Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g064900.2.1
CDS Infomation

Calcium-dependent protein kinase, putative (AHRD V3.3 *** B9SJ93_RICCO)
Sequence

ATGGGGAACTGTTGTTCAAGGGGCCAACCTAATAATGATGATGATCATCATATTATGAGT
AAAGAAAAATCCAATGATAATGATCAATCAAAAAGTTGTAATAATAATAATAATACTACA
CCACCAAAATCTCCTGACCCTTCTTCAAAACCATCTAAAAAATCCCCTATAGGTCCAGTA
TTAGGAAGACCAATGGAAGATGTTAAAAAGACATATTCAATAGGTAAAGAATTAGGAAGG
GGTCAATTTGGTGTAACACATTTATGTACACATAAACAAAATGGTGAACAATTTGCATGC
AAAACAATAGCAAAAAGGAAATTGGTTAATAAAGAAGATATTGAAGATGTTAAAAGGGAA
GTACAAATAATGCATCATTTAACAGGTCAACAAAATATTGTTGAACTTAAAGGTGCTTAT
GAGGACAAACATTCAGTACATTTGGTTATGGAATTATGTGCTGGTGGTGAACTTTTTGAT
AGGATTATTACTAAAGGACATTATACTGAAAGGGCTGCTGCTACTTTGCTTAGAACTATT
GTTCAAATTGTACATACTTGTCATTCTATGGGTGTTATTCATAGAGATCTCAAGCCTGAG
AATTTTCTTCTTCTTAATAAAGATGAGGATTCACCTCTCAAGGCTACCGATTTCGGTCTT
TCCGTCTTTTATAAACAAGGAGATGTGTTTAAGGACATAGTGGGTAGTGCATATTACATT
GCACCTGAAGTGTTGAAGAGAAGATATGGTCCAGAAGTTGATATATGGAGTGTTGGGGTT
ATGTTATATATTCTTCTTTCTGGTGTTCCTCCTTTTTGGGCAGAAACTGAACATGGAATA
TTCAATGCAATATTGCGTGGACATATTGATTTTTCAAGTGATCCATGGCCTTCAATTTCA
CATGGTGCCAAAGATATTGTTAGGAAAATGTTGACTTCAGATCCCAAACAGAGGTTAACA
GCAATCCAAGTGTTAAATCATCCATGGATCAAGGAGGATGGAGATGCACCAGATACACCA
CTTGACAATGCTGTTTTAAGTAGACTCAAACAATTTAGAGCCATGAACAATTTCAAGAAA
GTTGCTCTCCGGGTTATTGCAGGATGTTTATCAGAGGAAGAAATAATGGGATTAAAGCAA
ATGTTCAAAAGTATGGATGCTGATAATAGTGGAGCAATAACACTTGAGGAGCTAAAACAA
GGACTTGCCAAACAAGGAACTAAATTATCTGATTATGAAATTCAACAATTAATGGAAGCT
GCTGATGCTGATGGAAATGGAACCATAGATTATGAAGAATTTATTACAGCAACAATGCAC
ATGAACAGAATGGACAAAGAAGAACATCTTTACACAGCATTCCAATATTTTGACAAGGAT
AATAGTGGGTACATCACAATAGAAGAGTTAGAGCAAGCTTTAAGAGAATTTGGTATTGAT
GATGGAAAGGACATACAAGATATTGTTGCTGAAGTTGACTCAAATAATGATGGTCGAATT
AATTATGATGAATTTGCAGCTATGATGAGAAAAGGAAGTCCAGAAACAACAGCAAATATA
AAAAAAAGAAGGGAGTCATTTGTCGTATAA

Peptide Sequence

PEP ID

Solyc11g064900.2.1
PEP Infomation

Calcium-dependent protein kinase, putative (AHRD V3.3 *** B9SJ93_RICCO)
Sequence

MGNCCSRGQPNNDDDHHIMSKEKSNDNDQSKSCNNNNNTTPPKSPDPSSKPSKKSPIGPV
LGRPMEDVKKTYSIGKELGRGQFGVTHLCTHKQNGEQFACKTIAKRKLVNKEDIEDVKRE
VQIMHHLTGQQNIVELKGAYEDKHSVHLVMELCAGGELFDRIITKGHYTERAAATLLRTI
VQIVHTCHSMGVIHRDLKPENFLLLNKDEDSPLKATDFGLSVFYKQGDVFKDIVGSAYYI
APEVLKRRYGPEVDIWSVGVMLYILLSGVPPFWAETEHGIFNAILRGHIDFSSDPWPSIS
HGAKDIVRKMLTSDPKQRLTAIQVLNHPWIKEDGDAPDTPLDNAVLSRLKQFRAMNNFKK
VALRVIAGCLSEEEIMGLKQMFKSMDADNSGAITLEELKQGLAKQGTKLSDYEIQQLMEA
ADADGNGTIDYEEFITATMHMNRMDKEEHLYTAFQYFDKDNSGYITIEELEQALREFGID
DGKDIQDIVAEVDSNNDGRINYDEFAAMMRKGSPETTANIKKRRESFVV*

Transcript Sequence

Transcript ID

Solyc11g064900.2.1
Transcript Infomation

Calcium-dependent protein kinase, putative (AHRD V3.3 *** B9SJ93_RICCO)
Sequence

ATGGGGAACTGTTGTTCAAGGGGCCAACCTAATAATGATGATGATCATCATATTATGAGT
AAAGAAAAATCCAATGATAATGATCAATCAAAAAGTTGTAATAATAATAATAATACTACA
CCACCAAAATCTCCTGACCCTTCTTCAAAACCATCTAAAAAATCCCCTATAGGTCCAGTA
TTAGGAAGACCAATGGAAGATGTTAAAAAGACATATTCAATAGGTAAAGAATTAGGAAGG
GGTCAATTTGGTGTAACACATTTATGTACACATAAACAAAATGGTGAACAATTTGCATGC
AAAACAATAGCAAAAAGGAAATTGGTTAATAAAGAAGATATTGAAGATGTTAAAAGGGAA
GTACAAATAATGCATCATTTAACAGGTCAACAAAATATTGTTGAACTTAAAGGTGCTTAT
GAGGACAAACATTCAGTACATTTGGTTATGGAATTATGTGCTGGTGGTGAACTTTTTGAT
AGGATTATTACTAAAGGACATTATACTGAAAGGGCTGCTGCTACTTTGCTTAGAACTATT
GTTCAAATTGTACATACTTGTCATTCTATGGGTGTTATTCATAGAGATCTCAAGCCTGAG
AATTTTCTTCTTCTTAATAAAGATGAGGATTCACCTCTCAAGGCTACCGATTTCGGTCTT
TCCGTCTTTTATAAACAAGGAGATGTGTTTAAGGACATAGTGGGTAGTGCATATTACATT
GCACCTGAAGTGTTGAAGAGAAGATATGGTCCAGAAGTTGATATATGGAGTGTTGGGGTT
ATGTTATATATTCTTCTTTCTGGTGTTCCTCCTTTTTGGGCAGAAACTGAACATGGAATA
TTCAATGCAATATTGCGTGGACATATTGATTTTTCAAGTGATCCATGGCCTTCAATTTCA
CATGGTGCCAAAGATATTGTTAGGAAAATGTTGACTTCAGATCCCAAACAGAGGTTAACA
GCAATCCAAGTGTTAAATCATCCATGGATCAAGGAGGATGGAGATGCACCAGATACACCA
CTTGACAATGCTGTTTTAAGTAGACTCAAACAATTTAGAGCCATGAACAATTTCAAGAAA
GTTGCTCTCCGGGTTATTGCAGGATGTTTATCAGAGGAAGAAATAATGGGATTAAAGCAA
ATGTTCAAAAGTATGGATGCTGATAATAGTGGAGCAATAACACTTGAGGAGCTAAAACAA
GGACTTGCCAAACAAGGAACTAAATTATCTGATTATGAAATTCAACAATTAATGGAAGCT
GCTGATGCTGATGGAAATGGAACCATAGATTATGAAGAATTTATTACAGCAACAATGCAC
ATGAACAGAATGGACAAAGAAGAACATCTTTACACAGCATTCCAATATTTTGACAAGGAT
AATAGTGGGTACATCACAATAGAAGAGTTAGAGCAAGCTTTAAGAGAATTTGGTATTGAT
GATGGAAAGGACATACAAGATATTGTTGCTGAAGTTGACTCAAATAATGATGGTCGAATT
AATTATGATGAATTTGCAGCTATGATGAGAAAAGGAAGTCCAGAAACAACAGCAAATATA
AAAAAAAGAAGGGAGTCATTTGTCGTATAAATTTTCATAGTGAATATTTTTTA