATTCTTGATGTGGGAATATCCATTTTAGAACAACCCTTCTGTTTGTATGCACATAA
ATAGAGGGTAATCTTCTATTTTCCCCATTAGCTATTTTATGTGAACACAATTATCCATTG
TTTCCATTTTCCTTAAAAGGGTATATAGTTATAGAGTTTGTTTAGTCAGTCTTGTTAGAG
TTTTGGCGAGGCCCACAGTTTGTTTTGGTGGGCTTCGTCAAGCTAATAGAAGTATAATAT
CTGTATTTTGTTGAGGAAAGGGGAGGGGGGGGGGGTATTAGTTTAGTTTTATATAATTGT
TACAGGAGAAAGAGTAAAACAAATGAGTTGAGTTTCTACTTATTTTACTAACCTTGCTTT
TAACATATAATTGGTCACCTAACTTTTGATCTTTTTACCCCACATGATTTATGCTTAAAT
TGATTAACTTTTTTTTCAACTTTAACAAATGCTTTTCTTATTGATAACTTGCTTTACTTT
CATTACTTTCCTTTGTAAGTCTCTTTCCCTTAAGCCACTTCCTTTATGGAGTAGTTCTGA
GGTGAGATTGTTATCAATATGGTTTTGGAATGATTTCTTGATTTTGAACCCTTTCAAGAA
AGGATTTTTAGAATCTTTAATGTCCTCAAATGTGATGACACTGAGGAGGAAGAGTTTCAG
TTATAGAGTAGAGAATGTTGAGGCAAATTCTGAAATGTCTGTGTTGGATTTGCCTGAATT
GGTTTTGGAATGTATTCTTGAGAGGCTCCCACCTGAGGGACTTTGTAGTATGGCAAGTGT
TTGTAGTTCTTTGAGGGAGAAATGCACAAGTAAATATCTTTGGGAAAAGCATATGAAAGA
AAAATGGGGTAGAGTTCTTGGTCCTGCTGCTCATAGAGAGTGGTTGTGGCATATTTCTTC
AAGAAAGGATTCAAGTTTCTTTAATCAGGCTAAAGAAAGAGGTTTAATGACTTACCTCTC
CCAGTTTTGGCCTATTTCAATCGTTAGATCTAATCCTAGCACTAGTTTCAAGAAAAAGGA
TCCCCCAGTTATTGATTCAATCATGTCTATGTATCTTGCTCTTGAATCTGGCAAGTTTTG
GTTCCCTGCTCAAGTCTACAATCGCGAGAATGGGCATGTTGGTTTTATGCTATCTTGCTA
TGATGCTGAGCTAAGCTATAGTCGAAGAACCGACACTTTCCAGGCCAGATATCCTCCACA
TGGAAGGAGGGCAATGGCAATAGAGACAGGTGTAACATGGGATAGATTAAGAGTACCTCC
TCTTGATACCTCTCCACATGATCTTTATATCTCTGATTGCTTGACTGAATTATGCCCTGG
TGATCACATTGAGATTCAATGGAGAAGAAACAAAGAGTTCCCTTATGGCTGGTGGTATGG
TGTTGTAGGCCACTTGGAAACGTGTGATGGAAATGAGTATTACTGTCGTTGTCATGAAAA
TGATACAGTAGTGCTAGAGTTCAACCAGTATACTCATGGATCGCGGTGGAGGACAACACA
CATTGATAGGAAAGATCATCGCGAGGAAGGGAATGAGGCTGATGGATTTTATGGAGGAAT
CCGGAAACTTCATAGCAATGAAGAGATTTCTATGTGGAGACGCCTGTGGCCATCCGATGT
CTTGGAGTAAGTTGCAAGCTCACCATTGTTGGCAAAAACCACATTTGTACCTTCAGAATG
TGAGGAAGTTAACACCTGAACTTGGAAGTAAGCCATTTTCAGTATACCACTTCGACTTCT
ATTGTTTTGTGATCAGTGGGGGGAGTTATTTCGACACTGATCCTACTTGTTTGTAAAATG
ATTACCACGTTTACAGATCGATTTGTTTAGTAAAATCTATTAAAGCTCTAGTTAACTTCT
TGTACTAAGGAATTAGATTGTTGATCCACCTTAATGGTTTCTGTTGATCAGTGAAAGGAA
AGAAGCCTGGTTATTGGAATACTTAATAAGTTTATGTTCTAATATAAACTACAACTGTAA
AAACTTATTTTTCTTTTGATTAATAAAAAGATAGAATTTTTGTTTTTCTATTT